Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0347:0346
Extra
PDB:
ATOM 1 O3' G A 346 59.079 123.301 8.599 1.00 78.22 O
ATOM 2 P U A 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 3 OP1 U A 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 4 OP2 U A 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 5 O5' U A 347 59.137 120.831 8.128 1.00 78.36 O
ATOM 6 C5' U A 347 59.167 120.113 9.382 1.00 75.62 C
ATOM 7 C4' U A 347 57.817 119.482 9.655 1.00 74.59 C
ATOM 8 O4' U A 347 56.859 120.517 9.985 1.00 73.86 O
ATOM 9 C3' U A 347 57.184 118.736 8.489 1.00 74.85 C
ATOM 10 O3' U A 347 57.693 117.404 8.397 1.00 77.40 O
ATOM 11 C2' U A 347 55.695 118.782 8.825 1.00 73.43 C
ATOM 12 O2' U A 347 55.279 117.786 9.737 1.00 72.64 O
ATOM 13 C1' U A 347 55.577 120.148 9.508 1.00 72.36 C
ATOM 14 N1 U A 347 55.037 121.244 8.687 1.00 70.87 N
ATOM 15 C2 U A 347 53.685 121.218 8.395 1.00 70.25 C
ATOM 16 O2 U A 347 52.947 120.313 8.746 1.00 71.19 O
ATOM 17 N3 U A 347 53.227 122.291 7.672 1.00 70.10 N
ATOM 18 C4 U A 347 53.963 123.363 7.214 1.00 70.05 C
ATOM 19 O4 U A 347 53.392 124.271 6.606 1.00 70.30 O
ATOM 20 C5 U A 347 55.358 123.309 7.535 1.00 69.62 C
ATOM 21 C6 U A 347 55.836 122.278 8.239 1.00 70.14 C
ATOM 22 P A A 348 57.770 116.666 6.967 1.00 78.45 P
ATOM 23 OP1 A A 348 58.425 115.349 7.192 1.00 78.86 O
ATOM 24 OP2 A A 348 58.346 117.605 5.975 1.00 78.04 O
ATOM 25 O5' A A 348 56.244 116.414 6.586 1.00 77.98 O
TER
ATOM 1 O3' A B 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 2 P G B 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 3 OP1 G B 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 4 OP2 G B 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 5 O5' G B 346 59.237 125.413 12.133 1.00 73.72 O
ATOM 6 C5' G B 346 59.001 126.181 10.937 1.00 75.45 C
ATOM 7 C4' G B 346 58.568 125.272 9.808 1.00 76.42 C
ATOM 8 O4' G B 346 57.817 126.035 8.826 1.00 76.23 O
ATOM 9 C3' G B 346 59.659 124.542 9.028 1.00 76.69 C
ATOM 10 O3' G B 346 59.079 123.301 8.599 1.00 78.22 O
ATOM 11 C2' G B 346 59.872 125.491 7.850 1.00 76.73 C
ATOM 12 O2' G B 346 60.481 124.907 6.718 1.00 77.11 O
ATOM 13 C1' G B 346 58.426 125.898 7.561 1.00 76.39 C
ATOM 14 N9 G B 346 58.212 127.135 6.819 1.00 76.15 N
ATOM 15 C8 G B 346 59.105 128.158 6.602 1.00 77.26 C
ATOM 16 N7 G B 346 58.601 129.136 5.900 1.00 77.80 N
ATOM 17 C5 G B 346 57.299 128.734 5.637 1.00 77.46 C
ATOM 18 C6 G B 346 56.269 129.381 4.913 1.00 78.16 C
ATOM 19 O6 G B 346 56.304 130.477 4.337 1.00 79.80 O
ATOM 20 N1 G B 346 55.101 128.621 4.894 1.00 77.93 N
ATOM 21 C2 G B 346 54.946 127.395 5.496 1.00 76.67 C
ATOM 22 N2 G B 346 53.740 126.820 5.373 1.00 74.90 N
ATOM 23 N3 G B 346 55.903 126.780 6.170 1.00 76.05 N
ATOM 24 C4 G B 346 57.044 127.501 6.199 1.00 76.42 C
