Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:G25:G24
Extra
PDB:
ATOM 1 O3' G A 24 -8.267 -18.186 83.962 1.00 39.36 O
ATOM 2 P U A 25 -7.527 -18.646 82.634 1.00 43.82 P
ATOM 3 OP1 U A 25 -8.687 -19.125 81.842 1.00 42.06 O
ATOM 4 OP2 U A 25 -6.419 -19.563 82.969 1.00 36.83 O
ATOM 5 O5' U A 25 -6.935 -17.265 82.105 1.00 47.23 O
ATOM 6 C5' U A 25 -7.820 -16.183 81.854 1.00 54.73 C
ATOM 7 C4' U A 25 -7.336 -14.849 82.378 1.00 62.27 C
ATOM 8 O4' U A 25 -7.767 -14.647 83.745 1.00 61.14 O
ATOM 9 C3' U A 25 -5.839 -14.607 82.400 1.00 58.14 C
ATOM 10 O3' U A 25 -5.348 -14.187 81.141 1.00 57.51 O
ATOM 11 C2' U A 25 -5.694 -13.544 83.479 1.00 61.59 C
ATOM 12 O2' U A 25 -5.975 -12.266 82.953 1.00 57.17 O
ATOM 13 C1' U A 25 -6.812 -13.895 84.456 1.00 58.30 C
ATOM 14 N1 U A 25 -6.314 -14.660 85.621 1.00 52.03 N
ATOM 15 C2 U A 25 -5.497 -14.030 86.518 1.00 53.61 C
ATOM 16 O2 U A 25 -5.174 -12.866 86.411 1.00 56.97 O
ATOM 17 N3 U A 25 -5.054 -14.805 87.552 1.00 44.25 N
ATOM 18 C4 U A 25 -5.341 -16.122 87.811 1.00 37.46 C
ATOM 19 O4 U A 25 -4.875 -16.681 88.813 1.00 35.76 O
ATOM 20 C5 U A 25 -6.198 -16.705 86.839 1.00 38.18 C
ATOM 21 C6 U A 25 -6.635 -15.974 85.812 1.00 45.53 C
ATOM 22 P G A 26 -3.875 -14.550 80.636 1.00 55.87 P
ATOM 23 OP1 G A 26 -3.844 -14.099 79.227 1.00 54.58 O
ATOM 24 OP2 G A 26 -3.601 -15.956 81.004 1.00 52.11 O
ATOM 25 O5' G A 26 -2.922 -13.641 81.513 1.00 55.05 O
TER
ATOM 1 O3' A B 23 -14.501 -17.349 85.977 1.00 54.03 O
ATOM 2 P G B 24 -13.750 -17.963 84.689 1.00 53.98 P
ATOM 3 OP1 G B 24 -13.528 -16.816 83.765 1.00 56.73 O
ATOM 4 OP2 G B 24 -14.469 -19.174 84.208 1.00 51.26 O
ATOM 5 O5' G B 24 -12.373 -18.445 85.325 1.00 46.04 O
ATOM 6 C5' G B 24 -11.433 -17.445 85.676 1.00 46.92 C
ATOM 7 C4' G B 24 -9.995 -17.896 85.560 1.00 41.47 C
ATOM 8 O4' G B 24 -9.601 -18.646 86.733 1.00 36.15 O
ATOM 9 C3' G B 24 -9.532 -18.713 84.349 1.00 38.32 C
ATOM 10 O3' G B 24 -8.267 -18.186 83.962 1.00 39.36 O
ATOM 11 C2' G B 24 -9.253 -20.091 84.940 1.00 34.98 C
ATOM 12 O2' G B 24 -8.258 -20.798 84.224 1.00 32.95 O
ATOM 13 C1' G B 24 -8.754 -19.698 86.327 1.00 32.75 C
ATOM 14 N9 G B 24 -8.798 -20.666 87.420 1.00 32.46 N
ATOM 15 C8 G B 24 -9.733 -21.617 87.713 1.00 33.87 C
ATOM 16 N7 G B 24 -9.466 -22.252 88.837 1.00 33.44 N
ATOM 17 C5 G B 24 -8.308 -21.672 89.320 1.00 31.61 C
ATOM 18 C6 G B 24 -7.554 -21.945 90.481 1.00 30.65 C
ATOM 19 O6 G B 24 -7.754 -22.794 91.355 1.00 31.21 O
ATOM 20 N1 G B 24 -6.459 -21.109 90.580 1.00 29.18 N
ATOM 21 C2 G B 24 -6.130 -20.151 89.665 1.00 28.78 C
ATOM 22 N2 G B 24 -5.028 -19.437 89.921 1.00 27.68 N
ATOM 23 N3 G B 24 -6.815 -19.893 88.573 1.00 29.69 N
ATOM 24 C4 G B 24 -7.891 -20.688 88.460 1.00 31.03 C
