Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNO:B5:B4
Extra
PDB:
ATOM 1 O3' C A 4 9.231 1.571 -9.867 1.00 43.69 O
ATOM 2 P A A 5 7.928 1.272 -8.999 1.00 49.48 P
ATOM 3 OP1 A A 5 6.743 1.798 -9.751 1.00 53.20 O
ATOM 4 OP2 A A 5 8.232 1.802 -7.650 1.00 47.70 O
ATOM 5 O5' A A 5 7.834 -0.314 -8.981 1.00 42.36 O
ATOM 6 C5' A A 5 7.309 -1.031 -10.093 1.00 46.26 C
ATOM 7 C4' A A 5 7.988 -2.385 -10.224 1.00 46.78 C
ATOM 8 O4' A A 5 9.380 -2.223 -10.604 1.00 47.10 O
ATOM 9 C3' A A 5 8.054 -3.232 -8.966 1.00 50.11 C
ATOM 10 O3' A A 5 6.867 -3.980 -8.824 1.00 52.37 O
ATOM 11 C2' A A 5 9.196 -4.173 -9.285 1.00 45.24 C
ATOM 12 O2' A A 5 8.734 -5.162 -10.181 1.00 50.07 O
ATOM 13 C1' A A 5 10.166 -3.223 -9.981 1.00 43.78 C
ATOM 14 N9 A A 5 11.103 -2.546 -9.087 1.00 44.62 N
ATOM 15 C8 A A 5 11.296 -1.193 -8.968 1.00 45.30 C
ATOM 16 N7 A A 5 12.227 -0.864 -8.097 1.00 46.63 N
ATOM 17 C5 A A 5 12.669 -2.085 -7.609 1.00 42.00 C
ATOM 18 C6 A A 5 13.638 -2.417 -6.664 1.00 40.51 C
ATOM 19 N6 A A 5 14.354 -1.522 -6.001 1.00 42.04 N
ATOM 20 N1 A A 5 13.851 -3.716 -6.413 1.00 43.63 N
ATOM 21 C2 A A 5 13.113 -4.622 -7.060 1.00 48.24 C
ATOM 22 N3 A A 5 12.155 -4.437 -7.961 1.00 50.72 N
ATOM 23 C4 A A 5 11.984 -3.128 -8.202 1.00 44.39 C
ATOM 24 P C A 6 6.134 -3.997 -7.411 1.00 56.42 P
ATOM 25 OP1 C A 6 4.834 -4.690 -7.583 1.00 49.75 O
ATOM 26 OP2 C A 6 6.182 -2.608 -6.895 1.00 56.46 O
ATOM 27 O5' C A 6 7.105 -4.857 -6.481 1.00 55.92 O
TER
ATOM 1 O3' U B 3 8.095 5.872 -14.126 1.00 51.51 O
ATOM 2 P C B 4 7.228 5.181 -12.971 1.00 52.88 P
ATOM 3 OP1 C B 4 6.453 4.134 -13.685 1.00 51.21 O
ATOM 4 OP2 C B 4 6.519 6.219 -12.164 1.00 50.07 O
ATOM 5 O5' C B 4 8.307 4.504 -12.005 1.00 54.08 O
ATOM 6 C5' C B 4 9.150 3.442 -12.453 1.00 45.82 C
ATOM 7 C4' C B 4 10.200 3.134 -11.402 1.00 45.75 C
ATOM 8 O4' C B 4 11.081 4.274 -11.214 1.00 46.21 O
ATOM 9 C3' C B 4 9.665 2.898 -10.008 1.00 45.65 C
ATOM 10 O3' C B 4 9.231 1.571 -9.867 1.00 43.69 O
ATOM 11 C2' C B 4 10.897 3.123 -9.158 1.00 51.59 C
ATOM 12 O2' C B 4 11.756 1.995 -9.194 1.00 53.12 O
ATOM 13 C1' C B 4 11.537 4.310 -9.872 1.00 47.44 C
ATOM 14 N1 C B 4 11.189 5.618 -9.303 1.00 48.24 N
ATOM 15 C2 C B 4 12.045 6.199 -8.361 1.00 46.79 C
ATOM 16 O2 C B 4 13.030 5.564 -7.974 1.00 44.12 O
ATOM 17 N3 C B 4 11.772 7.432 -7.893 1.00 46.58 N
ATOM 18 C4 C B 4 10.678 8.074 -8.312 1.00 43.97 C
ATOM 19 N4 C B 4 10.456 9.298 -7.836 1.00 43.17 N
ATOM 20 C5 C B 4 9.769 7.492 -9.238 1.00 44.45 C
ATOM 21 C6 C B 4 10.059 6.274 -9.706 1.00 48.44 C
ATOM 22 P A B 5 7.928 1.272 -8.999 1.00 49.48 P
ATOM 23 OP1 A B 5 6.743 1.798 -9.751 1.00 53.20 O
ATOM 24 OP2 A B 5 8.232 1.802 -7.650 1.00 47.70 O
ATOM 25 O5' A B 5 7.834 -0.314 -8.981 1.00 42.36 O
TER
ATOM 2 P A A 5 7.928 1.272 -8.999 1.00 49.48 P
ATOM 3 OP1 A A 5 6.743 1.798 -9.751 1.00 53.20 O
ATOM 4 OP2 A A 5 8.232 1.802 -7.650 1.00 47.70 O
ATOM 5 O5' A A 5 7.834 -0.314 -8.981 1.00 42.36 O
ATOM 6 C5' A A 5 7.309 -1.031 -10.093 1.00 46.26 C
ATOM 7 C4' A A 5 7.988 -2.385 -10.224 1.00 46.78 C
ATOM 8 O4' A A 5 9.380 -2.223 -10.604 1.00 47.10 O
