ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A748:A747

Extra

PDB:
ATOM 1 O3' G A 747 -55.712 -39.580 4.536 1.00 1.90 O
ATOM 2 P U A 748 -57.289 -39.415 4.468 1.00 9.87 P
ATOM 3 OP1 U A 748 -57.568 -38.255 5.329 1.00 1.59 O
ATOM 4 OP2 U A 748 -57.993 -40.690 4.717 1.00 1.59 O
ATOM 5 O5' U A 748 -57.528 -39.016 2.942 1.00 0.79 O
ATOM 6 C5' U A 748 -57.804 -37.650 2.557 1.00 0.79 C
ATOM 7 C4' U A 748 -57.872 -37.532 1.053 1.00 0.79 C
ATOM 8 O4' U A 748 -56.552 -37.297 0.518 1.00 0.79 O
ATOM 9 C3' U A 748 -58.435 -38.720 0.283 1.00 0.79 C
ATOM 10 O3' U A 748 -59.866 -38.663 0.235 1.00 0.79 O
ATOM 11 C2' U A 748 -57.815 -38.515 -1.092 1.00 0.79 C
ATOM 12 O2' U A 748 -58.532 -37.560 -1.846 1.00 0.79 O
ATOM 13 C1' U A 748 -56.454 -37.903 -0.744 1.00 0.79 C
ATOM 14 N1 U A 748 -55.386 -38.900 -0.662 1.00 7.42 N
ATOM 15 C2 U A 748 -54.691 -39.196 -1.803 1.00 7.42 C
ATOM 16 O2 U A 748 -54.950 -38.697 -2.883 1.00 7.42 O
ATOM 17 N3 U A 748 -53.690 -40.111 -1.638 1.00 7.42 N
ATOM 18 C4 U A 748 -53.340 -40.755 -0.471 1.00 7.42 C
ATOM 19 O4 U A 748 -52.353 -41.476 -0.450 1.00 7.42 O
ATOM 20 C5 U A 748 -54.125 -40.414 0.651 1.00 7.42 C
ATOM 21 C6 U A 748 -55.094 -39.514 0.524 1.00 7.42 C
ATOM 22 P G A 749 -60.734 -40.002 -0.031 1.00 7.90 P
ATOM 23 OP1 G A 749 -62.175 -39.617 -0.059 1.00 11.10 O
ATOM 24 OP2 G A 749 -60.295 -41.064 0.894 1.00 11.10 O
ATOM 25 O5' G A 749 -60.283 -40.452 -1.495 1.00 16.81 O
TER

ATOM 1 O3' G B 746 -51.518 -38.202 9.579 1.00 2.51 O
ATOM 2 P G B 747 -52.723 -39.263 9.657 1.00 16.12 P
ATOM 3 OP1 G B 747 -53.813 -38.604 10.425 1.00 26.35 O
ATOM 4 OP2 G B 747 -52.197 -40.558 10.119 1.00 26.35 O
ATOM 5 O5' G B 747 -53.224 -39.452 8.153 1.00 1.90 O
ATOM 6 C5' G B 747 -53.883 -38.369 7.456 1.00 1.90 C
ATOM 7 C4' G B 747 -54.108 -38.719 6.004 1.00 1.90 C
ATOM 8 O4' G B 747 -52.856 -39.137 5.412 1.00 1.90 O
ATOM 9 C3' G B 747 -55.093 -39.844 5.761 1.00 1.90 C
ATOM 10 O3' G B 747 -55.712 -39.580 4.536 1.00 1.90 O
ATOM 11 C2' G B 747 -54.207 -41.059 5.553 1.00 1.90 C
ATOM 12 O2' G B 747 -54.781 -41.957 4.628 1.00 1.90 O
ATOM 13 C1' G B 747 -52.986 -40.442 4.894 1.00 1.90 C
ATOM 14 N9 G B 747 -51.748 -41.169 5.153 1.00 13.96 N
ATOM 15 C8 G B 747 -51.178 -41.440 6.370 1.00 13.96 C
ATOM 16 N7 G B 747 -50.021 -42.034 6.269 1.00 13.96 N
ATOM 17 C5 G B 747 -49.825 -42.175 4.906 1.00 13.96 C
ATOM 18 C6 G B 747 -48.736 -42.712 4.190 1.00 13.96 C
ATOM 19 O6 G B 747 -47.676 -43.164 4.620 1.00 13.96 O
ATOM 20 N1 G B 747 -48.954 -42.669 2.828 1.00 13.96 N
ATOM 21 C2 G B 747 -50.068 -42.160 2.230 1.00 13.96 C
ATOM 22 N2 G B 747 -50.086 -42.205 0.905 1.00 13.96 N
ATOM 23 N3 G B 747 -51.085 -41.643 2.879 1.00 13.96 N
ATOM 24 C4 G B 747 -50.896 -41.678 4.206 1.00 13.96 C
ATOM 25 P U B 748 -57.289 -39.415 4.468 1.00 9.87 P
ATOM 26 OP1 U B 748 -57.568 -38.255 5.329 1.00 1.59 O
ATOM 27 OP2 U B 748 -57.993 -40.690 4.717 1.00 1.59 O
ATOM 28 O5' U B 748 -57.528 -39.016 2.942 1.00 0.79 O
TER

Atoms:
C4: (-53.340,-40.755,-0.471)
N3: (-53.690,-40.111,-1.638)
OP1: (-57.568,-38.255,5.329)
OP2: (-57.993,-40.690,4.717)
C2: (-54.691,-39.196,-1.803)
C1': (-56.454,-37.903,-0.744)
C3': (-58.435,-38.720,0.283)
O5': (-57.528,-39.016,2.942)
O4': (-56.552,-37.297,0.518)
C5': (-57.804,-37.650,2.557)
P: (-57.289,-39.415,4.468)
C4': (-57.872,-37.532,1.053)
C2': (-57.815,-38.515,-1.092)
O2': (-58.532,-37.560,-1.846)
N1: (-55.386,-38.900,-0.662)
O4: (-52.353,-41.476,-0.450)
O2: (-54.950,-38.697,-2.883)
C6: (-55.094,-39.514,0.524)
C5: (-54.125,-40.414,0.651)
O3': (-59.866,-38.663,0.235)
OP1: (-53.813,-38.604,10.425)
OP2: (-52.197,-40.558,10.119)
C3': (-55.093,-39.844,5.761)
C1': (-52.986,-40.442,4.894)
C5': (-53.883,-38.369,7.456)
O6: (-47.676,-43.164,4.620)
O4': (-52.856,-39.137,5.412)
C8: (-51.178,-41.440,6.370)
C2: (-50.068,-42.160,2.230)
C6: (-48.736,-42.712,4.190)
C5: (-49.825,-42.175,4.906)
C4: (-50.896,-41.678,4.206)
P: (-52.723,-39.263,9.657)
C4': (-54.108,-38.719,6.004)
C2': (-54.207,-41.059,5.553)
O2': (-54.781,-41.957,4.628)
N1: (-48.954,-42.669,2.828)
N2: (-50.086,-42.205,0.905)
N3: (-51.085,-41.643,2.879)
N7: (-50.021,-42.034,6.269)
N9: (-51.748,-41.169,5.153)
O5': (-53.224,-39.452,8.153)
O3': (-55.712,-39.580,4.536)
Image (generated by PyMOL):
PyMOL image
show in jmol