ATOM 25 P U B 25 -7.527 -18.646 82.634 1.00 43.82 P
ATOM 26 OP1 U B 25 -8.687 -19.125 81.842 1.00 42.06 O
ATOM 27 OP2 U B 25 -6.419 -19.563 82.969 1.00 36.83 O
ATOM 28 O5' U B 25 -6.935 -17.265 82.105 1.00 47.23 O
TER
ATOM 2 P U A 25 -7.527 -18.646 82.634 1.00 43.82 P
ATOM 3 OP1 U A 25 -8.687 -19.125 81.842 1.00 42.06 O
ATOM 4 OP2 U A 25 -6.419 -19.563 82.969 1.00 36.83 O
ATOM 5 O5' U A 25 -6.935 -17.265 82.105 1.00 47.23 O
ATOM 6 C5' U A 25 -7.820 -16.183 81.854 1.00 54.73 C
ATOM 7 C4' U A 25 -7.336 -14.849 82.378 1.00 62.27 C
ATOM 8 O4' U A 25 -7.767 -14.647 83.745 1.00 61.14 O
ATOM 9 C3' U A 25 -5.839 -14.607 82.400 1.00 58.14 C
ATOM 10 O3' U A 25 -5.348 -14.187 81.141 1.00 57.51 O
ATOM 11 C2' U A 25 -5.694 -13.544 83.479 1.00 61.59 C
ATOM 12 O2' U A 25 -5.975 -12.266 82.953 1.00 57.17 O
ATOM 13 C1' U A 25 -6.812 -13.895 84.456 1.00 58.30 C
ATOM 14 N1 U A 25 -6.314 -14.660 85.621 1.00 52.03 N
ATOM 15 C2 U A 25 -5.497 -14.030 86.518 1.00 53.61 C
ATOM 16 O2 U A 25 -5.174 -12.866 86.411 1.00 56.97 O
ATOM 17 N3 U A 25 -5.054 -14.805 87.552 1.00 44.25 N
ATOM 18 C4 U A 25 -5.341 -16.122 87.811 1.00 37.46 C
ATOM 19 O4 U A 25 -4.875 -16.681 88.813 1.00 35.76 O
ATOM 20 C5 U A 25 -6.198 -16.705 86.839 1.00 38.18 C
ATOM 21 C6 U A 25 -6.635 -15.974 85.812 1.00 45.53 C
ATOM 22 P G A 26 -3.875 -14.550 80.636 1.00 55.87 P
ATOM 23 OP1 G A 26 -3.844 -14.099 79.227 1.00 54.58 O
ATOM 24 OP2 G A 26 -3.601 -15.956 81.004 1.00 52.11 O
ATOM 25 O5' G A 26 -2.922 -13.641 81.513 1.00 55.05 O
TER
ATOM 1 O3' A B 23 -14.501 -17.349 85.977 1.00 54.03 O
ATOM 2 P G B 24 -13.750 -17.963 84.689 1.00 53.98 P
ATOM 3 OP1 G B 24 -13.528 -16.816 83.765 1.00 56.73 O
ATOM 4 OP2 G B 24 -14.469 -19.174 84.208 1.00 51.26 O
ATOM 5 O5' G B 24 -12.373 -18.445 85.325 1.00 46.04 O
ATOM 6 C5' G B 24 -11.433 -17.445 85.676 1.00 46.92 C
ATOM 7 C4' G B 24 -9.995 -17.896 85.560 1.00 41.47 C
ATOM 8 O4' G B 24 -9.601 -18.646 86.733 1.00 36.15 O
ATOM 9 C3' G B 24 -9.532 -18.713 84.349 1.00 38.32 C
ATOM 10 O3' G B 24 -8.267 -18.186 83.962 1.00 39.36 O
ATOM 11 C2' G B 24 -9.253 -20.091 84.940 1.00 34.98 C
ATOM 12 O2' G B 24 -8.258 -20.798 84.224 1.00 32.95 O
ATOM 13 C1' G B 24 -8.754 -19.698 86.327 1.00 32.75 C
ATOM 14 N9 G B 24 -8.798 -20.666 87.420 1.00 32.46 N
ATOM 15 C8 G B 24 -9.733 -21.617 87.713 1.00 33.87 C
ATOM 16 N7 G B 24 -9.466 -22.252 88.837 1.00 33.44 N
ATOM 17 C5 G B 24 -8.308 -21.672 89.320 1.00 31.61 C
ATOM 18 C6 G B 24 -7.554 -21.945 90.481 1.00 30.65 C
ATOM 19 O6 G B 24 -7.754 -22.794 91.355 1.00 31.21 O
ATOM 20 N1 G B 24 -6.459 -21.109 90.580 1.00 29.18 N
ATOM 21 C2 G B 24 -6.130 -20.151 89.665 1.00 28.78 C
ATOM 22 N2 G B 24 -5.028 -19.437 89.921 1.00 27.68 N
ATOM 23 N3 G B 24 -6.815 -19.893 88.573 1.00 29.69 N
