ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5945:5944

Extra

PDB:
ATOM 1 O3' G A 944 139.835 -35.410 273.044 1.00 37.50 O
ATOM 2 P U A 945 140.696 -34.471 272.100 1.00 42.94 P
ATOM 3 OP1 U A 945 140.878 -35.227 270.894 1.00 42.98 O
ATOM 4 OP2 U A 945 141.895 -34.017 272.858 1.00 42.85 O
ATOM 5 O5' U A 945 139.741 -33.240 271.868 1.00 42.71 O
ATOM 6 C5' U A 945 139.487 -32.359 272.945 1.00 42.64 C
ATOM 7 C4' U A 945 138.499 -31.272 272.600 1.00 42.45 C
ATOM 8 O4' U A 945 137.203 -31.853 272.295 1.00 42.63 O
ATOM 9 C3' U A 945 138.232 -30.321 273.732 1.00 42.40 C
ATOM 10 O3' U A 945 139.138 -29.253 273.758 1.00 42.14 O
ATOM 11 C2' U A 945 136.778 -29.921 273.550 1.00 42.41 C
ATOM 12 O2' U A 945 136.637 -28.900 272.590 1.00 42.13 O
ATOM 13 C1' U A 945 136.184 -31.193 272.989 1.00 42.64 C
ATOM 14 N1 U A 945 135.733 -32.073 274.047 1.00 42.96 N
ATOM 15 C2 U A 945 134.766 -31.604 274.849 1.00 43.03 C
ATOM 16 O2 U A 945 134.269 -30.518 274.692 1.00 42.84 O
ATOM 17 N3 U A 945 134.380 -32.408 275.848 1.00 43.34 N
ATOM 18 C4 U A 945 134.867 -33.631 276.116 1.00 43.59 C
ATOM 19 O4 U A 945 134.402 -34.259 277.081 1.00 43.87 O
ATOM 20 C5 U A 945 135.873 -34.067 275.196 1.00 43.49 C
ATOM 21 C6 U A 945 136.269 -33.295 274.210 1.00 43.19 C
ATOM 22 P A A 946 139.650 -28.711 275.152 1.00 45.74 P
ATOM 23 OP1 A A 946 140.628 -27.655 274.901 1.00 45.46 O
ATOM 24 OP2 A A 946 140.067 -29.874 275.954 1.00 46.02 O
ATOM 25 O5' A A 946 138.309 -28.106 275.744 1.00 45.78 O
TER

ATOM 1 O3' G B 943 135.908 -39.704 270.425 1.00 41.33 O
ATOM 2 P G B 944 137.485 -40.047 270.434 1.00 38.49 P
ATOM 3 OP1 G B 944 137.936 -40.066 269.014 1.00 38.35 O
ATOM 4 OP2 G B 944 137.693 -41.259 271.278 1.00 38.84 O
ATOM 5 O5' G B 944 138.120 -38.832 271.182 1.00 38.22 O
ATOM 6 C5' G B 944 137.934 -37.527 270.736 1.00 37.88 C
ATOM 7 C4' G B 944 138.113 -36.588 271.874 1.00 37.76 C
ATOM 8 O4' G B 944 137.110 -36.912 272.853 1.00 38.00 O
ATOM 9 C3' G B 944 139.449 -36.690 272.588 1.00 37.77 C
ATOM 10 O3' G B 944 139.835 -35.410 273.044 1.00 37.50 O
ATOM 11 C2' G B 944 139.154 -37.561 273.791 1.00 38.10 C
ATOM 12 O2' G B 944 139.939 -37.245 274.903 1.00 38.10 O
ATOM 13 C1' G B 944 137.696 -37.255 274.078 1.00 38.16 C
ATOM 14 N9 G B 944 136.953 -38.383 274.588 1.00 38.53 N
ATOM 15 C8 G B 944 137.032 -39.633 274.072 1.00 38.76 C
ATOM 16 N7 G B 944 136.241 -40.434 274.684 1.00 39.08 N
ATOM 17 C5 G B 944 135.608 -39.648 275.618 1.00 39.04 C
ATOM 18 C6 G B 944 134.632 -39.974 276.576 1.00 39.31 C
ATOM 19 O6 G B 944 134.132 -41.074 276.771 1.00 39.64 O
ATOM 20 N1 G B 944 134.197 -38.945 277.368 1.00 39.20 N
ATOM 21 C2 G B 944 134.675 -37.703 277.229 1.00 38.85 C
ATOM 22 N2 G B 944 134.099 -36.842 278.098 1.00 38.81 N
ATOM 23 N3 G B 944 135.633 -37.357 276.334 1.00 38.59 N
ATOM 24 C4 G B 944 136.033 -38.376 275.566 1.00 38.70 C
ATOM 25 P U B 945 140.696 -34.471 272.100 1.00 42.94 P
ATOM 26 OP1 U B 945 140.878 -35.227 270.894 1.00 42.98 O
ATOM 27 OP2 U B 945 141.895 -34.017 272.858 1.00 42.85 O
ATOM 28 O5' U B 945 139.741 -33.240 271.868 1.00 42.71 O
TER

Atoms:
C4: (134.867,-33.631,276.116)
N3: (134.380,-32.408,275.848)
OP1: (140.878,-35.227,270.894)
OP2: (141.895,-34.017,272.858)
C2: (134.766,-31.604,274.849)
C1': (136.184,-31.193,272.989)
C3': (138.232,-30.321,273.732)
O5': (139.741,-33.240,271.868)
O4': (137.203,-31.853,272.295)
C5': (139.487,-32.359,272.945)
P: (140.696,-34.471,272.100)
C4': (138.499,-31.272,272.600)
C2': (136.778,-29.921,273.550)
O2': (136.637,-28.900,272.590)
N1: (135.733,-32.073,274.047)
O4: (134.402,-34.259,277.081)
O2: (134.269,-30.518,274.692)
C6: (136.269,-33.295,274.210)
C5: (135.873,-34.067,275.196)
O3': (139.138,-29.253,273.758)
OP1: (137.936,-40.066,269.014)
OP2: (137.693,-41.259,271.278)
C3': (139.449,-36.690,272.588)
C1': (137.696,-37.255,274.078)
C5': (137.934,-37.527,270.736)
O6: (134.132,-41.074,276.771)
O4': (137.110,-36.912,272.853)
C8: (137.032,-39.633,274.072)
C2: (134.675,-37.703,277.229)
C6: (134.632,-39.974,276.576)
C5: (135.608,-39.648,275.618)
C4: (136.033,-38.376,275.566)
P: (137.485,-40.047,270.434)
C4': (138.113,-36.588,271.874)
C2': (139.154,-37.561,273.791)
O2': (139.939,-37.245,274.903)
N1: (134.197,-38.945,277.368)
N2: (134.099,-36.842,278.098)
N3: (135.633,-37.357,276.334)
N7: (136.241,-40.434,274.684)
N9: (136.953,-38.383,274.588)
O5': (138.120,-38.832,271.182)
O3': (139.835,-35.410,273.044)
Image (generated by PyMOL):
PyMOL image
show in jmol