ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A748:A747

Extra

PDB:
ATOM 1 O3' G A 747 56.700 -39.156 -3.430 1.00 25.58 O
ATOM 2 P U A 748 58.206 -38.602 -3.429 1.00 31.12 P
ATOM 3 OP1 U A 748 58.212 -37.341 -4.216 1.00 33.41 O
ATOM 4 OP2 U A 748 59.077 -39.701 -3.891 1.00 37.24 O
ATOM 5 O5' U A 748 58.468 -38.304 -1.870 1.00 26.69 O
ATOM 6 C5' U A 748 58.674 -36.974 -1.386 1.00 30.06 C
ATOM 7 C4' U A 748 58.625 -36.895 0.133 1.00 27.07 C
ATOM 8 O4' U A 748 57.254 -36.792 0.578 1.00 24.08 O
ATOM 9 C3' U A 748 59.186 -38.095 0.884 1.00 28.60 C
ATOM 10 O3' U A 748 60.589 -38.025 1.058 1.00 30.30 O
ATOM 11 C2' U A 748 58.419 -38.091 2.205 1.00 31.15 C
ATOM 12 O2' U A 748 59.057 -37.265 3.164 1.00 31.86 O
ATOM 13 C1' U A 748 57.093 -37.439 1.818 1.00 30.31 C
ATOM 14 N1 U A 748 55.993 -38.421 1.720 1.00 30.92 N
ATOM 15 C2 U A 748 55.487 -38.846 2.933 1.00 26.71 C
ATOM 16 O2 U A 748 55.912 -38.456 3.993 1.00 24.68 O
ATOM 17 N3 U A 748 54.471 -39.738 2.875 1.00 23.92 N
ATOM 18 C4 U A 748 53.939 -40.245 1.730 1.00 28.10 C
ATOM 19 O4 U A 748 53.020 -41.026 1.847 1.00 26.88 O
ATOM 20 C5 U A 748 54.511 -39.779 0.503 1.00 30.49 C
ATOM 21 C6 U A 748 55.506 -38.883 0.526 1.00 27.80 C
ATOM 22 P G A 749 61.469 -39.366 1.063 1.00 29.36 P
ATOM 23 OP1 G A 749 62.889 -38.950 1.001 1.00 44.54 O
ATOM 24 OP2 G A 749 60.933 -40.247 -0.010 1.00 33.79 O
ATOM 25 O5' G A 749 61.156 -39.995 2.471 1.00 24.87 O
TER

ATOM 1 O3' G B 746 52.566 -37.425 -7.892 1.00 32.86 O
ATOM 2 P G B 747 53.548 -38.606 -8.329 1.00 39.03 P
ATOM 3 OP1 G B 747 54.403 -38.071 -9.430 1.00 32.94 O
ATOM 4 OP2 G B 747 52.722 -39.807 -8.584 1.00 39.23 O
ATOM 5 O5' G B 747 54.395 -38.805 -7.008 1.00 31.47 O
ATOM 6 C5' G B 747 54.734 -37.678 -6.208 1.00 27.85 C
ATOM 7 C4' G B 747 55.041 -38.075 -4.798 1.00 28.98 C
ATOM 8 O4' G B 747 53.812 -38.468 -4.160 1.00 27.61 O
ATOM 9 C3' G B 747 55.979 -39.264 -4.653 1.00 28.23 C
ATOM 10 O3' G B 747 56.700 -39.156 -3.430 1.00 25.58 O
ATOM 11 C2' G B 747 55.005 -40.414 -4.566 1.00 23.10 C
ATOM 12 O2' G B 747 55.509 -41.561 -3.956 1.00 34.67 O
ATOM 13 C1' G B 747 53.905 -39.802 -3.741 1.00 26.98 C
ATOM 14 N9 G B 747 52.625 -40.420 -3.976 1.00 37.20 N
ATOM 15 C8 G B 747 52.116 -40.579 -5.226 1.00 37.93 C
ATOM 16 N7 G B 747 50.959 -41.160 -5.183 1.00 44.73 N
ATOM 17 C5 G B 747 50.706 -41.390 -3.840 1.00 33.79 C
ATOM 18 C6 G B 747 49.602 -41.987 -3.220 1.00 30.47 C
ATOM 19 O6 G B 747 48.603 -42.446 -3.757 1.00 43.32 O
ATOM 20 N1 G B 747 49.740 -42.030 -1.854 1.00 31.53 N
ATOM 21 C2 G B 747 50.820 -41.548 -1.174 1.00 33.65 C
ATOM 22 N2 G B 747 50.773 -41.677 0.151 1.00 35.40 N
ATOM 23 N3 G B 747 51.868 -40.979 -1.731 1.00 39.28 N
ATOM 24 C4 G B 747 51.735 -40.937 -3.069 1.00 37.95 C
ATOM 25 P U B 748 58.206 -38.602 -3.429 1.00 31.12 P
ATOM 26 OP1 U B 748 58.212 -37.341 -4.216 1.00 33.41 O
ATOM 27 OP2 U B 748 59.077 -39.701 -3.891 1.00 37.24 O
ATOM 28 O5' U B 748 58.468 -38.304 -1.870 1.00 26.69 O
TER

Atoms:
C4: (53.939,-40.245,1.730)
N3: (54.471,-39.738,2.875)
OP1: (58.212,-37.341,-4.216)
OP2: (59.077,-39.701,-3.891)
C2: (55.487,-38.846,2.933)
C1': (57.093,-37.439,1.818)
C3': (59.186,-38.095,0.884)
O5': (58.468,-38.304,-1.870)
O4': (57.254,-36.792,0.578)
C5': (58.674,-36.974,-1.386)
P: (58.206,-38.602,-3.429)
C4': (58.625,-36.895,0.133)
C2': (58.419,-38.091,2.205)
O2': (59.057,-37.265,3.164)
N1: (55.993,-38.421,1.720)
O4: (53.020,-41.026,1.847)
O2: (55.912,-38.456,3.993)
C6: (55.506,-38.883,0.526)
C5: (54.511,-39.779,0.503)
O3': (60.589,-38.025,1.058)
OP1: (54.403,-38.071,-9.430)
OP2: (52.722,-39.807,-8.584)
C3': (55.979,-39.264,-4.653)
C1': (53.905,-39.802,-3.741)
C5': (54.734,-37.678,-6.208)
O6: (48.603,-42.446,-3.757)
O4': (53.812,-38.468,-4.160)
C8: (52.116,-40.579,-5.226)
C2: (50.820,-41.548,-1.174)
C6: (49.602,-41.987,-3.220)
C5: (50.706,-41.390,-3.840)
C4: (51.735,-40.937,-3.069)
P: (53.548,-38.606,-8.329)
C4': (55.041,-38.075,-4.798)
C2': (55.005,-40.414,-4.566)
O2': (55.509,-41.561,-3.956)
N1: (49.740,-42.030,-1.854)
N2: (50.773,-41.677,0.151)
N3: (51.868,-40.979,-1.731)
N7: (50.959,-41.160,-5.183)
N9: (52.625,-40.420,-3.976)
O5': (54.395,-38.805,-7.008)
O3': (56.700,-39.156,-3.430)
Image (generated by PyMOL):
PyMOL image
show in jmol