ATOM 24 C4 G B 24 -7.891 -20.688 88.460 1.00 31.03 C
ATOM 25 P U B 25 -7.527 -18.646 82.634 1.00 43.82 P
ATOM 26 OP1 U B 25 -8.687 -19.125 81.842 1.00 42.06 O
ATOM 27 OP2 U B 25 -6.419 -19.563 82.969 1.00 36.83 O
ATOM 28 O5' U B 25 -6.935 -17.265 82.105 1.00 47.23 O
TER
Atoms:
C4: (-5.341,-16.122,87.811)
N3: (-5.054,-14.805,87.552)
OP1: (-8.687,-19.125,81.842)
OP2: (-6.419,-19.563,82.969)
C2: (-5.497,-14.030,86.518)
C1': (-6.812,-13.895,84.456)
C3': (-5.839,-14.607,82.400)
O5': (-6.935,-17.265,82.105)
O4': (-7.767,-14.647,83.745)
C5': (-7.820,-16.183,81.854)
P: (-7.527,-18.646,82.634)
C4': (-7.336,-14.849,82.378)
C2': (-5.694,-13.544,83.479)
O2': (-5.975,-12.266,82.953)
N1: (-6.314,-14.660,85.621)
O4: (-4.875,-16.681,88.813)
O2: (-5.174,-12.866,86.411)
C6: (-6.635,-15.974,85.812)
C5: (-6.198,-16.705,86.839)
O3': (-5.348,-14.187,81.141)
N3: (-5.054,-14.805,87.552)
OP1: (-8.687,-19.125,81.842)
OP2: (-6.419,-19.563,82.969)
C2: (-5.497,-14.030,86.518)
C1': (-6.812,-13.895,84.456)
C3': (-5.839,-14.607,82.400)
O5': (-6.935,-17.265,82.105)
O4': (-7.767,-14.647,83.745)
C5': (-7.820,-16.183,81.854)
P: (-7.527,-18.646,82.634)
C4': (-7.336,-14.849,82.378)
C2': (-5.694,-13.544,83.479)
O2': (-5.975,-12.266,82.953)
N1: (-6.314,-14.660,85.621)
O4: (-4.875,-16.681,88.813)
O2: (-5.174,-12.866,86.411)
C6: (-6.635,-15.974,85.812)
C5: (-6.198,-16.705,86.839)
O3': (-5.348,-14.187,81.141)
OP1: (-13.528,-16.816,83.765)
OP2: (-14.469,-19.174,84.208)
C3': (-9.532,-18.713,84.349)
C1': (-8.754,-19.698,86.327)
C5': (-11.433,-17.445,85.676)
O6: (-7.754,-22.794,91.355)
O4': (-9.601,-18.646,86.733)
C8: (-9.733,-21.617,87.713)
C2: (-6.130,-20.151,89.665)
C6: (-7.554,-21.945,90.481)
C5: (-8.308,-21.672,89.320)
C4: (-7.891,-20.688,88.460)
P: (-13.750,-17.963,84.689)
C4': (-9.995,-17.896,85.560)
C2': (-9.253,-20.091,84.940)
O2': (-8.258,-20.798,84.224)
N1: (-6.459,-21.109,90.580)
N2: (-5.028,-19.437,89.921)
N3: (-6.815,-19.893,88.573)
N7: (-9.466,-22.252,88.837)
N9: (-8.798,-20.666,87.420)
O5': (-12.373,-18.445,85.325)
O3': (-8.267,-18.186,83.962)
OP2: (-14.469,-19.174,84.208)
C3': (-9.532,-18.713,84.349)
C1': (-8.754,-19.698,86.327)
C5': (-11.433,-17.445,85.676)
O6: (-7.754,-22.794,91.355)
O4': (-9.601,-18.646,86.733)
C8: (-9.733,-21.617,87.713)
C2: (-6.130,-20.151,89.665)
C6: (-7.554,-21.945,90.481)
C5: (-8.308,-21.672,89.320)
C4: (-7.891,-20.688,88.460)
P: (-13.750,-17.963,84.689)
C4': (-9.995,-17.896,85.560)
C2': (-9.253,-20.091,84.940)
O2': (-8.258,-20.798,84.224)
N1: (-6.459,-21.109,90.580)
N2: (-5.028,-19.437,89.921)
N3: (-6.815,-19.893,88.573)
N7: (-9.466,-22.252,88.837)
N9: (-8.798,-20.666,87.420)
O5': (-12.373,-18.445,85.325)
O3': (-8.267,-18.186,83.962)
Image (generated by PyMOL):