ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:978:977

Extra

PDB:
ATOM 1 O3' G A 77 38.949 64.739 122.478 1.00 52.69 O
ATOM 2 P U A 78 39.097 66.313 122.189 1.00 52.89 P
ATOM 3 OP1 U A 78 38.074 67.060 122.975 1.00 50.52 O
ATOM 4 OP2 U A 78 39.172 66.502 120.712 1.00 52.88 O
ATOM 5 O5' U A 78 40.536 66.643 122.778 1.00 50.95 O
ATOM 6 C5' U A 78 40.764 66.680 124.191 1.00 51.32 C
ATOM 7 C4' U A 78 42.139 66.150 124.500 1.00 50.82 C
ATOM 8 O4' U A 78 42.177 64.727 124.244 1.00 50.86 O
ATOM 9 C3' U A 78 43.244 66.712 123.632 1.00 51.05 C
ATOM 10 O3' U A 78 43.676 67.971 124.125 1.00 52.58 O
ATOM 11 C2' U A 78 44.312 65.633 123.724 1.00 51.11 C
ATOM 12 O2' U A 78 45.072 65.717 124.918 1.00 51.51 O
ATOM 13 C1' U A 78 43.451 64.365 123.746 1.00 49.22 C
ATOM 14 N1 U A 78 43.265 63.699 122.447 1.00 48.08 N
ATOM 15 C2 U A 78 44.397 63.256 121.778 1.00 48.99 C
ATOM 16 O2 U A 78 45.533 63.430 122.202 1.00 50.63 O
ATOM 17 N3 U A 78 44.152 62.601 120.594 1.00 48.21 N
ATOM 18 C4 U A 78 42.922 62.354 120.016 1.00 48.68 C
ATOM 19 O4 U A 78 42.869 61.738 118.949 1.00 48.41 O
ATOM 20 C5 U A 78 41.799 62.861 120.754 1.00 47.27 C
ATOM 21 C6 U A 78 42.004 63.501 121.912 1.00 47.48 C
ATOM 22 P A A 79 43.896 69.184 123.100 1.00 52.71 P
ATOM 23 OP1 A A 79 44.311 70.383 123.884 1.00 51.41 O
ATOM 24 OP2 A A 79 42.698 69.261 122.225 1.00 53.79 O
ATOM 25 O5' A A 79 45.117 68.677 122.210 1.00 52.25 O
TER

ATOM 1 O3' A B 76 39.554 60.737 124.925 1.00 56.78 O
ATOM 2 P G B 77 38.109 60.397 125.541 1.00 57.93 P
ATOM 3 OP1 G B 77 37.905 61.342 126.685 1.00 54.99 O
ATOM 4 OP2 G B 77 38.014 58.918 125.768 1.00 55.86 O
ATOM 5 O5' G B 77 37.108 60.794 124.363 1.00 55.35 O
ATOM 6 C5' G B 77 36.829 62.172 124.068 1.00 52.96 C
ATOM 7 C4' G B 77 37.872 62.720 123.129 1.00 51.27 C
ATOM 8 O4' G B 77 37.885 61.934 121.903 1.00 51.00 O
ATOM 9 C3' G B 77 37.661 64.164 122.684 1.00 51.69 C
ATOM 10 O3' G B 77 38.949 64.739 122.478 1.00 52.69 O
ATOM 11 C2' G B 77 36.970 63.988 121.341 1.00 50.99 C
ATOM 12 O2' G B 77 37.102 65.114 120.504 1.00 53.35 O
ATOM 13 C1' G B 77 37.755 62.802 120.798 1.00 49.83 C
ATOM 14 N9 G B 77 37.190 62.072 119.667 1.00 48.37 N
ATOM 15 C8 G B 77 35.862 61.875 119.363 1.00 48.07 C
ATOM 16 N7 G B 77 35.686 61.161 118.281 1.00 48.25 N
ATOM 17 C5 G B 77 36.973 60.866 117.847 1.00 47.12 C
ATOM 18 C6 G B 77 37.418 60.105 116.734 1.00 47.64 C
ATOM 19 O6 G B 77 36.747 59.509 115.885 1.00 50.78 O
ATOM 20 N1 G B 77 38.804 60.065 116.661 1.00 48.31 N
ATOM 21 C2 G B 77 39.660 60.672 117.540 1.00 48.47 C
ATOM 22 N2 G B 77 40.970 60.509 117.284 1.00 47.23 N
ATOM 23 N3 G B 77 39.262 61.383 118.589 1.00 48.37 N
ATOM 24 C4 G B 77 37.913 61.432 118.682 1.00 47.87 C
ATOM 25 P U B 78 39.097 66.313 122.189 1.00 52.89 P
ATOM 26 OP1 U B 78 38.074 67.060 122.975 1.00 50.52 O
ATOM 27 OP2 U B 78 39.172 66.502 120.712 1.00 52.88 O
ATOM 28 O5' U B 78 40.536 66.643 122.778 1.00 50.95 O
TER

Atoms:
C4: (42.922,62.354,120.016)
N3: (44.152,62.601,120.594)
OP1: (38.074,67.060,122.975)
OP2: (39.172,66.502,120.712)
C2: (44.397,63.256,121.778)
C1': (43.451,64.365,123.746)
C3': (43.244,66.712,123.632)
O5': (40.536,66.643,122.778)
O4': (42.177,64.727,124.244)
C5': (40.764,66.680,124.191)
P: (39.097,66.313,122.189)
C4': (42.139,66.150,124.500)
C2': (44.312,65.633,123.724)
O2': (45.072,65.717,124.918)
N1: (43.265,63.699,122.447)
O4: (42.869,61.738,118.949)
O2: (45.533,63.430,122.202)
C6: (42.004,63.501,121.912)
C5: (41.799,62.861,120.754)
O3': (43.676,67.971,124.125)
OP1: (37.905,61.342,126.685)
OP2: (38.014,58.918,125.768)
C3': (37.661,64.164,122.684)
C1': (37.755,62.802,120.798)
C5': (36.829,62.172,124.068)
O6: (36.747,59.509,115.885)
O4': (37.885,61.934,121.903)
C8: (35.862,61.875,119.363)
C2: (39.660,60.672,117.540)
C6: (37.418,60.105,116.734)
C5: (36.973,60.866,117.847)
C4: (37.913,61.432,118.682)
P: (38.109,60.397,125.541)
C4': (37.872,62.720,123.129)
C2': (36.970,63.988,121.341)
O2': (37.102,65.114,120.504)
N1: (38.804,60.065,116.661)
N2: (40.970,60.509,117.284)
N3: (39.262,61.383,118.589)
N7: (35.686,61.161,118.281)
N9: (37.190,62.072,119.667)
O5': (37.108,60.794,124.363)
O3': (38.949,64.739,122.478)
Image (generated by PyMOL):
PyMOL image
show in jmol