Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A453:A452
Extra
PDB:
ATOM 1 O3' G A 452 56.524 143.552 51.897 1.00 43.34 O
ATOM 2 P U A 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 3 OP1 U A 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 4 OP2 U A 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 5 O5' U A 453 56.780 145.777 52.912 1.00 42.15 O
ATOM 6 C5' U A 453 56.073 146.608 51.989 1.00 39.18 C
ATOM 7 C4' U A 453 54.817 147.152 52.632 1.00 39.38 C
ATOM 8 O4' U A 453 53.799 146.134 52.708 1.00 36.75 O
ATOM 9 C3' U A 453 54.935 147.678 54.054 1.00 38.72 C
ATOM 10 O3' U A 453 55.464 148.995 54.068 1.00 39.02 O
ATOM 11 C2' U A 453 53.491 147.625 54.529 1.00 36.22 C
ATOM 12 O2' U A 453 52.699 148.656 53.969 1.00 34.89 O
ATOM 13 C1' U A 453 53.039 146.314 53.893 1.00 36.08 C
ATOM 14 N1 U A 453 53.256 145.130 54.731 1.00 35.71 N
ATOM 15 C2 U A 453 52.527 144.979 55.902 1.00 36.38 C
ATOM 16 O2 U A 453 51.735 145.814 56.316 1.00 37.96 O
ATOM 17 N3 U A 453 52.774 143.807 56.578 1.00 36.01 N
ATOM 18 C4 U A 453 53.663 142.809 56.218 1.00 36.20 C
ATOM 19 O4 U A 453 53.846 141.850 56.970 1.00 33.93 O
ATOM 20 C5 U A 453 54.376 143.060 55.014 1.00 36.72 C
ATOM 21 C6 U A 453 54.161 144.178 54.336 1.00 36.77 C
ATOM 22 P A A 454 56.669 149.346 55.060 1.00 38.53 P
ATOM 23 OP1 A A 454 57.003 150.742 54.765 1.00 38.80 O
ATOM 24 OP2 A A 454 57.729 148.299 54.978 1.00 37.45 O
ATOM 25 O5' A A 454 55.993 149.309 56.502 1.00 37.28 O
TER
ATOM 1 O3' A B 451 52.480 142.221 49.880 1.00 40.15 O
ATOM 2 P G B 452 52.930 141.905 48.389 1.00 41.60 P
ATOM 3 OP1 G B 452 53.258 143.226 47.817 1.00 39.44 O
ATOM 4 OP2 G B 452 51.928 141.035 47.720 1.00 40.78 O
ATOM 5 O5' G B 452 54.261 141.065 48.604 1.00 40.06 O
ATOM 6 C5' G B 452 55.476 141.720 48.935 1.00 41.42 C
ATOM 7 C4' G B 452 55.476 142.093 50.387 1.00 42.75 C
ATOM 8 O4' G B 452 55.244 140.918 51.219 1.00 42.04 O
ATOM 9 C3' G B 452 56.808 142.661 50.839 1.00 41.99 C
ATOM 10 O3' G B 452 56.524 143.552 51.897 1.00 43.34 O
ATOM 11 C2' G B 452 57.512 141.430 51.375 1.00 40.82 C
ATOM 12 O2' G B 452 58.522 141.764 52.290 1.00 40.36 O
ATOM 13 C1' G B 452 56.345 140.758 52.081 1.00 40.29 C
ATOM 14 N9 G B 452 56.528 139.354 52.396 1.00 37.67 N
ATOM 15 C8 G B 452 57.093 138.372 51.626 1.00 38.10 C
ATOM 16 N7 G B 452 57.142 137.216 52.230 1.00 37.71 N
ATOM 17 C5 G B 452 56.562 137.458 53.465 1.00 37.30 C
ATOM 18 C6 G B 452 56.317 136.588 54.551 1.00 38.22 C
ATOM 19 O6 G B 452 56.589 135.384 54.650 1.00 37.70 O
ATOM 20 N1 G B 452 55.679 137.250 55.604 1.00 38.33 N
ATOM 21 C2 G B 452 55.316 138.573 55.599 1.00 37.61 C
ATOM 22 N2 G B 452 54.671 139.016 56.677 1.00 38.28 N
ATOM 23 N3 G B 452 55.558 139.395 54.600 1.00 36.59 N
ATOM 24 C4 G B 452 56.174 138.773 53.573 1.00 36.86 C
