ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:0347:0346

Extra

PDB:
ATOM 1 O3' G A 346 59.017 123.531 8.473 1.00 88.59 O
ATOM 2 P U A 347 59.923 122.434 7.710 1.00 88.10 P
ATOM 3 OP1 U A 347 61.249 122.317 8.376 1.00 89.05 O
ATOM 4 OP2 U A 347 59.858 122.733 6.251 1.00 89.05 O
ATOM 5 O5' U A 347 59.117 121.074 7.919 1.00 87.38 O
ATOM 6 C5' U A 347 59.208 120.325 9.150 1.00 85.06 C
ATOM 7 C4' U A 347 57.871 119.703 9.480 1.00 84.54 C
ATOM 8 O4' U A 347 56.922 120.751 9.794 1.00 83.34 O
ATOM 9 C3' U A 347 57.205 118.912 8.363 1.00 85.45 C
ATOM 10 O3' U A 347 57.715 117.577 8.323 1.00 89.12 O
ATOM 11 C2' U A 347 55.730 118.959 8.758 1.00 83.56 C
ATOM 12 O2' U A 347 55.384 118.001 9.735 1.00 82.62 O
ATOM 13 C1' U A 347 55.624 120.347 9.397 1.00 82.60 C
ATOM 14 N1 U A 347 55.017 121.408 8.575 1.00 81.54 N
ATOM 15 C2 U A 347 53.670 121.285 8.261 1.00 81.25 C
ATOM 16 O2 U A 347 52.993 120.324 8.595 1.00 80.95 O
ATOM 17 N3 U A 347 53.144 122.333 7.544 1.00 81.15 N
ATOM 18 C4 U A 347 53.803 123.468 7.116 1.00 80.15 C
ATOM 19 O4 U A 347 53.176 124.335 6.503 1.00 78.83 O
ATOM 20 C5 U A 347 55.197 123.511 7.449 1.00 79.53 C
ATOM 21 C6 U A 347 55.744 122.505 8.144 1.00 80.51 C
ATOM 22 P A A 348 57.677 116.733 6.949 1.00 91.14 P
ATOM 23 OP1 A A 348 58.212 115.377 7.271 1.00 89.76 O
ATOM 24 OP2 A A 348 58.315 117.529 5.872 1.00 91.17 O
ATOM 25 O5' A A 348 56.120 116.612 6.613 1.00 90.57 O
TER

ATOM 1 O3' A B 345 56.741 125.260 12.505 1.00 83.39 O
ATOM 2 P G B 346 58.139 125.542 13.243 1.00 83.91 P
ATOM 3 OP1 G B 346 58.466 124.370 14.088 1.00 85.07 O
ATOM 4 OP2 G B 346 58.065 126.891 13.853 1.00 85.35 O
ATOM 5 O5' G B 346 59.200 125.580 12.055 1.00 86.63 O
ATOM 6 C5' G B 346 58.950 126.369 10.880 1.00 87.88 C
ATOM 7 C4' G B 346 58.504 125.482 9.741 1.00 88.18 C
ATOM 8 O4' G B 346 57.756 126.279 8.787 1.00 88.19 O
ATOM 9 C3' G B 346 59.591 124.768 8.935 1.00 88.08 C
ATOM 10 O3' G B 346 59.017 123.531 8.473 1.00 88.59 O
ATOM 11 C2' G B 346 59.806 125.752 7.786 1.00 87.77 C
ATOM 12 O2' G B 346 60.395 125.192 6.631 1.00 88.59 O
ATOM 13 C1' G B 346 58.364 126.180 7.518 1.00 87.71 C
ATOM 14 N9 G B 346 58.141 127.436 6.813 1.00 87.58 N
ATOM 15 C8 G B 346 59.015 128.481 6.626 1.00 87.79 C
ATOM 16 N7 G B 346 58.491 129.472 5.956 1.00 87.87 N
ATOM 17 C5 G B 346 57.194 129.053 5.685 1.00 88.23 C
ATOM 18 C6 G B 346 56.145 129.703 4.989 1.00 88.65 C
ATOM 19 O6 G B 346 56.150 130.822 4.459 1.00 90.11 O
ATOM 20 N1 G B 346 54.997 128.915 4.943 1.00 88.58 N
ATOM 21 C2 G B 346 54.872 127.665 5.498 1.00 87.28 C
ATOM 22 N2 G B 346 53.683 127.064 5.346 1.00 86.11 N
ATOM 23 N3 G B 346 55.839 127.051 6.152 1.00 86.80 N
ATOM 24 C4 G B 346 56.965 127.798 6.205 1.00 87.81 C
ATOM 25 P U B 347 59.923 122.434 7.710 1.00 88.10 P
ATOM 26 OP1 U B 347 61.249 122.317 8.376 1.00 89.05 O
ATOM 27 OP2 U B 347 59.858 122.733 6.251 1.00 89.05 O
ATOM 28 O5' U B 347 59.117 121.074 7.919 1.00 87.38 O
TER

Atoms:
C4: (53.803,123.468,7.116)
N3: (53.144,122.333,7.544)
OP1: (61.249,122.317,8.376)
OP2: (59.858,122.733,6.251)
C2: (53.670,121.285,8.261)
C1': (55.624,120.347,9.397)
C3': (57.205,118.912,8.363)
O5': (59.117,121.074,7.919)
O4': (56.922,120.751,9.794)
C5': (59.208,120.325,9.150)
P: (59.923,122.434,7.710)
C4': (57.871,119.703,9.480)
C2': (55.730,118.959,8.758)
O2': (55.384,118.001,9.735)
N1: (55.017,121.408,8.575)
O4: (53.176,124.335,6.503)
O2: (52.993,120.324,8.595)
C6: (55.744,122.505,8.144)
C5: (55.197,123.511,7.449)
O3': (57.715,117.577,8.323)
OP1: (58.466,124.370,14.088)
OP2: (58.065,126.891,13.853)
C3': (59.591,124.768,8.935)
C1': (58.364,126.180,7.518)
C5': (58.950,126.369,10.880)
O6: (56.150,130.822,4.459)
O4': (57.756,126.279,8.787)
C8: (59.015,128.481,6.626)
C2: (54.872,127.665,5.498)
C6: (56.145,129.703,4.989)
C5: (57.194,129.053,5.685)
C4: (56.965,127.798,6.205)
P: (58.139,125.542,13.243)
C4': (58.504,125.482,9.741)
C2': (59.806,125.752,7.786)
O2': (60.395,125.192,6.631)
N1: (54.997,128.915,4.943)
N2: (53.683,127.064,5.346)
N3: (55.839,127.051,6.152)
N7: (58.491,129.472,5.956)
N9: (58.141,127.436,6.813)
O5': (59.200,125.580,12.055)
O3': (59.017,123.531,8.473)
Image (generated by PyMOL):
PyMOL image
show in jmol