ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01918:01917

Extra

PDB:
ATOM 1 O3' G A1917 117.108 110.677 101.984 1.00 59.72 O
ATOM 2 P U A1918 117.391 111.127 103.498 1.00 60.92 P
ATOM 3 OP1 U A1918 117.543 109.931 104.365 1.00 62.49 O
ATOM 4 OP2 U A1918 116.383 112.157 103.855 1.00 60.67 O
ATOM 5 O5' U A1918 118.804 111.848 103.379 1.00 61.73 O
ATOM 6 C5' U A1918 120.005 111.099 103.084 1.00 60.23 C
ATOM 7 C4' U A1918 120.985 111.964 102.329 1.00 59.51 C
ATOM 8 O4' U A1918 120.732 111.900 100.906 1.00 60.27 O
ATOM 9 C3' U A1918 120.926 113.442 102.661 1.00 58.56 C
ATOM 10 O3' U A1918 121.654 113.725 103.842 1.00 58.74 O
ATOM 11 C2' U A1918 121.530 114.076 101.419 1.00 59.53 C
ATOM 12 O2' U A1918 122.940 113.995 101.399 1.00 59.56 O
ATOM 13 C1' U A1918 120.976 113.169 100.321 1.00 59.54 C
ATOM 14 N1 U A1918 119.725 113.636 99.704 1.00 61.07 N
ATOM 15 C2 U A1918 119.783 114.686 98.794 1.00 61.34 C
ATOM 16 O2 U A1918 120.808 115.301 98.541 1.00 59.29 O
ATOM 17 N3 U A1918 118.588 114.990 98.191 1.00 62.37 N
ATOM 18 C4 U A1918 117.367 114.376 98.402 1.00 62.18 C
ATOM 19 O4 U A1918 116.417 114.653 97.672 1.00 62.23 O
ATOM 20 C5 U A1918 117.382 113.346 99.389 1.00 61.98 C
ATOM 21 C6 U A1918 118.526 113.022 99.992 1.00 61.44 C
ATOM 22 P A A1919 121.106 114.827 104.871 1.00 59.41 P
ATOM 23 OP1 A A1919 121.584 114.450 106.216 1.00 61.70 O
ATOM 24 OP2 A A1919 119.655 115.020 104.646 1.00 59.79 O
ATOM 25 O5' A A1919 121.876 116.148 104.435 1.00 58.71 O
TER

ATOM 1 O3' G B1916 116.740 104.235 100.769 1.00 62.46 O
ATOM 2 P G B1917 117.532 105.494 101.350 1.00 61.60 P
ATOM 3 OP1 G B1917 118.931 105.448 100.856 1.00 61.14 O
ATOM 4 OP2 G B1917 117.268 105.530 102.806 1.00 60.72 O
ATOM 5 O5' G B1917 116.749 106.714 100.688 1.00 63.02 O
ATOM 6 C5' G B1917 117.425 107.680 99.871 1.00 61.56 C
ATOM 7 C4' G B1917 116.956 109.075 100.216 1.00 60.12 C
ATOM 8 O4' G B1917 115.716 109.377 99.519 1.00 59.01 O
ATOM 9 C3' G B1917 116.668 109.355 101.697 1.00 59.25 C
ATOM 10 O3' G B1917 117.108 110.677 101.984 1.00 59.72 O
ATOM 11 C2' G B1917 115.143 109.367 101.733 1.00 58.18 C
ATOM 12 O2' G B1917 114.634 110.097 102.830 1.00 57.92 O
ATOM 13 C1' G B1917 114.882 110.076 100.409 1.00 59.07 C
ATOM 14 N9 G B1917 113.530 110.171 99.863 1.00 58.80 N
ATOM 15 C8 G B1917 112.436 109.400 100.163 1.00 58.80 C
ATOM 16 N7 G B1917 111.360 109.775 99.529 1.00 59.15 N
ATOM 17 C5 G B1917 111.771 110.852 98.757 1.00 59.31 C
ATOM 18 C6 G B1917 111.041 111.676 97.866 1.00 60.15 C
ATOM 19 O6 G B1917 109.844 111.618 97.570 1.00 62.51 O
ATOM 20 N1 G B1917 111.846 112.653 97.295 1.00 59.46 N
ATOM 21 C2 G B1917 113.181 112.817 97.545 1.00 59.43 C
ATOM 22 N2 G B1917 113.786 113.820 96.896 1.00 59.11 N
ATOM 23 N3 G B1917 113.873 112.055 98.371 1.00 59.22 N
ATOM 24 C4 G B1917 113.108 111.101 98.942 1.00 58.50 C
ATOM 25 P U B1918 117.391 111.127 103.498 1.00 60.92 P
ATOM 26 OP1 U B1918 117.543 109.931 104.365 1.00 62.49 O
ATOM 27 OP2 U B1918 116.383 112.157 103.855 1.00 60.67 O
ATOM 28 O5' U B1918 118.804 111.848 103.379 1.00 61.73 O
TER

Atoms:
C4: (117.367,114.376,98.402)
N3: (118.588,114.990,98.191)
OP1: (117.543,109.931,104.365)
OP2: (116.383,112.157,103.855)
C2: (119.783,114.686,98.794)
C1': (120.976,113.169,100.321)
C3': (120.926,113.442,102.661)
O5': (118.804,111.848,103.379)
O4': (120.732,111.900,100.906)
C5': (120.005,111.099,103.084)
P: (117.391,111.127,103.498)
C4': (120.985,111.964,102.329)
C2': (121.530,114.076,101.419)
O2': (122.940,113.995,101.399)
N1: (119.725,113.636,99.704)
O4: (116.417,114.653,97.672)
O2: (120.808,115.301,98.541)
C6: (118.526,113.022,99.992)
C5: (117.382,113.346,99.389)
O3': (121.654,113.725,103.842)
OP1: (118.931,105.448,100.856)
OP2: (117.268,105.530,102.806)
C3': (116.668,109.355,101.697)
C1': (114.882,110.076,100.409)
C5': (117.425,107.680,99.871)
O6: (109.844,111.618,97.570)
O4': (115.716,109.377,99.519)
C8: (112.436,109.400,100.163)
C2: (113.181,112.817,97.545)
C6: (111.041,111.676,97.866)
C5: (111.771,110.852,98.757)
C4: (113.108,111.101,98.942)
P: (117.532,105.494,101.350)
C4': (116.956,109.075,100.216)
C2': (115.143,109.367,101.733)
O2': (114.634,110.097,102.830)
N1: (111.846,112.653,97.295)
N2: (113.786,113.820,96.896)
N3: (113.873,112.055,98.371)
N7: (111.360,109.775,99.529)
N9: (113.530,110.171,99.863)
O5': (116.749,106.714,100.688)
O3': (117.108,110.677,101.984)
Image (generated by PyMOL):
PyMOL image
show in jmol