Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0453:0452
Extra
PDB:
ATOM 1 O3' G A 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 2 P U A 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 3 OP1 U A 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 4 OP2 U A 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 5 O5' U A 453 56.354 145.923 52.586 1.00 35.39 O
ATOM 6 C5' U A 453 55.686 146.757 51.627 1.00 34.54 C
ATOM 7 C4' U A 453 54.487 147.407 52.267 1.00 35.38 C
ATOM 8 O4' U A 453 53.424 146.434 52.391 1.00 36.31 O
ATOM 9 C3' U A 453 54.735 147.907 53.679 1.00 35.81 C
ATOM 10 O3' U A 453 55.289 149.218 53.669 1.00 35.68 O
ATOM 11 C2' U A 453 53.348 147.838 54.299 1.00 36.42 C
ATOM 12 O2' U A 453 52.538 148.923 53.911 1.00 36.15 O
ATOM 13 C1' U A 453 52.797 146.560 53.657 1.00 36.46 C
ATOM 14 N1 U A 453 53.047 145.317 54.413 1.00 34.93 N
ATOM 15 C2 U A 453 52.372 145.125 55.607 1.00 35.33 C
ATOM 16 O2 U A 453 51.596 145.940 56.075 1.00 37.56 O
ATOM 17 N3 U A 453 52.644 143.938 56.240 1.00 35.46 N
ATOM 18 C4 U A 453 53.507 142.946 55.820 1.00 35.68 C
ATOM 19 O4 U A 453 53.664 141.941 56.517 1.00 35.77 O
ATOM 20 C5 U A 453 54.170 143.219 54.584 1.00 35.07 C
ATOM 21 C6 U A 453 53.927 144.364 53.941 1.00 34.67 C
ATOM 22 P A A 454 56.500 149.587 54.660 1.00 33.90 P
ATOM 23 OP1 A A 454 56.853 150.997 54.363 1.00 37.09 O
ATOM 24 OP2 A A 454 57.548 148.543 54.573 1.00 32.75 O
ATOM 25 O5' A A 454 55.829 149.546 56.103 1.00 31.41 O
TER
ATOM 1 O3' A B 451 52.284 142.300 49.472 1.00 37.26 O
ATOM 2 P G B 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 3 OP1 G B 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 4 OP2 G B 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 5 O5' G B 452 54.099 141.237 48.128 1.00 37.41 O
ATOM 6 C5' G B 452 55.337 141.862 48.497 1.00 35.31 C
ATOM 7 C4' G B 452 55.353 142.167 49.979 1.00 37.40 C
ATOM 8 O4' G B 452 55.166 140.944 50.758 1.00 38.78 O
ATOM 9 C3' G B 452 56.647 142.785 50.504 1.00 35.44 C
ATOM 10 O3' G B 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 11 C2' G B 452 57.381 141.571 51.052 1.00 33.84 C
ATOM 12 O2' G B 452 58.387 141.907 51.977 1.00 33.64 O
ATOM 13 C1' G B 452 56.211 140.844 51.706 1.00 34.56 C
ATOM 14 N9 G B 452 56.393 139.447 52.086 1.00 32.68 N
ATOM 15 C8 G B 452 56.977 138.440 51.355 1.00 32.84 C
ATOM 16 N7 G B 452 56.974 137.291 51.974 1.00 31.32 N
ATOM 17 C5 G B 452 56.351 137.555 53.186 1.00 31.05 C
ATOM 18 C6 G B 452 56.054 136.693 54.272 1.00 30.88 C
ATOM 19 O6 G B 452 56.284 135.482 54.381 1.00 31.63 O
ATOM 20 N1 G B 452 55.422 137.375 55.307 1.00 29.40 N
ATOM 21 C2 G B 452 55.111 138.710 55.295 1.00 30.51 C
ATOM 22 N2 G B 452 54.507 139.180 56.393 1.00 30.86 N
ATOM 23 N3 G B 452 55.375 139.524 54.283 1.00 28.94 N
ATOM 24 C4 G B 452 55.993 138.883 53.272 1.00 30.89 C
