Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDS:E2:E1
Extra
PDB:
ATOM 1 O3' C A 1 -1.333 -20.198 54.421 1.00 30.61 O
ATOM 2 P U A 2 0.081 -20.339 55.158 1.00 33.10 P
ATOM 3 OP1 U A 2 0.599 -21.708 54.885 1.00 34.97 O
ATOM 4 OP2 U A 2 -0.105 -19.890 56.559 1.00 34.46 O
ATOM 5 O5' U A 2 1.019 -19.288 54.414 1.00 29.95 O
ATOM 6 C5' U A 2 1.272 -19.402 53.017 1.00 30.60 C
ATOM 7 C4' U A 2 1.916 -18.141 52.493 1.00 27.56 C
ATOM 8 O4' U A 2 1.015 -17.020 52.693 1.00 27.61 O
ATOM 9 C3' U A 2 3.184 -17.698 53.203 1.00 28.38 C
ATOM 10 O3' U A 2 4.319 -18.410 52.733 1.00 28.34 O
ATOM 11 C2' U A 2 3.250 -16.221 52.840 1.00 28.74 C
ATOM 12 O2' U A 2 3.743 -15.984 51.536 1.00 28.63 O
ATOM 13 C1' U A 2 1.771 -15.838 52.895 1.00 26.45 C
ATOM 14 N1 U A 2 1.379 -15.236 54.177 1.00 24.64 N
ATOM 15 C2 U A 2 1.652 -13.897 54.339 1.00 23.77 C
ATOM 16 O2 U A 2 2.226 -13.237 53.488 1.00 24.70 O
ATOM 17 N3 U A 2 1.234 -13.357 55.530 1.00 21.82 N
ATOM 18 C4 U A 2 0.594 -14.007 56.557 1.00 24.03 C
ATOM 19 O4 U A 2 0.270 -13.368 57.562 1.00 23.62 O
ATOM 20 C5 U A 2 0.361 -15.406 56.327 1.00 24.46 C
ATOM 21 C6 U A 2 0.755 -15.959 55.169 1.00 22.87 C
ATOM 22 P G A 3 5.395 -18.965 53.789 1.00 29.52 P
ATOM 23 OP1 G A 3 6.460 -19.658 53.014 1.00 33.86 O
ATOM 24 OP2 G A 3 4.647 -19.705 54.834 1.00 28.68 O
ATOM 25 O5' G A 3 6.024 -17.650 54.438 1.00 25.48 O
TER
ATOM 1 P C B 1 -4.585 -19.163 58.329 1.00 32.50 P
ATOM 2 OP1 C B 1 -4.316 -20.554 58.770 1.00 36.05 O
ATOM 3 OP2 C B 1 -4.161 -18.032 59.187 1.00 32.98 O
ATOM 4 O5' C B 1 -3.952 -18.938 56.886 1.00 33.23 O
ATOM 5 C5' C B 1 -4.231 -19.833 55.815 1.00 31.47 C
ATOM 6 C4' C B 1 -3.597 -19.328 54.540 1.00 32.37 C
ATOM 7 O4' C B 1 -4.184 -18.048 54.190 1.00 30.44 O
ATOM 8 C3' C B 1 -2.108 -19.029 54.622 1.00 29.93 C
ATOM 9 O3' C B 1 -1.333 -20.198 54.421 1.00 30.61 O
ATOM 10 C2' C B 1 -1.922 -18.046 53.479 1.00 28.94 C
ATOM 11 O2' C B 1 -1.897 -18.675 52.214 1.00 32.13 O
ATOM 12 C1' C B 1 -3.201 -17.221 53.596 1.00 28.73 C
ATOM 13 N1 C B 1 -3.045 -16.011 54.422 1.00 29.02 N
ATOM 14 C2 C B 1 -2.369 -14.921 53.875 1.00 28.81 C
ATOM 15 O2 C B 1 -1.866 -15.037 52.742 1.00 26.99 O
ATOM 16 N3 C B 1 -2.277 -13.772 54.586 1.00 26.22 N
ATOM 17 C4 C B 1 -2.818 -13.696 55.803 1.00 25.58 C
ATOM 18 N4 C B 1 -2.719 -12.533 56.459 1.00 25.11 N
ATOM 19 C5 C B 1 -3.488 -14.806 56.403 1.00 24.57 C
ATOM 20 C6 C B 1 -3.573 -15.937 55.682 1.00 28.50 C
ATOM 21 P U B 2 0.081 -20.339 55.158 1.00 33.10 P
