Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0577:0576
Extra
PDB:
ATOM 1 O3' G A 576 -7.887 89.886 106.540 1.00 65.25 O
ATOM 2 P U A 577 -8.279 90.867 105.325 1.00 66.41 P
ATOM 3 OP1 U A 577 -8.921 90.066 104.243 1.00 64.37 O
ATOM 4 OP2 U A 577 -7.103 91.719 105.009 1.00 65.42 O
ATOM 5 O5' U A 577 -9.359 91.834 105.986 1.00 65.61 O
ATOM 6 C5' U A 577 -10.649 91.342 106.419 1.00 63.68 C
ATOM 7 C4' U A 577 -11.106 92.091 107.647 1.00 61.22 C
ATOM 8 O4' U A 577 -10.389 91.614 108.812 1.00 60.58 O
ATOM 9 C3' U A 577 -10.830 93.582 107.622 1.00 62.32 C
ATOM 10 O3' U A 577 -11.815 94.288 106.877 1.00 62.99 O
ATOM 11 C2' U A 577 -10.803 93.948 109.103 1.00 62.34 C
ATOM 12 O2' U A 577 -12.077 94.179 109.671 1.00 63.65 O
ATOM 13 C1' U A 577 -10.182 92.689 109.720 1.00 60.70 C
ATOM 14 N1 U A 577 -8.743 92.784 110.031 1.00 59.74 N
ATOM 15 C2 U A 577 -8.339 93.720 110.982 1.00 59.12 C
ATOM 16 O2 U A 577 -9.113 94.455 111.572 1.00 58.36 O
ATOM 17 N3 U A 577 -6.988 93.759 111.217 1.00 57.99 N
ATOM 18 C4 U A 577 -6.019 92.981 110.630 1.00 58.40 C
ATOM 19 O4 U A 577 -4.839 93.168 110.927 1.00 60.12 O
ATOM 20 C5 U A 577 -6.507 92.033 109.673 1.00 58.18 C
ATOM 21 C6 U A 577 -7.815 91.971 109.408 1.00 58.90 C
ATOM 22 P A A 578 -11.408 95.628 106.093 1.00 64.00 P
ATOM 23 OP1 A A 578 -12.594 96.133 105.361 1.00 65.19 O
ATOM 24 OP2 A A 578 -10.162 95.340 105.344 1.00 65.04 O
ATOM 25 O5' A A 578 -11.093 96.659 107.262 1.00 62.32 O
TER
ATOM 1 O3' A B 575 -8.943 87.285 110.318 1.00 67.10 O
ATOM 2 P G B 576 -9.249 85.850 109.676 1.00 69.56 P
ATOM 3 OP1 G B 576 -10.719 85.663 109.737 1.00 71.65 O
ATOM 4 OP2 G B 576 -8.353 84.856 110.327 1.00 68.96 O
ATOM 5 O5' G B 576 -8.850 86.014 108.137 1.00 69.21 O
ATOM 6 C5' G B 576 -7.510 86.381 107.750 1.00 66.28 C
ATOM 7 C4' G B 576 -7.380 87.889 107.662 1.00 64.87 C
ATOM 8 O4' G B 576 -6.120 88.302 108.237 1.00 63.89 O
ATOM 9 C3' G B 576 -7.429 88.551 106.291 1.00 63.77 C
ATOM 10 O3' G B 576 -7.887 89.886 106.540 1.00 65.25 O
ATOM 11 C2' G B 576 -5.953 88.523 105.896 1.00 62.07 C
ATOM 12 O2' G B 576 -5.593 89.466 104.909 1.00 61.76 O
ATOM 13 C1' G B 576 -5.296 88.862 107.235 1.00 60.53 C
ATOM 14 N9 G B 576 -3.949 88.360 107.473 1.00 56.19 N
ATOM 15 C8 G B 576 -3.382 87.202 107.000 1.00 54.35 C
ATOM 16 N7 G B 576 -2.182 86.997 107.462 1.00 53.20 N
ATOM 17 C5 G B 576 -1.938 88.096 108.276 1.00 53.27 C
ATOM 18 C6 G B 576 -0.809 88.423 109.055 1.00 53.40 C
ATOM 19 O6 G B 576 0.238 87.781 109.194 1.00 54.04 O
ATOM 20 N1 G B 576 -0.981 89.631 109.724 1.00 52.58 N
ATOM 21 C2 G B 576 -2.099 90.419 109.654 1.00 51.95 C
ATOM 22 N2 G B 576 -2.075 91.555 110.371 1.00 51.78 N
ATOM 23 N3 G B 576 -3.161 90.119 108.936 1.00 51.51 N
ATOM 24 C4 G B 576 -3.012 88.952 108.277 1.00 53.16 C
