ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:978:977

Extra

PDB:
ATOM 1 O3' G A 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 2 P U A 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 3 OP1 U A 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 4 OP2 U A 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 5 O5' U A 78 40.792 67.884 123.408 1.00 56.05 O
ATOM 6 C5' U A 78 41.001 67.977 124.823 1.00 54.47 C
ATOM 7 C4' U A 78 42.400 67.537 125.157 1.00 54.72 C
ATOM 8 O4' U A 78 42.507 66.099 125.023 1.00 54.85 O
ATOM 9 C3' U A 78 43.462 68.083 124.224 1.00 54.49 C
ATOM 10 O3' U A 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 11 C2' U A 78 44.574 67.056 124.365 1.00 54.51 C
ATOM 12 O2' U A 78 45.326 67.213 125.550 1.00 55.20 O
ATOM 13 C1' U A 78 43.768 65.761 124.478 1.00 53.96 C
ATOM 14 N1 U A 78 43.549 65.065 123.200 1.00 54.56 N
ATOM 15 C2 U A 78 44.667 64.682 122.476 1.00 54.48 C
ATOM 16 O2 U A 78 45.809 64.921 122.841 1.00 53.29 O
ATOM 17 N3 U A 78 44.400 64.008 121.310 1.00 54.08 N
ATOM 18 C4 U A 78 43.160 63.679 120.803 1.00 55.35 C
ATOM 19 O4 U A 78 43.091 63.009 119.767 1.00 55.05 O
ATOM 20 C5 U A 78 42.049 64.121 121.599 1.00 54.28 C
ATOM 21 C6 U A 78 42.275 64.785 122.736 1.00 53.83 C
ATOM 22 P A A 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 23 OP1 A A 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 24 OP2 A A 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 25 O5' A A 79 45.231 69.983 122.625 1.00 55.63 O
TER

ATOM 1 O3' A B 76 39.492 62.312 125.754 1.00 65.11 O
ATOM 2 P G B 77 38.076 61.824 126.321 1.00 67.86 P
ATOM 3 OP1 G B 77 37.813 62.651 127.535 1.00 65.92 O
ATOM 4 OP2 G B 77 38.109 60.333 126.431 1.00 67.23 O
ATOM 5 O5' G B 77 37.045 62.222 125.171 1.00 64.25 O
ATOM 6 C5' G B 77 36.798 63.605 124.844 1.00 61.97 C
ATOM 7 C4' G B 77 37.881 64.117 123.922 1.00 60.20 C
ATOM 8 O4' G B 77 37.932 63.294 122.719 1.00 58.94 O
ATOM 9 C3' G B 77 37.756 65.558 123.432 1.00 58.41 C
ATOM 10 O3' G B 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 11 C2' G B 77 37.107 65.372 122.065 1.00 56.56 C
ATOM 12 O2' G B 77 37.315 66.450 121.184 1.00 57.58 O
ATOM 13 C1' G B 77 37.846 64.128 121.581 1.00 56.10 C
ATOM 14 N9 G B 77 37.236 63.379 120.488 1.00 53.42 N
ATOM 15 C8 G B 77 35.897 63.177 120.254 1.00 52.07 C
ATOM 16 N7 G B 77 35.668 62.438 119.204 1.00 51.96 N
ATOM 17 C5 G B 77 36.932 62.131 118.714 1.00 50.69 C
ATOM 18 C6 G B 77 37.319 61.348 117.596 1.00 49.86 C
ATOM 19 O6 G B 77 36.600 60.734 116.796 1.00 49.55 O
ATOM 20 N1 G B 77 38.701 61.312 117.452 1.00 49.72 N
ATOM 21 C2 G B 77 39.598 61.942 118.273 1.00 50.11 C
ATOM 22 N2 G B 77 40.896 61.784 117.954 1.00 49.96 N
ATOM 23 N3 G B 77 39.252 62.670 119.325 1.00 49.70 N
ATOM 24 C4 G B 77 37.911 62.717 119.485 1.00 51.35 C
ATOM 25 P U B 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 26 OP1 U B 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 27 OP2 U B 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 28 O5' U B 78 40.792 67.884 123.408 1.00 56.05 O
TER

Atoms:
C4: (43.160,63.679,120.803)
N3: (44.400,64.008,121.310)
OP1: (38.359,68.490,123.420)
OP2: (39.514,67.538,121.332)
C2: (44.667,64.682,122.476)
C1': (43.768,65.761,124.478)
C3': (43.462,68.083,124.224)
O5': (40.792,67.884,123.408)
O4': (42.507,66.099,125.023)
C5': (41.001,67.977,124.823)
P: (39.357,67.565,122.805)
C4': (42.400,67.537,125.157)
C2': (44.574,67.056,124.365)
O2': (45.326,67.213,125.550)
N1: (43.549,65.065,123.200)
O4: (43.091,63.009,119.767)
O2: (45.809,64.921,122.841)
C6: (42.275,64.785,122.736)
C5: (42.049,64.121,121.599)
O3': (43.849,69.384,124.628)
OP1: (37.813,62.651,127.535)
OP2: (38.109,60.333,126.431)
C3': (37.756,65.558,123.432)
C1': (37.846,64.128,121.581)
C5': (36.798,63.605,124.844)
O6: (36.600,60.734,116.796)
O4': (37.932,63.294,122.719)
C8: (35.897,63.177,120.254)
C2: (39.598,61.942,118.273)
C6: (37.319,61.348,117.596)
C5: (36.932,62.131,118.714)
C4: (37.911,62.717,119.485)
P: (38.076,61.824,126.321)
C4': (37.881,64.117,123.922)
C2': (37.107,65.372,122.065)
O2': (37.315,66.450,121.184)
N1: (38.701,61.312,117.452)
N2: (40.896,61.784,117.954)
N3: (39.252,62.670,119.325)
N7: (35.668,62.438,119.204)
N9: (37.236,63.379,120.488)
O5': (37.045,62.222,125.171)
O3': (39.092,66.061,123.304)
Image (generated by PyMOL):
PyMOL image
show in jmol