Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01252:01251
Extra
PDB:
ATOM 1 O3' G A1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 2 P U A1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 3 OP1 U A1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 4 OP2 U A1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 5 O5' U A1252 34.991 101.885 83.979 1.00 37.73 O
ATOM 6 C5' U A1252 35.484 103.155 84.466 1.00 37.40 C
ATOM 7 C4' U A1252 36.978 103.105 84.631 1.00 36.31 C
ATOM 8 O4' U A1252 37.299 102.114 85.626 1.00 36.73 O
ATOM 9 C3' U A1252 37.739 102.661 83.395 1.00 36.92 C
ATOM 10 O3' U A1252 38.027 103.767 82.561 1.00 37.96 O
ATOM 11 C2' U A1252 39.016 102.075 83.969 1.00 36.34 C
ATOM 12 O2' U A1252 39.964 103.075 84.260 1.00 35.27 O
ATOM 13 C1' U A1252 38.503 101.455 85.270 1.00 36.92 C
ATOM 14 N1 U A1252 38.245 100.009 85.225 1.00 36.22 N
ATOM 15 C2 U A1252 39.309 99.163 84.948 1.00 36.30 C
ATOM 16 O2 U A1252 40.430 99.568 84.686 1.00 35.57 O
ATOM 17 N3 U A1252 39.004 97.826 84.980 1.00 35.18 N
ATOM 18 C4 U A1252 37.773 97.264 85.241 1.00 35.71 C
ATOM 19 O4 U A1252 37.664 96.047 85.278 1.00 36.05 O
ATOM 20 C5 U A1252 36.724 98.200 85.488 1.00 36.19 C
ATOM 21 C6 U A1252 36.987 99.506 85.469 1.00 36.12 C
ATOM 22 P A A1253 37.933 103.600 80.979 1.00 39.19 P
ATOM 23 OP1 A A1253 38.236 104.925 80.392 1.00 40.12 O
ATOM 24 OP2 A A1253 36.624 102.942 80.697 1.00 39.94 O
ATOM 25 O5' A A1253 39.123 102.602 80.623 1.00 36.22 O
TER
ATOM 1 O3' A B1250 26.994 100.075 86.973 1.00 41.74 O
ATOM 2 P G B1251 27.574 100.011 85.485 1.00 43.11 P
ATOM 3 OP1 G B1251 27.136 101.254 84.801 1.00 40.94 O
ATOM 4 OP2 G B1251 27.229 98.693 84.905 1.00 43.81 O
ATOM 5 O5' G B1251 29.154 100.019 85.676 1.00 41.80 O
ATOM 6 C5' G B1251 29.823 101.112 86.330 1.00 39.41 C
ATOM 7 C4' G B1251 31.277 100.776 86.539 1.00 37.32 C
ATOM 8 O4' G B1251 31.364 99.553 87.308 1.00 35.66 O
ATOM 9 C3' G B1251 32.090 100.507 85.280 1.00 36.72 C
ATOM 10 O3' G B1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 11 C2' G B1251 33.194 99.595 85.803 1.00 38.16 C
ATOM 12 O2' G B1251 34.192 100.308 86.522 1.00 39.26 O
ATOM 13 C1' G B1251 32.423 98.753 86.817 1.00 37.76 C
ATOM 14 N9 G B1251 31.847 97.500 86.334 1.00 39.47 N
ATOM 15 C8 G B1251 30.512 97.249 86.141 1.00 41.16 C
ATOM 16 N7 G B1251 30.267 96.014 85.816 1.00 42.12 N
ATOM 17 C5 G B1251 31.513 95.414 85.768 1.00 40.24 C
ATOM 18 C6 G B1251 31.862 94.081 85.503 1.00 42.07 C
ATOM 19 O6 G B1251 31.116 93.122 85.266 1.00 44.19 O
ATOM 20 N1 G B1251 33.236 93.893 85.549 1.00 43.23 N
ATOM 21 C2 G B1251 34.153 94.865 85.825 1.00 42.86 C
ATOM 22 N2 G B1251 35.438 94.477 85.819 1.00 41.36 N
ATOM 23 N3 G B1251 33.836 96.121 86.089 1.00 42.78 N
ATOM 24 C4 G B1251 32.504 96.322 86.049 1.00 40.28 C