ATOM 22 OP1 U B 2 0.599 -21.708 54.885 1.00 34.97 O
ATOM 23 OP2 U B 2 -0.105 -19.890 56.559 1.00 34.46 O
ATOM 24 O5' U B 2 1.019 -19.288 54.414 1.00 29.95 O
TER
ATOM 2 P U A 2 0.081 -20.339 55.158 1.00 33.10 P
ATOM 3 OP1 U A 2 0.599 -21.708 54.885 1.00 34.97 O
ATOM 4 OP2 U A 2 -0.105 -19.890 56.559 1.00 34.46 O
ATOM 5 O5' U A 2 1.019 -19.288 54.414 1.00 29.95 O
ATOM 6 C5' U A 2 1.272 -19.402 53.017 1.00 30.60 C
ATOM 7 C4' U A 2 1.916 -18.141 52.493 1.00 27.56 C
ATOM 8 O4' U A 2 1.015 -17.020 52.693 1.00 27.61 O
ATOM 9 C3' U A 2 3.184 -17.698 53.203 1.00 28.38 C
ATOM 10 O3' U A 2 4.319 -18.410 52.733 1.00 28.34 O
ATOM 11 C2' U A 2 3.250 -16.221 52.840 1.00 28.74 C
ATOM 12 O2' U A 2 3.743 -15.984 51.536 1.00 28.63 O
ATOM 13 C1' U A 2 1.771 -15.838 52.895 1.00 26.45 C
ATOM 14 N1 U A 2 1.379 -15.236 54.177 1.00 24.64 N
ATOM 15 C2 U A 2 1.652 -13.897 54.339 1.00 23.77 C
ATOM 16 O2 U A 2 2.226 -13.237 53.488 1.00 24.70 O
ATOM 17 N3 U A 2 1.234 -13.357 55.530 1.00 21.82 N
ATOM 18 C4 U A 2 0.594 -14.007 56.557 1.00 24.03 C
ATOM 19 O4 U A 2 0.270 -13.368 57.562 1.00 23.62 O
ATOM 20 C5 U A 2 0.361 -15.406 56.327 1.00 24.46 C
ATOM 21 C6 U A 2 0.755 -15.959 55.169 1.00 22.87 C
ATOM 22 P G A 3 5.395 -18.965 53.789 1.00 29.52 P
ATOM 23 OP1 G A 3 6.460 -19.658 53.014 1.00 33.86 O
ATOM 24 OP2 G A 3 4.647 -19.705 54.834 1.00 28.68 O
ATOM 25 O5' G A 3 6.024 -17.650 54.438 1.00 25.48 O
TER
ATOM 1 P C B 1 -4.585 -19.163 58.329 1.00 32.50 P
ATOM 2 OP1 C B 1 -4.316 -20.554 58.770 1.00 36.05 O
ATOM 3 OP2 C B 1 -4.161 -18.032 59.187 1.00 32.98 O
ATOM 4 O5' C B 1 -3.952 -18.938 56.886 1.00 33.23 O
ATOM 5 C5' C B 1 -4.231 -19.833 55.815 1.00 31.47 C
ATOM 6 C4' C B 1 -3.597 -19.328 54.540 1.00 32.37 C
ATOM 7 O4' C B 1 -4.184 -18.048 54.190 1.00 30.44 O
ATOM 8 C3' C B 1 -2.108 -19.029 54.622 1.00 29.93 C
ATOM 9 O3' C B 1 -1.333 -20.198 54.421 1.00 30.61 O
ATOM 10 C2' C B 1 -1.922 -18.046 53.479 1.00 28.94 C
ATOM 11 O2' C B 1 -1.897 -18.675 52.214 1.00 32.13 O
ATOM 12 C1' C B 1 -3.201 -17.221 53.596 1.00 28.73 C
ATOM 13 N1 C B 1 -3.045 -16.011 54.422 1.00 29.02 N
ATOM 14 C2 C B 1 -2.369 -14.921 53.875 1.00 28.81 C
ATOM 15 O2 C B 1 -1.866 -15.037 52.742 1.00 26.99 O
ATOM 16 N3 C B 1 -2.277 -13.772 54.586 1.00 26.22 N
ATOM 17 C4 C B 1 -2.818 -13.696 55.803 1.00 25.58 C
ATOM 18 N4 C B 1 -2.719 -12.533 56.459 1.00 25.11 N
ATOM 19 C5 C B 1 -3.488 -14.806 56.403 1.00 24.57 C
ATOM 20 C6 C B 1 -3.573 -15.937 55.682 1.00 28.50 C