ATOM 25 P U B 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 26 OP1 U B 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 27 OP2 U B 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 28 O5' U B 347 59.137 120.831 8.128 1.00 78.36 O
TER
ATOM 2 P U A 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 3 OP1 U A 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 4 OP2 U A 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 5 O5' U A 347 59.137 120.831 8.128 1.00 78.36 O
ATOM 6 C5' U A 347 59.167 120.113 9.382 1.00 75.62 C
ATOM 7 C4' U A 347 57.817 119.482 9.655 1.00 74.59 C
ATOM 8 O4' U A 347 56.859 120.517 9.985 1.00 73.86 O
ATOM 9 C3' U A 347 57.184 118.736 8.489 1.00 74.85 C
ATOM 10 O3' U A 347 57.693 117.404 8.397 1.00 77.40 O
ATOM 11 C2' U A 347 55.695 118.782 8.825 1.00 73.43 C
ATOM 12 O2' U A 347 55.279 117.786 9.737 1.00 72.64 O
ATOM 13 C1' U A 347 55.577 120.148 9.508 1.00 72.36 C
ATOM 14 N1 U A 347 55.037 121.244 8.687 1.00 70.87 N
ATOM 15 C2 U A 347 53.685 121.218 8.395 1.00 70.25 C
ATOM 16 O2 U A 347 52.947 120.313 8.746 1.00 71.19 O
ATOM 17 N3 U A 347 53.227 122.291 7.672 1.00 70.10 N
ATOM 18 C4 U A 347 53.963 123.363 7.214 1.00 70.05 C
ATOM 19 O4 U A 347 53.392 124.271 6.606 1.00 70.30 O
ATOM 20 C5 U A 347 55.358 123.309 7.535 1.00 69.62 C
ATOM 21 C6 U A 347 55.836 122.278 8.239 1.00 70.14 C
ATOM 22 P A A 348 57.770 116.666 6.967 1.00 78.45 P
ATOM 23 OP1 A A 348 58.425 115.349 7.192 1.00 78.86 O
ATOM 24 OP2 A A 348 58.346 117.605 5.975 1.00 78.04 O
ATOM 25 O5' A A 348 56.244 116.414 6.586 1.00 77.98 O
TER
ATOM 1 O3' A B 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 2 P G B 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 3 OP1 G B 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 4 OP2 G B 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 5 O5' G B 346 59.237 125.413 12.133 1.00 73.72 O
ATOM 6 C5' G B 346 59.001 126.181 10.937 1.00 75.45 C
ATOM 7 C4' G B 346 58.568 125.272 9.808 1.00 76.42 C
ATOM 8 O4' G B 346 57.817 126.035 8.826 1.00 76.23 O
ATOM 9 C3' G B 346 59.659 124.542 9.028 1.00 76.69 C
ATOM 10 O3' G B 346 59.079 123.301 8.599 1.00 78.22 O
ATOM 11 C2' G B 346 59.872 125.491 7.850 1.00 76.73 C
ATOM 12 O2' G B 346 60.481 124.907 6.718 1.00 77.11 O
ATOM 13 C1' G B 346 58.426 125.898 7.561 1.00 76.39 C
ATOM 14 N9 G B 346 58.212 127.135 6.819 1.00 76.15 N
ATOM 15 C8 G B 346 59.105 128.158 6.602 1.00 77.26 C
ATOM 16 N7 G B 346 58.601 129.136 5.900 1.00 77.80 N
ATOM 17 C5 G B 346 57.299 128.734 5.637 1.00 77.46 C
ATOM 18 C6 G B 346 56.269 129.381 4.913 1.00 78.16 C
ATOM 19 O6 G B 346 56.304 130.477 4.337 1.00 79.80 O
ATOM 20 N1 G B 346 55.101 128.621 4.894 1.00 77.93 N
ATOM 21 C2 G B 346 54.946 127.395 5.496 1.00 76.67 C