ATOM 25 P U B 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 26 OP1 U B 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 27 OP2 U B 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 28 O5' U B 453 56.354 145.923 52.586 1.00 35.39 O
TER
ATOM 2 P U A 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 3 OP1 U A 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 4 OP2 U A 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 5 O5' U A 453 56.354 145.923 52.586 1.00 35.39 O
ATOM 6 C5' U A 453 55.686 146.757 51.627 1.00 34.54 C
ATOM 7 C4' U A 453 54.487 147.407 52.267 1.00 35.38 C
ATOM 8 O4' U A 453 53.424 146.434 52.391 1.00 36.31 O
ATOM 9 C3' U A 453 54.735 147.907 53.679 1.00 35.81 C
ATOM 10 O3' U A 453 55.289 149.218 53.669 1.00 35.68 O
ATOM 11 C2' U A 453 53.348 147.838 54.299 1.00 36.42 C
ATOM 12 O2' U A 453 52.538 148.923 53.911 1.00 36.15 O
ATOM 13 C1' U A 453 52.797 146.560 53.657 1.00 36.46 C
ATOM 14 N1 U A 453 53.047 145.317 54.413 1.00 34.93 N
ATOM 15 C2 U A 453 52.372 145.125 55.607 1.00 35.33 C
ATOM 16 O2 U A 453 51.596 145.940 56.075 1.00 37.56 O
ATOM 17 N3 U A 453 52.644 143.938 56.240 1.00 35.46 N
ATOM 18 C4 U A 453 53.507 142.946 55.820 1.00 35.68 C
ATOM 19 O4 U A 453 53.664 141.941 56.517 1.00 35.77 O
ATOM 20 C5 U A 453 54.170 143.219 54.584 1.00 35.07 C
ATOM 21 C6 U A 453 53.927 144.364 53.941 1.00 34.67 C
ATOM 22 P A A 454 56.500 149.587 54.660 1.00 33.90 P
ATOM 23 OP1 A A 454 56.853 150.997 54.363 1.00 37.09 O
ATOM 24 OP2 A A 454 57.548 148.543 54.573 1.00 32.75 O
ATOM 25 O5' A A 454 55.829 149.546 56.103 1.00 31.41 O
TER
ATOM 1 O3' A B 451 52.284 142.300 49.472 1.00 37.26 O
ATOM 2 P G B 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 3 OP1 G B 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 4 OP2 G B 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 5 O5' G B 452 54.099 141.237 48.128 1.00 37.41 O
ATOM 6 C5' G B 452 55.337 141.862 48.497 1.00 35.31 C
ATOM 7 C4' G B 452 55.353 142.167 49.979 1.00 37.40 C
ATOM 8 O4' G B 452 55.166 140.944 50.758 1.00 38.78 O
ATOM 9 C3' G B 452 56.647 142.785 50.504 1.00 35.44 C
ATOM 10 O3' G B 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 11 C2' G B 452 57.381 141.571 51.052 1.00 33.84 C
ATOM 12 O2' G B 452 58.387 141.907 51.977 1.00 33.64 O
ATOM 13 C1' G B 452 56.211 140.844 51.706 1.00 34.56 C
ATOM 14 N9 G B 452 56.393 139.447 52.086 1.00 32.68 N
ATOM 15 C8 G B 452 56.977 138.440 51.355 1.00 32.84 C
ATOM 16 N7 G B 452 56.974 137.291 51.974 1.00 31.32 N
ATOM 17 C5 G B 452 56.351 137.555 53.186 1.00 31.05 C
ATOM 18 C6 G B 452 56.054 136.693 54.272 1.00 30.88 C
ATOM 19 O6 G B 452 56.284 135.482 54.381 1.00 31.63 O
ATOM 20 N1 G B 452 55.422 137.375 55.307 1.00 29.40 N
ATOM 21 C2 G B 452 55.111 138.710 55.295 1.00 30.51 C
ATOM 22 N2 G B 452 54.507 139.180 56.393 1.00 30.86 N
