Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A9:A8
Extra
PDB:
ATOM 1 O3' G A 8 13.216 0.237 3.764 1.00 10.94 O
ATOM 2 P U A 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 3 OP1 U A 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 4 OP2 U A 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 5 O5' U A 9 12.949 -1.183 1.758 1.00 11.04 O
ATOM 6 C5' U A 9 11.780 -1.942 2.016 1.00 10.70 C
ATOM 7 C4' U A 9 10.738 -1.606 0.968 1.00 10.47 C
ATOM 8 O4' U A 9 10.152 -0.324 1.291 1.00 10.41 O
ATOM 9 C3' U A 9 11.295 -1.440 -0.437 1.00 10.22 C
ATOM 10 O3' U A 9 11.284 -2.687 -1.107 1.00 10.88 O
ATOM 11 C2' U A 9 10.303 -0.476 -1.069 1.00 9.93 C
ATOM 12 O2' U A 9 9.140 -1.153 -1.505 1.00 10.64 O
ATOM 13 C1' U A 9 9.974 0.433 0.112 1.00 9.92 C
ATOM 14 N1 U A 9 10.796 1.681 0.211 1.00 9.52 N
ATOM 15 C2 U A 9 10.679 2.609 -0.798 1.00 9.00 C
ATOM 16 O2 U A 9 9.960 2.436 -1.767 1.00 9.31 O
ATOM 17 N3 U A 9 11.438 3.740 -0.632 1.00 9.11 N
ATOM 18 C4 U A 9 12.280 4.029 0.425 1.00 9.37 C
ATOM 19 O4 U A 9 12.899 5.088 0.430 1.00 9.85 O
ATOM 20 C5 U A 9 12.342 3.017 1.449 1.00 9.46 C
ATOM 21 C6 U A 9 11.609 1.905 1.306 1.00 9.55 C
ATOM 22 P A A 10 12.486 -3.087 -2.079 1.00 11.06 P
ATOM 23 OP1 A A 10 12.164 -4.430 -2.615 1.00 11.96 O
ATOM 24 OP2 A A 10 13.765 -2.858 -1.376 1.00 11.62 O
ATOM 25 O5' A A 10 12.413 -2.010 -3.254 1.00 10.29 O
TER
ATOM 1 O3' A B 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 2 P G B 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 3 OP1 G B 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 4 OP2 G B 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 5 O5' G B 8 10.652 1.646 7.501 1.00 13.60 O
ATOM 6 C5' G B 8 11.711 0.843 7.009 1.00 13.53 C
ATOM 7 C4' G B 8 12.196 1.226 5.626 1.00 12.36 C
ATOM 8 O4' G B 8 12.816 2.545 5.583 1.00 12.21 O
ATOM 9 C3' G B 8 13.281 0.274 5.165 1.00 11.68 C
ATOM 10 O3' G B 8 13.216 0.237 3.764 1.00 10.94 O
ATOM 11 C2' G B 8 14.528 0.997 5.656 1.00 11.80 C
ATOM 12 O2' G B 8 15.707 0.516 5.043 1.00 12.77 O
ATOM 13 C1' G B 8 14.160 2.386 5.157 1.00 11.19 C
ATOM 14 N9 G B 8 14.980 3.501 5.635 1.00 11.30 N
ATOM 15 C8 G B 8 15.723 3.616 6.786 1.00 12.20 C
ATOM 16 N7 G B 8 16.334 4.768 6.888 1.00 12.90 N
ATOM 17 C5 G B 8 15.975 5.458 5.734 1.00 12.12 C
ATOM 18 C6 G B 8 16.318 6.754 5.275 1.00 12.59 C
ATOM 19 O6 G B 8 17.043 7.598 5.816 1.00 14.49 O
ATOM 20 N1 G B 8 15.724 7.047 4.050 1.00 11.08 N
ATOM 21 C2 G B 8 14.902 6.196 3.353 1.00 10.18 C
ATOM 22 N2 G B 8 14.421 6.648 2.187 1.00 10.33 N
ATOM 23 N3 G B 8 14.576 4.983 3.770 1.00 10.08 N
ATOM 24 C4 G B 8 15.145 4.685 4.959 1.00 10.92 C
