Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11312:11311
Extra
PDB:
ATOM 1 O3' G A1311 64.183 -13.675 52.349 1.00 35.88 O
ATOM 2 P U A1312 63.920 -14.327 53.802 1.00 31.81 P
ATOM 3 OP1 U A1312 64.698 -13.535 54.790 1.00 31.79 O
ATOM 4 OP2 U A1312 64.196 -15.776 53.691 1.00 31.92 O
ATOM 5 O5' U A1312 62.369 -14.102 54.036 1.00 31.65 O
ATOM 6 C5' U A1312 61.869 -12.852 54.398 1.00 31.54 C
ATOM 7 C4' U A1312 60.443 -12.973 54.772 1.00 31.41 C
ATOM 8 O4' U A1312 59.681 -13.597 53.692 1.00 31.44 O
ATOM 9 C3' U A1312 60.164 -13.819 56.001 1.00 31.36 C
ATOM 10 O3' U A1312 60.287 -13.023 57.169 1.00 31.28 O
ATOM 11 C2' U A1312 58.730 -14.335 55.737 1.00 31.29 C
ATOM 12 O2' U A1312 57.791 -13.353 56.082 1.00 31.17 O
ATOM 13 C1' U A1312 58.692 -14.444 54.227 1.00 31.38 C
ATOM 14 N1 U A1312 58.930 -15.780 53.725 1.00 31.49 N
ATOM 15 C2 U A1312 58.034 -16.773 53.940 1.00 31.47 C
ATOM 16 O2 U A1312 57.115 -16.635 54.672 1.00 31.36 O
ATOM 17 N3 U A1312 58.304 -17.951 53.315 1.00 31.61 N
ATOM 18 C4 U A1312 59.389 -18.163 52.513 1.00 31.75 C
ATOM 19 O4 U A1312 59.554 -19.259 52.051 1.00 31.88 O
ATOM 20 C5 U A1312 60.258 -17.071 52.298 1.00 31.76 C
ATOM 21 C6 U A1312 59.990 -15.928 52.883 1.00 31.63 C
ATOM 22 P A A1313 60.590 -13.660 58.567 1.00 32.27 P
ATOM 23 OP1 A A1313 60.129 -12.709 59.566 1.00 32.17 O
ATOM 24 OP2 A A1313 62.101 -14.066 58.594 1.00 32.41 O
ATOM 25 O5' A A1313 59.675 -14.955 58.564 1.00 32.25 O
TER
ATOM 1 O3' A B1310 67.437 -13.601 47.277 1.00 37.21 O
ATOM 2 P G B1311 68.146 -13.925 48.672 1.00 36.57 P
ATOM 3 OP1 G B1311 68.972 -12.762 49.021 1.00 36.58 O
ATOM 4 OP2 G B1311 68.751 -15.217 48.508 1.00 36.72 O
ATOM 5 O5' G B1311 66.948 -14.049 49.698 1.00 36.36 O
ATOM 6 C5' G B1311 65.946 -13.081 49.766 1.00 36.22 C
ATOM 7 C4' G B1311 64.615 -13.729 49.975 1.00 36.10 C
ATOM 8 O4' G B1311 64.399 -14.714 48.954 1.00 36.22 O
ATOM 9 C3' G B1311 64.456 -14.506 51.251 1.00 36.02 C
ATOM 10 O3' G B1311 64.183 -13.675 52.349 1.00 35.88 O
ATOM 11 C2' G B1311 63.309 -15.423 50.921 1.00 35.99 C
ATOM 12 O2' G B1311 62.092 -14.719 51.020 1.00 35.85 O
ATOM 13 C1' G B1311 63.558 -15.706 49.453 1.00 36.15 C
ATOM 14 N9 G B1311 64.157 -17.032 49.176 1.00 36.31 N
ATOM 15 C8 G B1311 65.356 -17.244 48.537 1.00 36.49 C
ATOM 16 N7 G B1311 65.574 -18.511 48.302 1.00 36.63 N
ATOM 17 C5 G B1311 64.450 -19.141 48.767 1.00 36.53 C
ATOM 18 C6 G B1311 64.133 -20.486 48.739 1.00 36.61 C
ATOM 19 O6 G B1311 64.761 -21.442 48.314 1.00 36.80 O
ATOM 20 N1 G B1311 62.914 -20.745 49.295 1.00 36.48 N
ATOM 21 C2 G B1311 62.053 -19.851 49.790 1.00 36.29 C
ATOM 22 N2 G B1311 60.965 -20.466 50.254 1.00 36.21 N
ATOM 23 N3 G B1311 62.307 -18.554 49.809 1.00 36.20 N
ATOM 24 C4 G B1311 63.542 -18.278 49.298 1.00 36.33 C