ATOM 25 P U B 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 26 OP1 U B 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 27 OP2 U B 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 28 O5' U B 453 56.780 145.777 52.912 1.00 42.15 O
TER
ATOM 2 P U A 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 3 OP1 U A 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 4 OP2 U A 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 5 O5' U A 453 56.780 145.777 52.912 1.00 42.15 O
ATOM 6 C5' U A 453 56.073 146.608 51.989 1.00 39.18 C
ATOM 7 C4' U A 453 54.817 147.152 52.632 1.00 39.38 C
ATOM 8 O4' U A 453 53.799 146.134 52.708 1.00 36.75 O
ATOM 9 C3' U A 453 54.935 147.678 54.054 1.00 38.72 C
ATOM 10 O3' U A 453 55.464 148.995 54.068 1.00 39.02 O
ATOM 11 C2' U A 453 53.491 147.625 54.529 1.00 36.22 C
ATOM 12 O2' U A 453 52.699 148.656 53.969 1.00 34.89 O
ATOM 13 C1' U A 453 53.039 146.314 53.893 1.00 36.08 C
ATOM 14 N1 U A 453 53.256 145.130 54.731 1.00 35.71 N
ATOM 15 C2 U A 453 52.527 144.979 55.902 1.00 36.38 C
ATOM 16 O2 U A 453 51.735 145.814 56.316 1.00 37.96 O
ATOM 17 N3 U A 453 52.774 143.807 56.578 1.00 36.01 N
ATOM 18 C4 U A 453 53.663 142.809 56.218 1.00 36.20 C
ATOM 19 O4 U A 453 53.846 141.850 56.970 1.00 33.93 O
ATOM 20 C5 U A 453 54.376 143.060 55.014 1.00 36.72 C
ATOM 21 C6 U A 453 54.161 144.178 54.336 1.00 36.77 C
ATOM 22 P A A 454 56.669 149.346 55.060 1.00 38.53 P
ATOM 23 OP1 A A 454 57.003 150.742 54.765 1.00 38.80 O
ATOM 24 OP2 A A 454 57.729 148.299 54.978 1.00 37.45 O
ATOM 25 O5' A A 454 55.993 149.309 56.502 1.00 37.28 O
TER
ATOM 1 O3' A B 451 52.480 142.221 49.880 1.00 40.15 O
ATOM 2 P G B 452 52.930 141.905 48.389 1.00 41.60 P
ATOM 3 OP1 G B 452 53.258 143.226 47.817 1.00 39.44 O
ATOM 4 OP2 G B 452 51.928 141.035 47.720 1.00 40.78 O
ATOM 5 O5' G B 452 54.261 141.065 48.604 1.00 40.06 O
ATOM 6 C5' G B 452 55.476 141.720 48.935 1.00 41.42 C
ATOM 7 C4' G B 452 55.476 142.093 50.387 1.00 42.75 C
ATOM 8 O4' G B 452 55.244 140.918 51.219 1.00 42.04 O
ATOM 9 C3' G B 452 56.808 142.661 50.839 1.00 41.99 C
ATOM 10 O3' G B 452 56.524 143.552 51.897 1.00 43.34 O
ATOM 11 C2' G B 452 57.512 141.430 51.375 1.00 40.82 C
ATOM 12 O2' G B 452 58.522 141.764 52.290 1.00 40.36 O
ATOM 13 C1' G B 452 56.345 140.758 52.081 1.00 40.29 C
ATOM 14 N9 G B 452 56.528 139.354 52.396 1.00 37.67 N
ATOM 15 C8 G B 452 57.093 138.372 51.626 1.00 38.10 C
ATOM 16 N7 G B 452 57.142 137.216 52.230 1.00 37.71 N
ATOM 17 C5 G B 452 56.562 137.458 53.465 1.00 37.30 C
ATOM 18 C6 G B 452 56.317 136.588 54.551 1.00 38.22 C
ATOM 19 O6 G B 452 56.589 135.384 54.650 1.00 37.70 O
ATOM 20 N1 G B 452 55.679 137.250 55.604 1.00 38.33 N
ATOM 21 C2 G B 452 55.316 138.573 55.599 1.00 37.61 C
ATOM 22 N2 G B 452 54.671 139.016 56.677 1.00 38.28 N
