ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:F4:E7

Extra

PDB:
ATOM 1 O3' A A 3 20.268 -3.409 6.067 1.00 53.15 O
ATOM 2 P A A 4 20.261 -2.905 7.577 1.00 52.70 P
ATOM 3 OP1 A A 4 21.083 -1.665 7.601 1.00 53.51 O
ATOM 4 OP2 A A 4 20.545 -4.080 8.434 1.00 51.54 O
ATOM 5 O5' A A 4 18.744 -2.530 7.847 1.00 52.70 O
ATOM 6 C5' A A 4 17.800 -3.550 7.735 1.00 52.59 C
ATOM 7 C4' A A 4 16.480 -2.972 7.310 1.00 53.57 C
ATOM 8 O4' A A 4 16.298 -3.186 5.898 1.00 53.21 O
ATOM 9 C3' A A 4 15.301 -3.634 7.992 1.00 54.93 C
ATOM 10 O3' A A 4 15.026 -2.898 9.173 1.00 56.57 O
ATOM 11 C2' A A 4 14.206 -3.453 6.955 1.00 55.61 C
ATOM 12 O2' A A 4 13.641 -2.161 7.036 1.00 58.89 O
ATOM 13 C1' A A 4 14.972 -3.611 5.644 1.00 54.82 C
ATOM 14 N9 A A 4 14.979 -4.988 5.119 1.00 53.82 N
ATOM 15 C8 A A 4 15.985 -5.907 5.232 1.00 53.04 C
ATOM 16 N7 A A 4 15.717 -7.062 4.673 1.00 52.09 N
ATOM 17 C5 A A 4 14.461 -6.889 4.141 1.00 52.70 C
ATOM 18 C6 A A 4 13.613 -7.753 3.420 1.00 53.85 C
ATOM 19 N6 A A 4 13.946 -9.004 3.099 1.00 54.37 N
ATOM 20 N1 A A 4 12.403 -7.287 3.043 1.00 55.16 N
ATOM 21 C2 A A 4 12.080 -6.031 3.370 1.00 55.59 C
ATOM 22 N3 A A 4 12.795 -5.131 4.044 1.00 55.11 N
ATOM 23 C4 A A 4 13.986 -5.623 4.407 1.00 53.49 C
ATOM 24 P A A 5 14.356 -3.552 10.457 1.00 56.48 P
ATOM 25 OP1 A A 5 14.172 -2.427 11.414 1.00 60.85 O
ATOM 26 OP2 A A 5 15.133 -4.738 10.872 1.00 54.64 O
ATOM 27 O5' A A 5 12.936 -4.057 9.914 1.00 56.37 O
TER

ATOM 1 O3' G B 6 22.506 -14.894 3.772 1.00 45.71 O
ATOM 2 P U B 7 21.707 -14.919 5.141 1.00 43.50 P
ATOM 3 OP1 U B 7 22.504 -15.702 6.096 1.00 46.24 O
ATOM 4 OP2 U B 7 20.276 -15.265 4.928 1.00 40.44 O
ATOM 5 O5' U B 7 21.720 -13.378 5.538 1.00 43.41 O
ATOM 6 C5' U B 7 22.925 -12.710 5.868 1.00 45.26 C
ATOM 7 C4' U B 7 22.618 -11.267 6.251 1.00 46.23 C
ATOM 8 O4' U B 7 22.042 -10.615 5.093 1.00 46.58 O
ATOM 9 C3' U B 7 21.536 -11.069 7.303 1.00 45.19 C
ATOM 10 O3' U B 7 22.041 -11.197 8.609 1.00 45.52 O
ATOM 11 C2' U B 7 21.112 -9.639 7.007 1.00 45.83 C
ATOM 12 O2' U B 7 22.073 -8.694 7.443 1.00 47.72 O
ATOM 13 C1' U B 7 21.072 -9.659 5.487 1.00 45.13 C
ATOM 14 N1 U B 7 19.714 -9.957 4.894 1.00 43.75 N
ATOM 15 C2 U B 7 18.795 -8.925 4.785 1.00 44.66 C
ATOM 16 O2 U B 7 19.016 -7.791 5.141 1.00 45.65 O
ATOM 17 N3 U B 7 17.590 -9.252 4.232 1.00 44.17 N
ATOM 18 C4 U B 7 17.201 -10.496 3.781 1.00 44.14 C
ATOM 19 O4 U B 7 16.071 -10.635 3.321 1.00 42.89 O
ATOM 20 C5 U B 7 18.203 -11.533 3.913 1.00 43.21 C
ATOM 21 C6 U B 7 19.398 -11.228 4.453 1.00 43.48 C
ATOM 22 P U B 8 21.068 -11.716 9.786 1.00 46.50 P
ATOM 23 OP1 U B 8 21.907 -11.920 10.972 1.00 48.68 O
ATOM 24 OP2 U B 8 20.262 -12.861 9.313 1.00 45.13 O
ATOM 25 O5' U B 8 20.061 -10.507 10.036 1.00 45.02 O
TER

Atoms:
OP1: (21.083,-1.665,7.601)
OP2: (20.545,-4.080,8.434)
C3': (15.301,-3.634,7.992)
C1': (14.972,-3.611,5.644)
C5': (17.800,-3.550,7.735)
O4': (16.298,-3.186,5.898)
C8: (15.985,-5.907,5.232)
O2': (13.641,-2.161,7.036)
C6: (13.613,-7.753,3.420)
C5: (14.461,-6.889,4.141)
C4: (13.986,-5.623,4.407)
P: (20.261,-2.905,7.577)
C4': (16.480,-2.972,7.310)
C2': (14.206,-3.453,6.955)
C2: (12.080,-6.031,3.370)
N1: (12.403,-7.287,3.043)
N3: (12.795,-5.131,4.044)
N6: (13.946,-9.004,3.099)
N7: (15.717,-7.062,4.673)
N9: (14.979,-4.988,5.119)
O5': (18.744,-2.530,7.847)
O3': (15.026,-2.898,9.173)
C4: (17.201,-10.496,3.781)
N3: (17.590,-9.252,4.232)
OP1: (22.504,-15.702,6.096)
OP2: (20.276,-15.265,4.928)
C2: (18.795,-8.925,4.785)
C1': (21.072,-9.659,5.487)
C3': (21.536,-11.069,7.303)
O5': (21.720,-13.378,5.538)
O4': (22.042,-10.615,5.093)
C5': (22.925,-12.710,5.868)
P: (21.707,-14.919,5.141)
C4': (22.618,-11.267,6.251)
C2': (21.112,-9.639,7.007)
O2': (22.073,-8.694,7.443)
N1: (19.714,-9.957,4.894)
O4: (16.071,-10.635,3.321)
O2: (19.016,-7.791,5.141)
C6: (19.398,-11.228,4.453)
C5: (18.203,-11.533,3.913)
O3': (22.041,-11.197,8.609)
Image (generated by PyMOL):
PyMOL image
show in jmol