ATOM 25 P U B1312 63.920 -14.327 53.802 1.00 31.81 P
ATOM 26 OP1 U B1312 64.698 -13.535 54.790 1.00 31.79 O
ATOM 27 OP2 U B1312 64.196 -15.776 53.691 1.00 31.92 O
ATOM 28 O5' U B1312 62.369 -14.102 54.036 1.00 31.65 O
TER
ATOM 2 P U A1312 63.920 -14.327 53.802 1.00 31.81 P
ATOM 3 OP1 U A1312 64.698 -13.535 54.790 1.00 31.79 O
ATOM 4 OP2 U A1312 64.196 -15.776 53.691 1.00 31.92 O
ATOM 5 O5' U A1312 62.369 -14.102 54.036 1.00 31.65 O
ATOM 6 C5' U A1312 61.869 -12.852 54.398 1.00 31.54 C
ATOM 7 C4' U A1312 60.443 -12.973 54.772 1.00 31.41 C
ATOM 8 O4' U A1312 59.681 -13.597 53.692 1.00 31.44 O
ATOM 9 C3' U A1312 60.164 -13.819 56.001 1.00 31.36 C
ATOM 10 O3' U A1312 60.287 -13.023 57.169 1.00 31.28 O
ATOM 11 C2' U A1312 58.730 -14.335 55.737 1.00 31.29 C
ATOM 12 O2' U A1312 57.791 -13.353 56.082 1.00 31.17 O
ATOM 13 C1' U A1312 58.692 -14.444 54.227 1.00 31.38 C
ATOM 14 N1 U A1312 58.930 -15.780 53.725 1.00 31.49 N
ATOM 15 C2 U A1312 58.034 -16.773 53.940 1.00 31.47 C
ATOM 16 O2 U A1312 57.115 -16.635 54.672 1.00 31.36 O
ATOM 17 N3 U A1312 58.304 -17.951 53.315 1.00 31.61 N
ATOM 18 C4 U A1312 59.389 -18.163 52.513 1.00 31.75 C
ATOM 19 O4 U A1312 59.554 -19.259 52.051 1.00 31.88 O
ATOM 20 C5 U A1312 60.258 -17.071 52.298 1.00 31.76 C
ATOM 21 C6 U A1312 59.990 -15.928 52.883 1.00 31.63 C
ATOM 22 P A A1313 60.590 -13.660 58.567 1.00 32.27 P
ATOM 23 OP1 A A1313 60.129 -12.709 59.566 1.00 32.17 O
ATOM 24 OP2 A A1313 62.101 -14.066 58.594 1.00 32.41 O
ATOM 25 O5' A A1313 59.675 -14.955 58.564 1.00 32.25 O
TER
ATOM 1 O3' A B1310 67.437 -13.601 47.277 1.00 37.21 O
ATOM 2 P G B1311 68.146 -13.925 48.672 1.00 36.57 P
ATOM 3 OP1 G B1311 68.972 -12.762 49.021 1.00 36.58 O
ATOM 4 OP2 G B1311 68.751 -15.217 48.508 1.00 36.72 O
ATOM 5 O5' G B1311 66.948 -14.049 49.698 1.00 36.36 O
ATOM 6 C5' G B1311 65.946 -13.081 49.766 1.00 36.22 C
ATOM 7 C4' G B1311 64.615 -13.729 49.975 1.00 36.10 C
ATOM 8 O4' G B1311 64.399 -14.714 48.954 1.00 36.22 O
ATOM 9 C3' G B1311 64.456 -14.506 51.251 1.00 36.02 C
ATOM 10 O3' G B1311 64.183 -13.675 52.349 1.00 35.88 O
ATOM 11 C2' G B1311 63.309 -15.423 50.921 1.00 35.99 C
ATOM 12 O2' G B1311 62.092 -14.719 51.020 1.00 35.85 O
ATOM 13 C1' G B1311 63.558 -15.706 49.453 1.00 36.15 C
ATOM 14 N9 G B1311 64.157 -17.032 49.176 1.00 36.31 N
ATOM 15 C8 G B1311 65.356 -17.244 48.537 1.00 36.49 C
ATOM 16 N7 G B1311 65.574 -18.511 48.302 1.00 36.63 N
ATOM 17 C5 G B1311 64.450 -19.141 48.767 1.00 36.53 C
ATOM 18 C6 G B1311 64.133 -20.486 48.739 1.00 36.61 C
ATOM 19 O6 G B1311 64.761 -21.442 48.314 1.00 36.80 O
ATOM 20 N1 G B1311 62.914 -20.745 49.295 1.00 36.48 N
ATOM 21 C2 G B1311 62.053 -19.851 49.790 1.00 36.29 C
ATOM 22 N2 G B1311 60.965 -20.466 50.254 1.00 36.21 N