ATOM 22 N2 G B 346 53.740 126.820 5.373 1.00 74.90 N
ATOM 23 N3 G B 346 55.903 126.780 6.170 1.00 76.05 N
ATOM 24 C4 G B 346 57.044 127.501 6.199 1.00 76.42 C
ATOM 25 P U B 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 26 OP1 U B 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 27 OP2 U B 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 28 O5' U B 347 59.137 120.831 8.128 1.00 78.36 O
TER
Atoms:
C4: (53.963,123.363,7.214)
N3: (53.227,122.291,7.672)
OP1: (61.294,122.036,8.597)
OP2: (59.950,122.430,6.436)
C2: (53.685,121.218,8.395)
C1': (55.577,120.148,9.508)
C3': (57.184,118.736,8.489)
O5': (59.137,120.831,8.128)
O4': (56.859,120.517,9.985)
C5': (59.167,120.113,9.382)
P: (59.982,122.165,7.900)
C4': (57.817,119.482,9.655)
C2': (55.695,118.782,8.825)
O2': (55.279,117.786,9.737)
N1: (55.037,121.244,8.687)
O4: (53.392,124.271,6.606)
O2: (52.947,120.313,8.746)
C6: (55.836,122.278,8.239)
C5: (55.358,123.309,7.535)
O3': (57.693,117.404,8.397)
N3: (53.227,122.291,7.672)
OP1: (61.294,122.036,8.597)
OP2: (59.950,122.430,6.436)
C2: (53.685,121.218,8.395)
C1': (55.577,120.148,9.508)
C3': (57.184,118.736,8.489)
O5': (59.137,120.831,8.128)
O4': (56.859,120.517,9.985)
C5': (59.167,120.113,9.382)
P: (59.982,122.165,7.900)
C4': (57.817,119.482,9.655)
C2': (55.695,118.782,8.825)
O2': (55.279,117.786,9.737)
N1: (55.037,121.244,8.687)
O4: (53.392,124.271,6.606)
O2: (52.947,120.313,8.746)
C6: (55.836,122.278,8.239)
C5: (55.358,123.309,7.535)
O3': (57.693,117.404,8.397)
OP1: (58.479,124.202,14.156)
OP2: (58.023,126.714,13.907)
C3': (59.659,124.542,9.028)
C1': (58.426,125.898,7.561)
C5': (59.001,126.181,10.937)
O6: (56.304,130.477,4.337)
O4': (57.817,126.035,8.826)
C8: (59.105,128.158,6.602)
C2: (54.946,127.395,5.496)
C6: (56.269,129.381,4.913)
C5: (57.299,128.734,5.637)
C4: (57.044,127.501,6.199)
P: (58.149,125.366,13.300)
C4': (58.568,125.272,9.808)
C2': (59.872,125.491,7.850)
O2': (60.481,124.907,6.718)
N1: (55.101,128.621,4.894)
N2: (53.740,126.820,5.373)
N3: (55.903,126.780,6.170)
N7: (58.601,129.136,5.900)
N9: (58.212,127.135,6.819)
O5': (59.237,125.413,12.133)
O3': (59.079,123.301,8.599)
OP2: (58.023,126.714,13.907)
C3': (59.659,124.542,9.028)
C1': (58.426,125.898,7.561)
C5': (59.001,126.181,10.937)
O6: (56.304,130.477,4.337)
O4': (57.817,126.035,8.826)
C8: (59.105,128.158,6.602)
C2: (54.946,127.395,5.496)
C6: (56.269,129.381,4.913)
C5: (57.299,128.734,5.637)
C4: (57.044,127.501,6.199)
P: (58.149,125.366,13.300)
C4': (58.568,125.272,9.808)
C2': (59.872,125.491,7.850)
O2': (60.481,124.907,6.718)
N1: (55.101,128.621,4.894)
N2: (53.740,126.820,5.373)
N3: (55.903,126.780,6.170)
N7: (58.601,129.136,5.900)
N9: (58.212,127.135,6.819)
O5': (59.237,125.413,12.133)
O3': (59.079,123.301,8.599)
Image (generated by PyMOL):