ATOM 25 P U B1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 26 OP1 U B1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 27 OP2 U B1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 28 O5' U B1252 34.991 101.885 83.979 1.00 37.73 O
TER
ATOM 2 P U A1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 3 OP1 U A1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 4 OP2 U A1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 5 O5' U A1252 34.991 101.885 83.979 1.00 37.73 O
ATOM 6 C5' U A1252 35.484 103.155 84.466 1.00 37.40 C
ATOM 7 C4' U A1252 36.978 103.105 84.631 1.00 36.31 C
ATOM 8 O4' U A1252 37.299 102.114 85.626 1.00 36.73 O
ATOM 9 C3' U A1252 37.739 102.661 83.395 1.00 36.92 C
ATOM 10 O3' U A1252 38.027 103.767 82.561 1.00 37.96 O
ATOM 11 C2' U A1252 39.016 102.075 83.969 1.00 36.34 C
ATOM 12 O2' U A1252 39.964 103.075 84.260 1.00 35.27 O
ATOM 13 C1' U A1252 38.503 101.455 85.270 1.00 36.92 C
ATOM 14 N1 U A1252 38.245 100.009 85.225 1.00 36.22 N
ATOM 15 C2 U A1252 39.309 99.163 84.948 1.00 36.30 C
ATOM 16 O2 U A1252 40.430 99.568 84.686 1.00 35.57 O
ATOM 17 N3 U A1252 39.004 97.826 84.980 1.00 35.18 N
ATOM 18 C4 U A1252 37.773 97.264 85.241 1.00 35.71 C
ATOM 19 O4 U A1252 37.664 96.047 85.278 1.00 36.05 O
ATOM 20 C5 U A1252 36.724 98.200 85.488 1.00 36.19 C
ATOM 21 C6 U A1252 36.987 99.506 85.469 1.00 36.12 C
ATOM 22 P A A1253 37.933 103.600 80.979 1.00 39.19 P
ATOM 23 OP1 A A1253 38.236 104.925 80.392 1.00 40.12 O
ATOM 24 OP2 A A1253 36.624 102.942 80.697 1.00 39.94 O
ATOM 25 O5' A A1253 39.123 102.602 80.623 1.00 36.22 O
TER
ATOM 1 O3' A B1250 26.994 100.075 86.973 1.00 41.74 O
ATOM 2 P G B1251 27.574 100.011 85.485 1.00 43.11 P
ATOM 3 OP1 G B1251 27.136 101.254 84.801 1.00 40.94 O
ATOM 4 OP2 G B1251 27.229 98.693 84.905 1.00 43.81 O
ATOM 5 O5' G B1251 29.154 100.019 85.676 1.00 41.80 O
ATOM 6 C5' G B1251 29.823 101.112 86.330 1.00 39.41 C
ATOM 7 C4' G B1251 31.277 100.776 86.539 1.00 37.32 C
ATOM 8 O4' G B1251 31.364 99.553 87.308 1.00 35.66 O
ATOM 9 C3' G B1251 32.090 100.507 85.280 1.00 36.72 C
ATOM 10 O3' G B1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 11 C2' G B1251 33.194 99.595 85.803 1.00 38.16 C
ATOM 12 O2' G B1251 34.192 100.308 86.522 1.00 39.26 O
ATOM 13 C1' G B1251 32.423 98.753 86.817 1.00 37.76 C
ATOM 14 N9 G B1251 31.847 97.500 86.334 1.00 39.47 N
ATOM 15 C8 G B1251 30.512 97.249 86.141 1.00 41.16 C
ATOM 16 N7 G B1251 30.267 96.014 85.816 1.00 42.12 N
ATOM 17 C5 G B1251 31.513 95.414 85.768 1.00 40.24 C
ATOM 18 C6 G B1251 31.862 94.081 85.503 1.00 42.07 C
ATOM 19 O6 G B1251 31.116 93.122 85.266 1.00 44.19 O
ATOM 20 N1 G B1251 33.236 93.893 85.549 1.00 43.23 N
ATOM 21 C2 G B1251 34.153 94.865 85.825 1.00 42.86 C
ATOM 22 N2 G B1251 35.438 94.477 85.819 1.00 41.36 N
