Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0453:0452
Extra
PDB:
ATOM 1 O3' G A 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 2 P U A 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U A 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U A 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U A 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U A 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U A 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U A 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U A 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U A 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U A 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U A 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U A 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U A 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U A 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U A 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U A 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U A 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U A 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U A 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U A 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A A 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A A 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A A 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A A 454 56.029 149.553 56.441 1.00 45.17 O
TER
ATOM 1 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 2 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 3 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 4 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 5 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
ATOM 6 C5' G B 452 55.691 141.952 48.830 1.00 49.32 C
ATOM 7 C4' G B 452 55.737 142.306 50.306 1.00 49.39 C
ATOM 8 O4' G B 452 55.558 141.115 51.134 1.00 50.10 O
ATOM 9 C3' G B 452 57.043 142.933 50.794 1.00 48.41 C
ATOM 10 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 11 C2' G B 452 57.797 141.725 51.339 1.00 45.57 C
ATOM 12 O2' G B 452 58.815 142.068 52.249 1.00 45.86 O
ATOM 13 C1' G B 452 56.648 141.004 52.034 1.00 44.87 C
ATOM 14 N9 G B 452 56.828 139.605 52.404 1.00 39.33 N
ATOM 15 C8 G B 452 57.416 138.607 51.670 1.00 39.07 C
ATOM 16 N7 G B 452 57.377 137.447 52.264 1.00 37.19 N
ATOM 17 C5 G B 452 56.731 137.699 53.466 1.00 36.32 C
ATOM 18 C6 G B 452 56.381 136.823 54.521 1.00 35.91 C
ATOM 19 O6 G B 452 56.567 135.601 54.602 1.00 38.40 O
ATOM 20 N1 G B 452 55.739 137.497 55.551 1.00 32.82 N
ATOM 21 C2 G B 452 55.458 138.830 55.560 1.00 33.78 C
ATOM 22 N2 G B 452 54.826 139.286 56.640 1.00 34.95 N
ATOM 23 N3 G B 452 55.769 139.656 54.582 1.00 33.88 N
ATOM 24 C4 G B 452 56.400 139.027 53.573 1.00 36.08 C
ATOM 25 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 26 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 27 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 28 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
TER
ATOM 2 P U A 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U A 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U A 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U A 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U A 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U A 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U A 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U A 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U A 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U A 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U A 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U A 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U A 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U A 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U A 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U A 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U A 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U A 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U A 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U A 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A A 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A A 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A A 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A A 454 56.029 149.553 56.441 1.00 45.17 O
TER
ATOM 1 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 2 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 3 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 4 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 5 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
ATOM 6 C5' G B 452 55.691 141.952 48.830 1.00 49.32 C
ATOM 7 C4' G B 452 55.737 142.306 50.306 1.00 49.39 C
ATOM 8 O4' G B 452 55.558 141.115 51.134 1.00 50.10 O
ATOM 9 C3' G B 452 57.043 142.933 50.794 1.00 48.41 C
ATOM 10 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 11 C2' G B 452 57.797 141.725 51.339 1.00 45.57 C
ATOM 12 O2' G B 452 58.815 142.068 52.249 1.00 45.86 O
ATOM 13 C1' G B 452 56.648 141.004 52.034 1.00 44.87 C
ATOM 14 N9 G B 452 56.828 139.605 52.404 1.00 39.33 N
ATOM 15 C8 G B 452 57.416 138.607 51.670 1.00 39.07 C
ATOM 16 N7 G B 452 57.377 137.447 52.264 1.00 37.19 N
ATOM 17 C5 G B 452 56.731 137.699 53.466 1.00 36.32 C
ATOM 18 C6 G B 452 56.381 136.823 54.521 1.00 35.91 C
ATOM 19 O6 G B 452 56.567 135.601 54.602 1.00 38.40 O
ATOM 20 N1 G B 452 55.739 137.497 55.551 1.00 32.82 N
ATOM 21 C2 G B 452 55.458 138.830 55.560 1.00 33.78 C
ATOM 22 N2 G B 452 54.826 139.286 56.640 1.00 34.95 N
ATOM 23 N3 G B 452 55.769 139.656 54.582 1.00 33.88 N
ATOM 24 C4 G B 452 56.400 139.027 53.573 1.00 36.08 C
ATOM 25 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 26 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 27 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 28 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
TER
Atoms:
C4: (53.857,143.128,56.093)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
OP1: (53.460,143.495,47.657)
OP2: (52.048,141.347,47.703)
C3': (57.043,142.933,50.794)
C1': (56.648,141.004,52.034)
C5': (55.691,141.952,48.830)
O6: (56.567,135.601,54.602)
O4': (55.558,141.115,51.134)
C8: (57.416,138.607,51.670)
C2: (55.458,138.830,55.560)
C6: (56.381,136.823,54.521)
C5: (56.731,137.699,53.466)
C4: (56.400,139.027,53.573)
P: (53.113,142.198,48.295)
C4': (55.737,142.306,50.306)
C2': (57.797,141.725,51.339)
O2': (58.815,142.068,52.249)
N1: (55.739,137.497,55.551)
N2: (54.826,139.286,56.640)
N3: (55.769,139.656,54.582)
N7: (57.377,137.447,52.264)
N9: (56.828,139.605,52.404)
O5': (54.434,141.327,48.490)
O3': (56.697,143.803,51.867)
OP2: (52.048,141.347,47.703)
C3': (57.043,142.933,50.794)
C1': (56.648,141.004,52.034)
C5': (55.691,141.952,48.830)
O6: (56.567,135.601,54.602)
O4': (55.558,141.115,51.134)
C8: (57.416,138.607,51.670)
C2: (55.458,138.830,55.560)
C6: (56.381,136.823,54.521)
C5: (56.731,137.699,53.466)
C4: (56.400,139.027,53.573)
P: (53.113,142.198,48.295)
C4': (55.737,142.306,50.306)
C2': (57.797,141.725,51.339)
O2': (58.815,142.068,52.249)
N1: (55.739,137.497,55.551)
N2: (54.826,139.286,56.640)
N3: (55.769,139.656,54.582)
N7: (57.377,137.447,52.264)
N9: (56.828,139.605,52.404)
O5': (54.434,141.327,48.490)
O3': (56.697,143.803,51.867)
Image (generated by PyMOL):