ATOM 25 P U B 577 -8.279 90.867 105.325 1.00 66.41 P
ATOM 26 OP1 U B 577 -8.921 90.066 104.243 1.00 64.37 O
ATOM 27 OP2 U B 577 -7.103 91.719 105.009 1.00 65.42 O
ATOM 28 O5' U B 577 -9.359 91.834 105.986 1.00 65.61 O
TER
ATOM 2 P U A 577 -8.279 90.867 105.325 1.00 66.41 P
ATOM 3 OP1 U A 577 -8.921 90.066 104.243 1.00 64.37 O
ATOM 4 OP2 U A 577 -7.103 91.719 105.009 1.00 65.42 O
ATOM 5 O5' U A 577 -9.359 91.834 105.986 1.00 65.61 O
ATOM 6 C5' U A 577 -10.649 91.342 106.419 1.00 63.68 C
ATOM 7 C4' U A 577 -11.106 92.091 107.647 1.00 61.22 C
ATOM 8 O4' U A 577 -10.389 91.614 108.812 1.00 60.58 O
ATOM 9 C3' U A 577 -10.830 93.582 107.622 1.00 62.32 C
ATOM 10 O3' U A 577 -11.815 94.288 106.877 1.00 62.99 O
ATOM 11 C2' U A 577 -10.803 93.948 109.103 1.00 62.34 C
ATOM 12 O2' U A 577 -12.077 94.179 109.671 1.00 63.65 O
ATOM 13 C1' U A 577 -10.182 92.689 109.720 1.00 60.70 C
ATOM 14 N1 U A 577 -8.743 92.784 110.031 1.00 59.74 N
ATOM 15 C2 U A 577 -8.339 93.720 110.982 1.00 59.12 C
ATOM 16 O2 U A 577 -9.113 94.455 111.572 1.00 58.36 O
ATOM 17 N3 U A 577 -6.988 93.759 111.217 1.00 57.99 N
ATOM 18 C4 U A 577 -6.019 92.981 110.630 1.00 58.40 C
ATOM 19 O4 U A 577 -4.839 93.168 110.927 1.00 60.12 O
ATOM 20 C5 U A 577 -6.507 92.033 109.673 1.00 58.18 C
ATOM 21 C6 U A 577 -7.815 91.971 109.408 1.00 58.90 C
ATOM 22 P A A 578 -11.408 95.628 106.093 1.00 64.00 P
ATOM 23 OP1 A A 578 -12.594 96.133 105.361 1.00 65.19 O
ATOM 24 OP2 A A 578 -10.162 95.340 105.344 1.00 65.04 O
ATOM 25 O5' A A 578 -11.093 96.659 107.262 1.00 62.32 O
TER
ATOM 1 O3' A B 575 -8.943 87.285 110.318 1.00 67.10 O
ATOM 2 P G B 576 -9.249 85.850 109.676 1.00 69.56 P
ATOM 3 OP1 G B 576 -10.719 85.663 109.737 1.00 71.65 O
ATOM 4 OP2 G B 576 -8.353 84.856 110.327 1.00 68.96 O
ATOM 5 O5' G B 576 -8.850 86.014 108.137 1.00 69.21 O
ATOM 6 C5' G B 576 -7.510 86.381 107.750 1.00 66.28 C
ATOM 7 C4' G B 576 -7.380 87.889 107.662 1.00 64.87 C
ATOM 8 O4' G B 576 -6.120 88.302 108.237 1.00 63.89 O
ATOM 9 C3' G B 576 -7.429 88.551 106.291 1.00 63.77 C
ATOM 10 O3' G B 576 -7.887 89.886 106.540 1.00 65.25 O
ATOM 11 C2' G B 576 -5.953 88.523 105.896 1.00 62.07 C
ATOM 12 O2' G B 576 -5.593 89.466 104.909 1.00 61.76 O
ATOM 13 C1' G B 576 -5.296 88.862 107.235 1.00 60.53 C
ATOM 14 N9 G B 576 -3.949 88.360 107.473 1.00 56.19 N
ATOM 15 C8 G B 576 -3.382 87.202 107.000 1.00 54.35 C
ATOM 16 N7 G B 576 -2.182 86.997 107.462 1.00 53.20 N
ATOM 17 C5 G B 576 -1.938 88.096 108.276 1.00 53.27 C
ATOM 18 C6 G B 576 -0.809 88.423 109.055 1.00 53.40 C
ATOM 19 O6 G B 576 0.238 87.781 109.194 1.00 54.04 O
ATOM 20 N1 G B 576 -0.981 89.631 109.724 1.00 52.58 N
ATOM 21 C2 G B 576 -2.099 90.419 109.654 1.00 51.95 C
ATOM 22 N2 G B 576 -2.075 91.555 110.371 1.00 51.78 N