ATOM 23 N3 G B1251 33.836 96.121 86.089 1.00 42.78 N
ATOM 24 C4 G B1251 32.504 96.322 86.049 1.00 40.28 C
ATOM 25 P U B1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 26 OP1 U B1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 27 OP2 U B1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 28 O5' U B1252 34.991 101.885 83.979 1.00 37.73 O
TER
Atoms:
C4: (37.773,97.264,85.241)
N3: (39.004,97.826,84.980)
OP1: (33.172,103.007,82.690)
OP2: (33.394,100.452,82.729)
C2: (39.309,99.163,84.948)
C1': (38.503,101.455,85.270)
C3': (37.739,102.661,83.395)
O5': (34.991,101.885,83.979)
O4': (37.299,102.114,85.626)
C5': (35.484,103.155,84.466)
P: (33.502,101.752,83.425)
C4': (36.978,103.105,84.631)
C2': (39.016,102.075,83.969)
O2': (39.964,103.075,84.260)
N1: (38.245,100.009,85.225)
O4: (37.664,96.047,85.278)
O2: (40.430,99.568,84.686)
C6: (36.987,99.506,85.469)
C5: (36.724,98.200,85.488)
O3': (38.027,103.767,82.561)
N3: (39.004,97.826,84.980)
OP1: (33.172,103.007,82.690)
OP2: (33.394,100.452,82.729)
C2: (39.309,99.163,84.948)
C1': (38.503,101.455,85.270)
C3': (37.739,102.661,83.395)
O5': (34.991,101.885,83.979)
O4': (37.299,102.114,85.626)
C5': (35.484,103.155,84.466)
P: (33.502,101.752,83.425)
C4': (36.978,103.105,84.631)
C2': (39.016,102.075,83.969)
O2': (39.964,103.075,84.260)
N1: (38.245,100.009,85.225)
O4: (37.664,96.047,85.278)
O2: (40.430,99.568,84.686)
C6: (36.987,99.506,85.469)
C5: (36.724,98.200,85.488)
O3': (38.027,103.767,82.561)
OP1: (27.136,101.254,84.801)
OP2: (27.229,98.693,84.905)
C3': (32.090,100.507,85.280)
C1': (32.423,98.753,86.817)
C5': (29.823,101.112,86.330)
O6: (31.116,93.122,85.266)
O4': (31.364,99.553,87.308)
C8: (30.512,97.249,86.141)
C2: (34.153,94.865,85.825)
C6: (31.862,94.081,85.503)
C5: (31.513,95.414,85.768)
C4: (32.504,96.322,86.049)
P: (27.574,100.011,85.485)
C4': (31.277,100.776,86.539)
C2': (33.194,99.595,85.803)
O2': (34.192,100.308,86.522)
N1: (33.236,93.893,85.549)
N2: (35.438,94.477,85.819)
N3: (33.836,96.121,86.089)
N7: (30.267,96.014,85.816)
N9: (31.847,97.500,86.334)
O5': (29.154,100.019,85.676)
O3': (32.585,101.740,84.752)
OP2: (27.229,98.693,84.905)
C3': (32.090,100.507,85.280)
C1': (32.423,98.753,86.817)
C5': (29.823,101.112,86.330)
O6: (31.116,93.122,85.266)
O4': (31.364,99.553,87.308)
C8: (30.512,97.249,86.141)
C2: (34.153,94.865,85.825)
C6: (31.862,94.081,85.503)
C5: (31.513,95.414,85.768)
C4: (32.504,96.322,86.049)
P: (27.574,100.011,85.485)
C4': (31.277,100.776,86.539)
C2': (33.194,99.595,85.803)
O2': (34.192,100.308,86.522)
N1: (33.236,93.893,85.549)
N2: (35.438,94.477,85.819)
N3: (33.836,96.121,86.089)
N7: (30.267,96.014,85.816)
N9: (31.847,97.500,86.334)
O5': (29.154,100.019,85.676)
O3': (32.585,101.740,84.752)
Image (generated by PyMOL):