ATOM 23 N3 G B1311 62.307 -18.554 49.809 1.00 36.20 N
ATOM 24 C4 G B1311 63.542 -18.278 49.298 1.00 36.33 C
ATOM 25 P U B1312 63.920 -14.327 53.802 1.00 31.81 P
ATOM 26 OP1 U B1312 64.698 -13.535 54.790 1.00 31.79 O
ATOM 27 OP2 U B1312 64.196 -15.776 53.691 1.00 31.92 O
ATOM 28 O5' U B1312 62.369 -14.102 54.036 1.00 31.65 O
TER
Atoms:
C4: (59.389,-18.163,52.513)
N3: (58.304,-17.951,53.315)
OP1: (64.698,-13.535,54.790)
OP2: (64.196,-15.776,53.691)
C2: (58.034,-16.773,53.940)
C1': (58.692,-14.444,54.227)
C3': (60.164,-13.819,56.001)
O5': (62.369,-14.102,54.036)
O4': (59.681,-13.597,53.692)
C5': (61.869,-12.852,54.398)
P: (63.920,-14.327,53.802)
C4': (60.443,-12.973,54.772)
C2': (58.730,-14.335,55.737)
O2': (57.791,-13.353,56.082)
N1: (58.930,-15.780,53.725)
O4: (59.554,-19.259,52.051)
O2: (57.115,-16.635,54.672)
C6: (59.990,-15.928,52.883)
C5: (60.258,-17.071,52.298)
O3': (60.287,-13.023,57.169)
N3: (58.304,-17.951,53.315)
OP1: (64.698,-13.535,54.790)
OP2: (64.196,-15.776,53.691)
C2: (58.034,-16.773,53.940)
C1': (58.692,-14.444,54.227)
C3': (60.164,-13.819,56.001)
O5': (62.369,-14.102,54.036)
O4': (59.681,-13.597,53.692)
C5': (61.869,-12.852,54.398)
P: (63.920,-14.327,53.802)
C4': (60.443,-12.973,54.772)
C2': (58.730,-14.335,55.737)
O2': (57.791,-13.353,56.082)
N1: (58.930,-15.780,53.725)
O4: (59.554,-19.259,52.051)
O2: (57.115,-16.635,54.672)
C6: (59.990,-15.928,52.883)
C5: (60.258,-17.071,52.298)
O3': (60.287,-13.023,57.169)
OP1: (68.972,-12.762,49.021)
OP2: (68.751,-15.217,48.508)
C3': (64.456,-14.506,51.251)
C1': (63.558,-15.706,49.453)
C5': (65.946,-13.081,49.766)
O6: (64.761,-21.442,48.314)
O4': (64.399,-14.714,48.954)
C8: (65.356,-17.244,48.537)
C2: (62.053,-19.851,49.790)
C6: (64.133,-20.486,48.739)
C5: (64.450,-19.141,48.767)
C4: (63.542,-18.278,49.298)
P: (68.146,-13.925,48.672)
C4': (64.615,-13.729,49.975)
C2': (63.309,-15.423,50.921)
O2': (62.092,-14.719,51.020)
N1: (62.914,-20.745,49.295)
N2: (60.965,-20.466,50.254)
N3: (62.307,-18.554,49.809)
N7: (65.574,-18.511,48.302)
N9: (64.157,-17.032,49.176)
O5': (66.948,-14.049,49.698)
O3': (64.183,-13.675,52.349)
OP2: (68.751,-15.217,48.508)
C3': (64.456,-14.506,51.251)
C1': (63.558,-15.706,49.453)
C5': (65.946,-13.081,49.766)
O6: (64.761,-21.442,48.314)
O4': (64.399,-14.714,48.954)
C8: (65.356,-17.244,48.537)
C2: (62.053,-19.851,49.790)
C6: (64.133,-20.486,48.739)
C5: (64.450,-19.141,48.767)
C4: (63.542,-18.278,49.298)
P: (68.146,-13.925,48.672)
C4': (64.615,-13.729,49.975)
C2': (63.309,-15.423,50.921)
O2': (62.092,-14.719,51.020)
N1: (62.914,-20.745,49.295)
N2: (60.965,-20.466,50.254)
N3: (62.307,-18.554,49.809)
N7: (65.574,-18.511,48.302)
N9: (64.157,-17.032,49.176)
O5': (66.948,-14.049,49.698)
O3': (64.183,-13.675,52.349)
Image (generated by PyMOL):