ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCU:0347:0346

Extra

PDB:
ATOM 1 O3' G A 346 58.571 123.002 8.644 1.00 69.42 O
ATOM 2 P U A 347 59.459 121.949 7.811 1.00 69.95 P
ATOM 3 OP1 U A 347 60.793 121.840 8.453 1.00 69.22 O
ATOM 4 OP2 U A 347 59.359 122.288 6.364 1.00 70.43 O
ATOM 5 O5' U A 347 58.696 120.566 8.012 1.00 69.50 O
ATOM 6 C5' U A 347 58.796 119.828 9.245 1.00 67.83 C
ATOM 7 C4' U A 347 57.457 119.219 9.590 1.00 67.33 C
ATOM 8 O4' U A 347 56.518 120.274 9.910 1.00 66.69 O
ATOM 9 C3' U A 347 56.785 118.452 8.465 1.00 67.84 C
ATOM 10 O3' U A 347 57.283 117.119 8.398 1.00 70.42 O
ATOM 11 C2' U A 347 55.313 118.503 8.860 1.00 66.38 C
ATOM 12 O2' U A 347 54.971 117.534 9.828 1.00 65.47 O
ATOM 13 C1' U A 347 55.218 119.889 9.503 1.00 65.56 C
ATOM 14 N1 U A 347 54.651 120.955 8.664 1.00 64.37 N
ATOM 15 C2 U A 347 53.321 120.847 8.312 1.00 64.19 C
ATOM 16 O2 U A 347 52.631 119.890 8.616 1.00 66.09 O
ATOM 17 N3 U A 347 52.824 121.901 7.589 1.00 63.54 N
ATOM 18 C4 U A 347 53.505 123.024 7.185 1.00 63.41 C
ATOM 19 O4 U A 347 52.892 123.922 6.607 1.00 62.75 O
ATOM 20 C5 U A 347 54.889 123.050 7.559 1.00 63.91 C
ATOM 21 C6 U A 347 55.403 122.037 8.265 1.00 63.59 C
ATOM 22 P A A 348 57.444 116.393 6.972 1.00 72.40 P
ATOM 23 OP1 A A 348 58.147 115.103 7.229 1.00 71.34 O
ATOM 24 OP2 A A 348 58.023 117.361 6.004 1.00 71.73 O
ATOM 25 O5' A A 348 55.940 116.096 6.530 1.00 70.95 O
TER

ATOM 1 O3' A B 345 56.370 124.761 12.619 1.00 64.94 O
ATOM 2 P G B 346 57.762 125.094 13.347 1.00 65.37 P
ATOM 3 OP1 G B 346 58.137 123.921 14.172 1.00 66.23 O
ATOM 4 OP2 G B 346 57.617 126.425 13.982 1.00 66.44 O
ATOM 5 O5' G B 346 58.806 125.188 12.147 1.00 66.21 O
ATOM 6 C5' G B 346 58.477 125.918 10.951 1.00 68.44 C
ATOM 7 C4' G B 346 58.035 124.967 9.859 1.00 69.32 C
ATOM 8 O4' G B 346 57.259 125.699 8.872 1.00 68.77 O
ATOM 9 C3' G B 346 59.131 124.251 9.076 1.00 68.85 C
ATOM 10 O3' G B 346 58.571 123.002 8.644 1.00 69.42 O
ATOM 11 C2' G B 346 59.331 125.207 7.904 1.00 68.40 C
ATOM 12 O2' G B 346 59.961 124.647 6.774 1.00 68.67 O
ATOM 13 C1' G B 346 57.880 125.580 7.610 1.00 68.00 C
ATOM 14 N9 G B 346 57.663 126.825 6.890 1.00 66.83 N
ATOM 15 C8 G B 346 58.531 127.877 6.739 1.00 67.09 C
ATOM 16 N7 G B 346 58.026 128.859 6.044 1.00 67.03 N
ATOM 17 C5 G B 346 56.751 128.423 5.716 1.00 67.24 C
ATOM 18 C6 G B 346 55.728 129.056 4.971 1.00 68.67 C
ATOM 19 O6 G B 346 55.745 130.170 4.428 1.00 70.71 O
ATOM 20 N1 G B 346 54.591 128.257 4.884 1.00 68.55 N
ATOM 21 C2 G B 346 54.457 127.010 5.444 1.00 67.32 C
ATOM 22 N2 G B 346 53.280 126.399 5.254 1.00 67.67 N
ATOM 23 N3 G B 346 55.404 126.410 6.139 1.00 66.20 N
ATOM 24 C4 G B 346 56.515 127.169 6.233 1.00 66.80 C
ATOM 25 P U B 347 59.459 121.949 7.811 1.00 69.95 P
ATOM 26 OP1 U B 347 60.793 121.840 8.453 1.00 69.22 O
ATOM 27 OP2 U B 347 59.359 122.288 6.364 1.00 70.43 O
ATOM 28 O5' U B 347 58.696 120.566 8.012 1.00 69.50 O
TER

Atoms:
C4: (53.505,123.024,7.185)
N3: (52.824,121.901,7.589)
OP1: (60.793,121.840,8.453)
OP2: (59.359,122.288,6.364)
C2: (53.321,120.847,8.312)
C1': (55.218,119.889,9.503)
C3': (56.785,118.452,8.465)
O5': (58.696,120.566,8.012)
O4': (56.518,120.274,9.910)
C5': (58.796,119.828,9.245)
P: (59.459,121.949,7.811)
C4': (57.457,119.219,9.590)
C2': (55.313,118.503,8.860)
O2': (54.971,117.534,9.828)
N1: (54.651,120.955,8.664)
O4: (52.892,123.922,6.607)
O2: (52.631,119.890,8.616)
C6: (55.403,122.037,8.265)
C5: (54.889,123.050,7.559)
O3': (57.283,117.119,8.398)
OP1: (58.137,123.921,14.172)
OP2: (57.617,126.425,13.982)
C3': (59.131,124.251,9.076)
C1': (57.880,125.580,7.610)
C5': (58.477,125.918,10.951)
O6: (55.745,130.170,4.428)
O4': (57.259,125.699,8.872)
C8: (58.531,127.877,6.739)
C2: (54.457,127.010,5.444)
C6: (55.728,129.056,4.971)
C5: (56.751,128.423,5.716)
C4: (56.515,127.169,6.233)
P: (57.762,125.094,13.347)
C4': (58.035,124.967,9.859)
C2': (59.331,125.207,7.904)
O2': (59.961,124.647,6.774)
N1: (54.591,128.257,4.884)
N2: (53.280,126.399,5.254)
N3: (55.404,126.410,6.139)
N7: (58.026,128.859,6.044)
N9: (57.663,126.825,6.890)
O5': (58.806,125.188,12.147)
O3': (58.571,123.002,8.644)
Image (generated by PyMOL):
PyMOL image
show in jmol