ATOM 23 N3 G B 452 55.558 139.395 54.600 1.00 36.59 N
ATOM 24 C4 G B 452 56.174 138.773 53.573 1.00 36.86 C
ATOM 25 P U B 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 26 OP1 U B 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 27 OP2 U B 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 28 O5' U B 453 56.780 145.777 52.912 1.00 42.15 O
TER
Atoms:
C4: (53.663,142.809,56.218)
N3: (52.774,143.807,56.578)
OP1: (58.498,144.903,51.246)
OP2: (58.275,143.925,53.601)
C2: (52.527,144.979,55.902)
C1': (53.039,146.314,53.893)
C3': (54.935,147.678,54.054)
O5': (56.780,145.777,52.912)
O4': (53.799,146.134,52.708)
C5': (56.073,146.608,51.989)
P: (57.651,144.545,52.414)
C4': (54.817,147.152,52.632)
C2': (53.491,147.625,54.529)
O2': (52.699,148.656,53.969)
N1: (53.256,145.130,54.731)
O4: (53.846,141.850,56.970)
O2: (51.735,145.814,56.316)
C6: (54.161,144.178,54.336)
C5: (54.376,143.060,55.014)
O3': (55.464,148.995,54.068)
N3: (52.774,143.807,56.578)
OP1: (58.498,144.903,51.246)
OP2: (58.275,143.925,53.601)
C2: (52.527,144.979,55.902)
C1': (53.039,146.314,53.893)
C3': (54.935,147.678,54.054)
O5': (56.780,145.777,52.912)
O4': (53.799,146.134,52.708)
C5': (56.073,146.608,51.989)
P: (57.651,144.545,52.414)
C4': (54.817,147.152,52.632)
C2': (53.491,147.625,54.529)
O2': (52.699,148.656,53.969)
N1: (53.256,145.130,54.731)
O4: (53.846,141.850,56.970)
O2: (51.735,145.814,56.316)
C6: (54.161,144.178,54.336)
C5: (54.376,143.060,55.014)
O3': (55.464,148.995,54.068)
OP1: (53.258,143.226,47.817)
OP2: (51.928,141.035,47.720)
C3': (56.808,142.661,50.839)
C1': (56.345,140.758,52.081)
C5': (55.476,141.720,48.935)
O6: (56.589,135.384,54.650)
O4': (55.244,140.918,51.219)
C8: (57.093,138.372,51.626)
C2: (55.316,138.573,55.599)
C6: (56.317,136.588,54.551)
C5: (56.562,137.458,53.465)
C4: (56.174,138.773,53.573)
P: (52.930,141.905,48.389)
C4': (55.476,142.093,50.387)
C2': (57.512,141.430,51.375)
O2': (58.522,141.764,52.290)
N1: (55.679,137.250,55.604)
N2: (54.671,139.016,56.677)
N3: (55.558,139.395,54.600)
N7: (57.142,137.216,52.230)
N9: (56.528,139.354,52.396)
O5': (54.261,141.065,48.604)
O3': (56.524,143.552,51.897)
OP2: (51.928,141.035,47.720)
C3': (56.808,142.661,50.839)
C1': (56.345,140.758,52.081)
C5': (55.476,141.720,48.935)
O6: (56.589,135.384,54.650)
O4': (55.244,140.918,51.219)
C8: (57.093,138.372,51.626)
C2: (55.316,138.573,55.599)
C6: (56.317,136.588,54.551)
C5: (56.562,137.458,53.465)
C4: (56.174,138.773,53.573)
P: (52.930,141.905,48.389)
C4': (55.476,142.093,50.387)
C2': (57.512,141.430,51.375)
O2': (58.522,141.764,52.290)
N1: (55.679,137.250,55.604)
N2: (54.671,139.016,56.677)
N3: (55.558,139.395,54.600)
N7: (57.142,137.216,52.230)
N9: (56.528,139.354,52.396)
O5': (54.261,141.065,48.604)
O3': (56.524,143.552,51.897)
Image (generated by PyMOL):