ATOM 25 P U B 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 26 OP1 U B 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 27 OP2 U B 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 28 O5' U B 9 12.949 -1.183 1.758 1.00 11.04 O
TER
ATOM 2 P U A 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 3 OP1 U A 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 4 OP2 U A 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 5 O5' U A 9 12.949 -1.183 1.758 1.00 11.04 O
ATOM 6 C5' U A 9 11.780 -1.942 2.016 1.00 10.70 C
ATOM 7 C4' U A 9 10.738 -1.606 0.968 1.00 10.47 C
ATOM 8 O4' U A 9 10.152 -0.324 1.291 1.00 10.41 O
ATOM 9 C3' U A 9 11.295 -1.440 -0.437 1.00 10.22 C
ATOM 10 O3' U A 9 11.284 -2.687 -1.107 1.00 10.88 O
ATOM 11 C2' U A 9 10.303 -0.476 -1.069 1.00 9.93 C
ATOM 12 O2' U A 9 9.140 -1.153 -1.505 1.00 10.64 O
ATOM 13 C1' U A 9 9.974 0.433 0.112 1.00 9.92 C
ATOM 14 N1 U A 9 10.796 1.681 0.211 1.00 9.52 N
ATOM 15 C2 U A 9 10.679 2.609 -0.798 1.00 9.00 C
ATOM 16 O2 U A 9 9.960 2.436 -1.767 1.00 9.31 O
ATOM 17 N3 U A 9 11.438 3.740 -0.632 1.00 9.11 N
ATOM 18 C4 U A 9 12.280 4.029 0.425 1.00 9.37 C
ATOM 19 O4 U A 9 12.899 5.088 0.430 1.00 9.85 O
ATOM 20 C5 U A 9 12.342 3.017 1.449 1.00 9.46 C
ATOM 21 C6 U A 9 11.609 1.905 1.306 1.00 9.55 C
ATOM 22 P A A 10 12.486 -3.087 -2.079 1.00 11.06 P
ATOM 23 OP1 A A 10 12.164 -4.430 -2.615 1.00 11.96 O
ATOM 24 OP2 A A 10 13.765 -2.858 -1.376 1.00 11.62 O
ATOM 25 O5' A A 10 12.413 -2.010 -3.254 1.00 10.29 O
TER
ATOM 1 O3' A B 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 2 P G B 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 3 OP1 G B 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 4 OP2 G B 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 5 O5' G B 8 10.652 1.646 7.501 1.00 13.60 O
ATOM 6 C5' G B 8 11.711 0.843 7.009 1.00 13.53 C
ATOM 7 C4' G B 8 12.196 1.226 5.626 1.00 12.36 C
ATOM 8 O4' G B 8 12.816 2.545 5.583 1.00 12.21 O
ATOM 9 C3' G B 8 13.281 0.274 5.165 1.00 11.68 C
ATOM 10 O3' G B 8 13.216 0.237 3.764 1.00 10.94 O
ATOM 11 C2' G B 8 14.528 0.997 5.656 1.00 11.80 C
ATOM 12 O2' G B 8 15.707 0.516 5.043 1.00 12.77 O
ATOM 13 C1' G B 8 14.160 2.386 5.157 1.00 11.19 C
ATOM 14 N9 G B 8 14.980 3.501 5.635 1.00 11.30 N
ATOM 15 C8 G B 8 15.723 3.616 6.786 1.00 12.20 C
ATOM 16 N7 G B 8 16.334 4.768 6.888 1.00 12.90 N
ATOM 17 C5 G B 8 15.975 5.458 5.734 1.00 12.12 C
ATOM 18 C6 G B 8 16.318 6.754 5.275 1.00 12.59 C
ATOM 19 O6 G B 8 17.043 7.598 5.816 1.00 14.49 O
ATOM 20 N1 G B 8 15.724 7.047 4.050 1.00 11.08 N
ATOM 21 C2 G B 8 14.902 6.196 3.353 1.00 10.18 C
