ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01252:01251

Extra

PDB:
ATOM 1 O3' G A1251 32.342 100.779 84.549 1.00 36.33 O
ATOM 2 P U A1252 33.252 100.804 83.210 1.00 32.88 P
ATOM 3 OP1 U A1252 32.878 102.060 82.533 1.00 36.96 O
ATOM 4 OP2 U A1252 33.170 99.528 82.469 1.00 33.81 O
ATOM 5 O5' U A1252 34.741 100.942 83.753 1.00 33.25 O
ATOM 6 C5' U A1252 35.238 102.187 84.290 1.00 32.59 C
ATOM 7 C4' U A1252 36.742 102.112 84.432 1.00 34.77 C
ATOM 8 O4' U A1252 37.089 101.109 85.421 1.00 35.45 O
ATOM 9 C3' U A1252 37.442 101.649 83.167 1.00 33.51 C
ATOM 10 O3' U A1252 37.697 102.757 82.329 1.00 36.69 O
ATOM 11 C2' U A1252 38.725 101.021 83.687 1.00 32.44 C
ATOM 12 O2' U A1252 39.739 101.970 83.919 1.00 33.04 O
ATOM 13 C1' U A1252 38.257 100.414 85.014 1.00 33.36 C
ATOM 14 N1 U A1252 37.957 98.974 84.967 1.00 32.75 N
ATOM 15 C2 U A1252 39.009 98.087 84.726 1.00 33.72 C
ATOM 16 O2 U A1252 40.153 98.434 84.504 1.00 34.86 O
ATOM 17 N3 U A1252 38.668 96.768 84.774 1.00 35.83 N
ATOM 18 C4 U A1252 37.434 96.242 85.044 1.00 33.11 C
ATOM 19 O4 U A1252 37.321 95.025 85.119 1.00 35.40 O
ATOM 20 C5 U A1252 36.389 97.199 85.224 1.00 31.40 C
ATOM 21 C6 U A1252 36.676 98.503 85.169 1.00 30.83 C
ATOM 22 P A A1253 37.739 102.564 80.739 1.00 36.12 P
ATOM 23 OP1 A A1253 38.146 103.883 80.196 1.00 36.85 O
ATOM 24 OP2 A A1253 36.451 101.955 80.326 1.00 36.26 O
ATOM 25 O5' A A1253 38.927 101.533 80.498 1.00 32.32 O
TER

ATOM 1 O3' A B1250 26.585 99.174 86.789 1.00 43.26 O
ATOM 2 P G B1251 27.112 99.197 85.277 1.00 41.20 P
ATOM 3 OP1 G B1251 26.641 100.488 84.730 1.00 44.15 O
ATOM 4 OP2 G B1251 26.725 97.935 84.613 1.00 46.23 O
ATOM 5 O5' G B1251 28.707 99.193 85.364 1.00 43.40 O
ATOM 6 C5' G B1251 29.436 100.274 85.981 1.00 38.84 C
ATOM 7 C4' G B1251 30.875 99.864 86.232 1.00 37.75 C
ATOM 8 O4' G B1251 30.896 98.655 87.039 1.00 33.23 O
ATOM 9 C3' G B1251 31.746 99.558 85.015 1.00 35.18 C
ATOM 10 O3' G B1251 32.342 100.779 84.549 1.00 36.33 O
ATOM 11 C2' G B1251 32.791 98.606 85.596 1.00 35.39 C
ATOM 12 O2' G B1251 33.792 99.298 86.318 1.00 34.40 O
ATOM 13 C1' G B1251 31.959 97.819 86.616 1.00 34.40 C
ATOM 14 N9 G B1251 31.384 96.564 86.139 1.00 34.31 N
ATOM 15 C8 G B1251 30.054 96.308 85.885 1.00 35.22 C
ATOM 16 N7 G B1251 29.827 95.073 85.535 1.00 34.00 N
ATOM 17 C5 G B1251 31.079 94.478 85.545 1.00 34.06 C
ATOM 18 C6 G B1251 31.451 93.156 85.267 1.00 34.21 C
ATOM 19 O6 G B1251 30.734 92.218 84.966 1.00 36.26 O
ATOM 20 N1 G B1251 32.826 92.971 85.375 1.00 36.87 N
ATOM 21 C2 G B1251 33.729 93.948 85.719 1.00 34.90 C
ATOM 22 N2 G B1251 35.022 93.576 85.757 1.00 29.43 N
ATOM 23 N3 G B1251 33.386 95.194 86.002 1.00 34.04 N
ATOM 24 C4 G B1251 32.054 95.388 85.895 1.00 32.97 C
ATOM 25 P U B1252 33.252 100.804 83.210 1.00 32.88 P
ATOM 26 OP1 U B1252 32.878 102.060 82.533 1.00 36.96 O
ATOM 27 OP2 U B1252 33.170 99.528 82.469 1.00 33.81 O
ATOM 28 O5' U B1252 34.741 100.942 83.753 1.00 33.25 O
TER

Atoms:
C4: (37.434,96.242,85.044)
N3: (38.668,96.768,84.774)
OP1: (32.878,102.060,82.533)
OP2: (33.170,99.528,82.469)
C2: (39.009,98.087,84.726)
C1': (38.257,100.414,85.014)
C3': (37.442,101.649,83.167)
O5': (34.741,100.942,83.753)
O4': (37.089,101.109,85.421)
C5': (35.238,102.187,84.290)
P: (33.252,100.804,83.210)
C4': (36.742,102.112,84.432)
C2': (38.725,101.021,83.687)
O2': (39.739,101.970,83.919)
N1: (37.957,98.974,84.967)
O4: (37.321,95.025,85.119)
O2: (40.153,98.434,84.504)
C6: (36.676,98.503,85.169)
C5: (36.389,97.199,85.224)
O3': (37.697,102.757,82.329)
OP1: (26.641,100.488,84.730)
OP2: (26.725,97.935,84.613)
C3': (31.746,99.558,85.015)
C1': (31.959,97.819,86.616)
C5': (29.436,100.274,85.981)
O6: (30.734,92.218,84.966)
O4': (30.896,98.655,87.039)
C8: (30.054,96.308,85.885)
C2: (33.729,93.948,85.719)
C6: (31.451,93.156,85.267)
C5: (31.079,94.478,85.545)
C4: (32.054,95.388,85.895)
P: (27.112,99.197,85.277)
C4': (30.875,99.864,86.232)
C2': (32.791,98.606,85.596)
O2': (33.792,99.298,86.318)
N1: (32.826,92.971,85.375)
N2: (35.022,93.576,85.757)
N3: (33.386,95.194,86.002)
N7: (29.827,95.073,85.535)
N9: (31.384,96.564,86.139)
O5': (28.707,99.193,85.364)
O3': (32.342,100.779,84.549)
Image (generated by PyMOL):
PyMOL image
show in jmol