ATOM 23 N3 G B 576 -3.161 90.119 108.936 1.00 51.51 N
ATOM 24 C4 G B 576 -3.012 88.952 108.277 1.00 53.16 C
ATOM 25 P U B 577 -8.279 90.867 105.325 1.00 66.41 P
ATOM 26 OP1 U B 577 -8.921 90.066 104.243 1.00 64.37 O
ATOM 27 OP2 U B 577 -7.103 91.719 105.009 1.00 65.42 O
ATOM 28 O5' U B 577 -9.359 91.834 105.986 1.00 65.61 O
TER
Atoms:
C4: (-6.019,92.981,110.630)
N3: (-6.988,93.759,111.217)
OP1: (-8.921,90.066,104.243)
OP2: (-7.103,91.719,105.009)
C2: (-8.339,93.720,110.982)
C1': (-10.182,92.689,109.720)
C3': (-10.830,93.582,107.622)
O5': (-9.359,91.834,105.986)
O4': (-10.389,91.614,108.812)
C5': (-10.649,91.342,106.419)
P: (-8.279,90.867,105.325)
C4': (-11.106,92.091,107.647)
C2': (-10.803,93.948,109.103)
O2': (-12.077,94.179,109.671)
N1: (-8.743,92.784,110.031)
O4: (-4.839,93.168,110.927)
O2: (-9.113,94.455,111.572)
C6: (-7.815,91.971,109.408)
C5: (-6.507,92.033,109.673)
O3': (-11.815,94.288,106.877)
N3: (-6.988,93.759,111.217)
OP1: (-8.921,90.066,104.243)
OP2: (-7.103,91.719,105.009)
C2: (-8.339,93.720,110.982)
C1': (-10.182,92.689,109.720)
C3': (-10.830,93.582,107.622)
O5': (-9.359,91.834,105.986)
O4': (-10.389,91.614,108.812)
C5': (-10.649,91.342,106.419)
P: (-8.279,90.867,105.325)
C4': (-11.106,92.091,107.647)
C2': (-10.803,93.948,109.103)
O2': (-12.077,94.179,109.671)
N1: (-8.743,92.784,110.031)
O4: (-4.839,93.168,110.927)
O2: (-9.113,94.455,111.572)
C6: (-7.815,91.971,109.408)
C5: (-6.507,92.033,109.673)
O3': (-11.815,94.288,106.877)
OP1: (-10.719,85.663,109.737)
OP2: (-8.353,84.856,110.327)
C3': (-7.429,88.551,106.291)
C1': (-5.296,88.862,107.235)
C5': (-7.510,86.381,107.750)
O6: (0.238,87.781,109.194)
O4': (-6.120,88.302,108.237)
C8: (-3.382,87.202,107.000)
C2: (-2.099,90.419,109.654)
C6: (-0.809,88.423,109.055)
C5: (-1.938,88.096,108.276)
C4: (-3.012,88.952,108.277)
P: (-9.249,85.850,109.676)
C4': (-7.380,87.889,107.662)
C2': (-5.953,88.523,105.896)
O2': (-5.593,89.466,104.909)
N1: (-0.981,89.631,109.724)
N2: (-2.075,91.555,110.371)
N3: (-3.161,90.119,108.936)
N7: (-2.182,86.997,107.462)
N9: (-3.949,88.360,107.473)
O5': (-8.850,86.014,108.137)
O3': (-7.887,89.886,106.540)
OP2: (-8.353,84.856,110.327)
C3': (-7.429,88.551,106.291)
C1': (-5.296,88.862,107.235)
C5': (-7.510,86.381,107.750)
O6: (0.238,87.781,109.194)
O4': (-6.120,88.302,108.237)
C8: (-3.382,87.202,107.000)
C2: (-2.099,90.419,109.654)
C6: (-0.809,88.423,109.055)
C5: (-1.938,88.096,108.276)
C4: (-3.012,88.952,108.277)
P: (-9.249,85.850,109.676)
C4': (-7.380,87.889,107.662)
C2': (-5.953,88.523,105.896)
O2': (-5.593,89.466,104.909)
N1: (-0.981,89.631,109.724)
N2: (-2.075,91.555,110.371)
N3: (-3.161,90.119,108.936)
N7: (-2.182,86.997,107.462)
N9: (-3.949,88.360,107.473)
O5': (-8.850,86.014,108.137)
O3': (-7.887,89.886,106.540)
Image (generated by PyMOL):