ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1859:11943

Extra

PDB:
ATOM 1 O3' A A 858 10.384 3.513 92.788 1.00 36.14 O
ATOM 2 P A A 859 10.341 4.210 91.360 1.00 38.12 P
ATOM 3 OP1 A A 859 9.547 5.474 91.523 1.00 38.38 O
ATOM 4 OP2 A A 859 9.890 3.257 90.421 1.00 37.95 O
ATOM 5 O5' A A 859 11.853 4.570 91.064 1.00 37.91 O
ATOM 6 C5' A A 859 12.171 5.374 89.938 1.00 37.80 C
ATOM 7 C4' A A 859 13.635 5.645 89.838 1.00 37.64 C
ATOM 8 O4' A A 859 14.044 6.517 90.890 1.00 37.83 O
ATOM 9 C3' A A 859 14.513 4.439 90.014 1.00 37.43 C
ATOM 10 O3' A A 859 14.601 3.713 88.834 1.00 37.19 O
ATOM 11 C2' A A 859 15.822 5.040 90.416 1.00 37.40 C
ATOM 12 O2' A A 859 16.436 5.607 89.288 1.00 37.24 O
ATOM 13 C1' A A 859 15.357 6.177 91.298 1.00 37.71 C
ATOM 14 N9 A A 859 15.352 5.810 92.722 1.00 37.88 N
ATOM 15 C8 A A 859 15.215 6.702 93.723 1.00 38.16 C
ATOM 16 N7 A A 859 15.220 6.158 94.909 1.00 38.30 N
ATOM 17 C5 A A 859 15.403 4.824 94.667 1.00 38.09 C
ATOM 18 C6 A A 859 15.505 3.755 95.536 1.00 38.12 C
ATOM 19 N6 A A 859 15.417 3.881 96.861 1.00 38.38 N
ATOM 20 N1 A A 859 15.684 2.549 94.998 1.00 37.89 N
ATOM 21 C2 A A 859 15.742 2.446 93.687 1.00 37.66 C
ATOM 22 N3 A A 859 15.654 3.376 92.762 1.00 37.61 N
ATOM 23 C4 A A 859 15.484 4.576 93.319 1.00 37.83 C
ATOM 24 P G A 860 14.303 2.171 88.818 1.00 35.63 P
ATOM 25 OP1 G A 860 14.249 1.829 87.430 1.00 35.43 O
ATOM 26 OP2 G A 860 13.148 1.941 89.648 1.00 35.86 O
ATOM 27 O5' G A 860 15.563 1.538 89.509 1.00 35.53 O
TER

ATOM 1 O3' U B1942 11.757 13.712 98.562 1.00 38.11 O
ATOM 2 P C B1943 12.910 14.522 97.835 1.00 43.83 P
ATOM 3 OP1 C B1943 13.900 14.835 98.880 1.00 43.97 O
ATOM 4 OP2 C B1943 12.255 15.650 97.072 1.00 43.96 O
ATOM 5 O5' C B1943 13.482 13.433 96.831 1.00 43.40 O
ATOM 6 C5' C B1943 13.633 12.105 97.254 1.00 43.25 C
ATOM 7 C4' C B1943 13.939 11.194 96.109 1.00 42.87 C
ATOM 8 O4' C B1943 12.723 10.814 95.475 1.00 42.84 O
ATOM 9 C3' C B1943 14.804 11.750 94.987 1.00 42.65 C
ATOM 10 O3' C B1943 16.187 11.643 95.282 1.00 42.54 O
ATOM 11 C2' C B1943 14.409 10.882 93.817 1.00 42.37 C
ATOM 12 O2' C B1943 15.143 9.666 93.857 1.00 42.13 O
ATOM 13 C1' C B1943 12.940 10.566 94.119 1.00 42.55 C
ATOM 14 N1 C B1943 12.001 11.392 93.343 1.00 42.66 N
ATOM 15 C2 C B1943 11.622 11.004 92.073 1.00 42.45 C
ATOM 16 O2 C B1943 12.114 9.951 91.597 1.00 42.17 O
ATOM 17 N3 C B1943 10.741 11.796 91.391 1.00 42.58 N
ATOM 18 C4 C B1943 10.248 12.911 91.937 1.00 42.90 C
ATOM 19 N4 C B1943 9.405 13.656 91.240 1.00 43.03 N
ATOM 20 C5 C B1943 10.617 13.301 93.241 1.00 43.12 C
ATOM 21 C6 C B1943 11.488 12.518 93.888 1.00 42.98 C
ATOM 22 P U B1944 17.275 12.499 94.491 1.00 39.05 P
ATOM 23 OP1 U B1944 18.466 12.518 95.298 1.00 39.08 O
ATOM 24 OP2 U B1944 16.676 13.741 94.113 1.00 39.24 O
ATOM 25 O5' U B1944 17.538 11.646 93.215 1.00 38.68 O
TER

Atoms:
OP1: (9.547,5.474,91.523)
OP2: (9.890,3.257,90.421)
C3': (14.513,4.439,90.014)
C1': (15.357,6.177,91.298)
C5': (12.171,5.374,89.938)
O4': (14.044,6.517,90.890)
C8: (15.215,6.702,93.723)
O2': (16.436,5.607,89.288)
C6: (15.505,3.755,95.536)
C5: (15.403,4.824,94.667)
C4: (15.484,4.576,93.319)
P: (10.341,4.210,91.360)
C4': (13.635,5.645,89.838)
C2': (15.822,5.040,90.416)
C2: (15.742,2.446,93.687)
N1: (15.684,2.549,94.998)
N3: (15.654,3.376,92.762)
N6: (15.417,3.881,96.861)
N7: (15.220,6.158,94.909)
N9: (15.352,5.810,92.722)
O5': (11.853,4.570,91.064)
O3': (14.601,3.713,88.834)
C2: (11.622,11.004,92.073)
OP1: (13.900,14.835,98.880)
OP2: (12.255,15.650,97.072)
C4: (10.248,12.911,91.937)
O5': (13.482,13.433,96.831)
C3': (14.804,11.750,94.987)
C1': (12.940,10.566,94.119)
O4': (12.723,10.814,95.475)
C5': (13.633,12.105,97.254)
P: (12.910,14.522,97.835)
O2: (12.114,9.951,91.597)
C4': (13.939,11.194,96.109)
C2': (14.409,10.882,93.817)
O2': (15.143,9.666,93.857)
N1: (12.001,11.392,93.343)
N3: (10.741,11.796,91.391)
N4: (9.405,13.656,91.240)
C6: (11.488,12.518,93.888)
C5: (10.617,13.301,93.241)
O3': (16.187,11.643,95.282)
Image (generated by PyMOL):
PyMOL image
show in jmol