ATOM 22 N2 G B 8 14.421 6.648 2.187 1.00 10.33 N
ATOM 23 N3 G B 8 14.576 4.983 3.770 1.00 10.08 N
ATOM 24 C4 G B 8 15.145 4.685 4.959 1.00 10.92 C
ATOM 25 P U B 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 26 OP1 U B 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 27 OP2 U B 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 28 O5' U B 9 12.949 -1.183 1.758 1.00 11.04 O
TER
Atoms:
C4: (12.280,4.029,0.425)
N3: (11.438,3.740,-0.632)
OP1: (14.210,-2.061,3.766)
OP2: (15.148,-0.209,2.262)
C2: (10.679,2.609,-0.798)
C1': (9.974,0.433,0.112)
C3': (11.295,-1.440,-0.437)
O5': (12.949,-1.183,1.758)
O4': (10.152,-0.324,1.291)
C5': (11.780,-1.942,2.016)
P: (13.997,-0.866,2.919)
C4': (10.738,-1.606,0.968)
C2': (10.303,-0.476,-1.069)
O2': (9.140,-1.153,-1.505)
N1: (10.796,1.681,0.211)
O4: (12.899,5.088,0.430)
O2: (9.960,2.436,-1.767)
C6: (11.609,1.905,1.306)
C5: (12.342,3.017,1.449)
O3': (11.284,-2.687,-1.107)
N3: (11.438,3.740,-0.632)
OP1: (14.210,-2.061,3.766)
OP2: (15.148,-0.209,2.262)
C2: (10.679,2.609,-0.798)
C1': (9.974,0.433,0.112)
C3': (11.295,-1.440,-0.437)
O5': (12.949,-1.183,1.758)
O4': (10.152,-0.324,1.291)
C5': (11.780,-1.942,2.016)
P: (13.997,-0.866,2.919)
C4': (10.738,-1.606,0.968)
C2': (10.303,-0.476,-1.069)
O2': (9.140,-1.153,-1.505)
N1: (10.796,1.681,0.211)
O4: (12.899,5.088,0.430)
O2: (9.960,2.436,-1.767)
C6: (11.609,1.905,1.306)
C5: (12.342,3.017,1.449)
O3': (11.284,-2.687,-1.107)
OP1: (8.838,0.041,6.734)
OP2: (8.375,2.060,8.251)
C3': (13.281,0.274,5.165)
C1': (14.160,2.386,5.157)
C5': (11.711,0.843,7.009)
O6: (17.043,7.598,5.816)
O4': (12.816,2.545,5.583)
C8: (15.723,3.616,6.786)
C2: (14.902,6.196,3.353)
C6: (16.318,6.754,5.275)
C5: (15.975,5.458,5.734)
C4: (15.145,4.685,4.959)
P: (9.105,1.442,7.128)
C4': (12.196,1.226,5.626)
C2': (14.528,0.997,5.656)
O2': (15.707,0.516,5.043)
N1: (15.724,7.047,4.050)
N2: (14.421,6.648,2.187)
N3: (14.576,4.983,3.770)
N7: (16.334,4.768,6.888)
N9: (14.980,3.501,5.635)
O5': (10.652,1.646,7.501)
O3': (13.216,0.237,3.764)
OP2: (8.375,2.060,8.251)
C3': (13.281,0.274,5.165)
C1': (14.160,2.386,5.157)
C5': (11.711,0.843,7.009)
O6: (17.043,7.598,5.816)
O4': (12.816,2.545,5.583)
C8: (15.723,3.616,6.786)
C2: (14.902,6.196,3.353)
C6: (16.318,6.754,5.275)
C5: (15.975,5.458,5.734)
C4: (15.145,4.685,4.959)
P: (9.105,1.442,7.128)
C4': (12.196,1.226,5.626)
C2': (14.528,0.997,5.656)
O2': (15.707,0.516,5.043)
N1: (15.724,7.047,4.050)
N2: (14.421,6.648,2.187)
N3: (14.576,4.983,3.770)
N7: (16.334,4.768,6.888)
N9: (14.980,3.501,5.635)
O5': (10.652,1.646,7.501)
O3': (13.216,0.237,3.764)
Image (generated by PyMOL):