ATOM 21 P U B 2 0.081 -20.339 55.158 1.00 33.10 P
ATOM 22 OP1 U B 2 0.599 -21.708 54.885 1.00 34.97 O
ATOM 23 OP2 U B 2 -0.105 -19.890 56.559 1.00 34.46 O
ATOM 24 O5' U B 2 1.019 -19.288 54.414 1.00 29.95 O
TER
Atoms:
C4: (0.594,-14.007,56.557)
N3: (1.234,-13.357,55.530)
OP1: (0.599,-21.708,54.885)
OP2: (-0.105,-19.890,56.559)
C2: (1.652,-13.897,54.339)
C1': (1.771,-15.838,52.895)
C3': (3.184,-17.698,53.203)
O5': (1.019,-19.288,54.414)
O4': (1.015,-17.020,52.693)
C5': (1.272,-19.402,53.017)
P: (0.081,-20.339,55.158)
C4': (1.916,-18.141,52.493)
C2': (3.250,-16.221,52.840)
O2': (3.743,-15.984,51.536)
N1: (1.379,-15.236,54.177)
O4: (0.270,-13.368,57.562)
O2: (2.226,-13.237,53.488)
C6: (0.755,-15.959,55.169)
C5: (0.361,-15.406,56.327)
O3': (4.319,-18.410,52.733)
N3: (1.234,-13.357,55.530)
OP1: (0.599,-21.708,54.885)
OP2: (-0.105,-19.890,56.559)
C2: (1.652,-13.897,54.339)
C1': (1.771,-15.838,52.895)
C3': (3.184,-17.698,53.203)
O5': (1.019,-19.288,54.414)
O4': (1.015,-17.020,52.693)
C5': (1.272,-19.402,53.017)
P: (0.081,-20.339,55.158)
C4': (1.916,-18.141,52.493)
C2': (3.250,-16.221,52.840)
O2': (3.743,-15.984,51.536)
N1: (1.379,-15.236,54.177)
O4: (0.270,-13.368,57.562)
O2: (2.226,-13.237,53.488)
C6: (0.755,-15.959,55.169)
C5: (0.361,-15.406,56.327)
O3': (4.319,-18.410,52.733)
C2: (-2.369,-14.921,53.875)
OP1: (-4.316,-20.554,58.770)
OP2: (-4.161,-18.032,59.187)
C4: (-2.818,-13.696,55.803)
O5': (-3.952,-18.938,56.886)
C3': (-2.108,-19.029,54.622)
C1': (-3.201,-17.221,53.596)
O4': (-4.184,-18.048,54.190)
C5': (-4.231,-19.833,55.815)
P: (-4.585,-19.163,58.329)
O2: (-1.866,-15.037,52.742)
C4': (-3.597,-19.328,54.540)
C2': (-1.922,-18.046,53.479)
O2': (-1.897,-18.675,52.214)
N1: (-3.045,-16.011,54.422)
N3: (-2.277,-13.772,54.586)
N4: (-2.719,-12.533,56.459)
C6: (-3.573,-15.937,55.682)
C5: (-3.488,-14.806,56.403)
O3': (-1.333,-20.198,54.421)
OP1: (-4.316,-20.554,58.770)
OP2: (-4.161,-18.032,59.187)
C4: (-2.818,-13.696,55.803)
O5': (-3.952,-18.938,56.886)
C3': (-2.108,-19.029,54.622)
C1': (-3.201,-17.221,53.596)
O4': (-4.184,-18.048,54.190)
C5': (-4.231,-19.833,55.815)
P: (-4.585,-19.163,58.329)
O2: (-1.866,-15.037,52.742)
C4': (-3.597,-19.328,54.540)
C2': (-1.922,-18.046,53.479)
O2': (-1.897,-18.675,52.214)
N1: (-3.045,-16.011,54.422)
N3: (-2.277,-13.772,54.586)
N4: (-2.719,-12.533,56.459)
C6: (-3.573,-15.937,55.682)
C5: (-3.488,-14.806,56.403)
O3': (-1.333,-20.198,54.421)
Image (generated by PyMOL):