ATOM 23 N3 G B 452 55.375 139.524 54.283 1.00 28.94 N
ATOM 24 C4 G B 452 55.993 138.883 53.272 1.00 30.89 C
ATOM 25 P U B 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 26 OP1 U B 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 27 OP2 U B 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 28 O5' U B 453 56.354 145.923 52.586 1.00 35.39 O
TER
Atoms:
C4: (53.507,142.946,55.820)
N3: (52.644,143.938,56.240)
OP1: (58.162,145.232,50.987)
OP2: (57.981,144.216,53.350)
C2: (52.372,145.125,55.607)
C1': (52.797,146.560,53.657)
C3': (54.735,147.907,53.679)
O5': (56.354,145.923,52.586)
O4': (53.424,146.434,52.391)
C5': (55.686,146.757,51.627)
P: (57.322,144.750,52.123)
C4': (54.487,147.407,52.267)
C2': (53.348,147.838,54.299)
O2': (52.538,148.923,53.911)
N1: (53.047,145.317,54.413)
O4: (53.664,141.941,56.517)
O2: (51.596,145.940,56.075)
C6: (53.927,144.364,53.941)
C5: (54.170,143.219,54.584)
O3': (55.289,149.218,53.669)
N3: (52.644,143.938,56.240)
OP1: (58.162,145.232,50.987)
OP2: (57.981,144.216,53.350)
C2: (52.372,145.125,55.607)
C1': (52.797,146.560,53.657)
C3': (54.735,147.907,53.679)
O5': (56.354,145.923,52.586)
O4': (53.424,146.434,52.391)
C5': (55.686,146.757,51.627)
P: (57.322,144.750,52.123)
C4': (54.487,147.407,52.267)
C2': (53.348,147.838,54.299)
O2': (52.538,148.923,53.911)
N1: (53.047,145.317,54.413)
O4: (53.664,141.941,56.517)
O2: (51.596,145.940,56.075)
C6: (53.927,144.364,53.941)
C5: (54.170,143.219,54.584)
O3': (55.289,149.218,53.669)
OP1: (53.079,143.435,47.428)
OP2: (51.779,141.233,47.247)
C3': (56.647,142.785,50.504)
C1': (56.211,140.844,51.706)
C5': (55.337,141.862,48.497)
O6: (56.284,135.482,54.381)
O4': (55.166,140.944,50.758)
C8: (56.977,138.440,51.355)
C2: (55.111,138.710,55.295)
C6: (56.054,136.693,54.272)
C5: (56.351,137.555,53.186)
C4: (55.993,138.883,53.272)
P: (52.760,142.088,47.960)
C4': (55.353,142.167,49.979)
C2': (57.381,141.571,51.052)
O2': (58.387,141.907,51.977)
N1: (55.422,137.375,55.307)
N2: (54.507,139.180,56.393)
N3: (55.375,139.524,54.283)
N7: (56.974,137.291,51.974)
N9: (56.393,139.447,52.086)
O5': (54.099,141.237,48.128)
O3': (56.287,143.645,51.579)
OP2: (51.779,141.233,47.247)
C3': (56.647,142.785,50.504)
C1': (56.211,140.844,51.706)
C5': (55.337,141.862,48.497)
O6: (56.284,135.482,54.381)
O4': (55.166,140.944,50.758)
C8: (56.977,138.440,51.355)
C2: (55.111,138.710,55.295)
C6: (56.054,136.693,54.272)
C5: (56.351,137.555,53.186)
C4: (55.993,138.883,53.272)
P: (52.760,142.088,47.960)
C4': (55.353,142.167,49.979)
C2': (57.381,141.571,51.052)
O2': (58.387,141.907,51.977)
N1: (55.422,137.375,55.307)
N2: (54.507,139.180,56.393)
N3: (55.375,139.524,54.283)
N7: (56.974,137.291,51.974)
N9: (56.393,139.447,52.086)
O5': (54.099,141.237,48.128)
O3': (56.287,143.645,51.579)
Image (generated by PyMOL):