ATOM 9 C3' A A 5 8.054 -3.232 -8.966 1.00 50.11 C
ATOM 10 O3' A A 5 6.867 -3.980 -8.824 1.00 52.37 O
ATOM 11 C2' A A 5 9.196 -4.173 -9.285 1.00 45.24 C
ATOM 12 O2' A A 5 8.734 -5.162 -10.181 1.00 50.07 O
ATOM 13 C1' A A 5 10.166 -3.223 -9.981 1.00 43.78 C
ATOM 14 N9 A A 5 11.103 -2.546 -9.087 1.00 44.62 N
ATOM 15 C8 A A 5 11.296 -1.193 -8.968 1.00 45.30 C
ATOM 16 N7 A A 5 12.227 -0.864 -8.097 1.00 46.63 N
ATOM 17 C5 A A 5 12.669 -2.085 -7.609 1.00 42.00 C
ATOM 18 C6 A A 5 13.638 -2.417 -6.664 1.00 40.51 C
ATOM 19 N6 A A 5 14.354 -1.522 -6.001 1.00 42.04 N
ATOM 20 N1 A A 5 13.851 -3.716 -6.413 1.00 43.63 N
ATOM 21 C2 A A 5 13.113 -4.622 -7.060 1.00 48.24 C
ATOM 22 N3 A A 5 12.155 -4.437 -7.961 1.00 50.72 N
ATOM 23 C4 A A 5 11.984 -3.128 -8.202 1.00 44.39 C
ATOM 24 P C A 6 6.134 -3.997 -7.411 1.00 56.42 P
ATOM 25 OP1 C A 6 4.834 -4.690 -7.583 1.00 49.75 O
ATOM 26 OP2 C A 6 6.182 -2.608 -6.895 1.00 56.46 O
ATOM 27 O5' C A 6 7.105 -4.857 -6.481 1.00 55.92 O
TER
ATOM 1 O3' U B 3 8.095 5.872 -14.126 1.00 51.51 O
ATOM 2 P C B 4 7.228 5.181 -12.971 1.00 52.88 P
ATOM 3 OP1 C B 4 6.453 4.134 -13.685 1.00 51.21 O
ATOM 4 OP2 C B 4 6.519 6.219 -12.164 1.00 50.07 O
ATOM 5 O5' C B 4 8.307 4.504 -12.005 1.00 54.08 O
ATOM 6 C5' C B 4 9.150 3.442 -12.453 1.00 45.82 C
ATOM 7 C4' C B 4 10.200 3.134 -11.402 1.00 45.75 C
ATOM 8 O4' C B 4 11.081 4.274 -11.214 1.00 46.21 O
ATOM 9 C3' C B 4 9.665 2.898 -10.008 1.00 45.65 C
ATOM 10 O3' C B 4 9.231 1.571 -9.867 1.00 43.69 O
ATOM 11 C2' C B 4 10.897 3.123 -9.158 1.00 51.59 C
ATOM 12 O2' C B 4 11.756 1.995 -9.194 1.00 53.12 O
ATOM 13 C1' C B 4 11.537 4.310 -9.872 1.00 47.44 C
ATOM 14 N1 C B 4 11.189 5.618 -9.303 1.00 48.24 N
ATOM 15 C2 C B 4 12.045 6.199 -8.361 1.00 46.79 C
ATOM 16 O2 C B 4 13.030 5.564 -7.974 1.00 44.12 O
ATOM 17 N3 C B 4 11.772 7.432 -7.893 1.00 46.58 N
ATOM 18 C4 C B 4 10.678 8.074 -8.312 1.00 43.97 C
ATOM 19 N4 C B 4 10.456 9.298 -7.836 1.00 43.17 N
ATOM 20 C5 C B 4 9.769 7.492 -9.238 1.00 44.45 C
ATOM 21 C6 C B 4 10.059 6.274 -9.706 1.00 48.44 C
ATOM 22 P A B 5 7.928 1.272 -8.999 1.00 49.48 P
ATOM 23 OP1 A B 5 6.743 1.798 -9.751 1.00 53.20 O
ATOM 24 OP2 A B 5 8.232 1.802 -7.650 1.00 47.70 O
ATOM 25 O5' A B 5 7.834 -0.314 -8.981 1.00 42.36 O
TER
Atoms:
OP1: (6.743,1.798,-9.751)
OP2: (8.232,1.802,-7.650)
C3': (8.054,-3.232,-8.966)
C1': (10.166,-3.223,-9.981)
C5': (7.309,-1.031,-10.093)
O4': (9.380,-2.223,-10.604)
C8: (11.296,-1.193,-8.968)
O2': (8.734,-5.162,-10.181)
C6: (13.638,-2.417,-6.664)
C5: (12.669,-2.085,-7.609)
C4: (11.984,-3.128,-8.202)
P: (7.928,1.272,-8.999)
C4': (7.988,-2.385,-10.224)
C2': (9.196,-4.173,-9.285)
C2: (13.113,-4.622,-7.060)
N1: (13.851,-3.716,-6.413)
N3: (12.155,-4.437,-7.961)
N6: (14.354,-1.522,-6.001)
N7: (12.227,-0.864,-8.097)
N9: (11.103,-2.546,-9.087)
O5': (7.834,-0.314,-8.981)
O3': (6.867,-3.980,-8.824)
OP2: (8.232,1.802,-7.650)
C3': (8.054,-3.232,-8.966)
C1': (10.166,-3.223,-9.981)
C5': (7.309,-1.031,-10.093)
O4': (9.380,-2.223,-10.604)
C8: (11.296,-1.193,-8.968)
O2': (8.734,-5.162,-10.181)
C6: (13.638,-2.417,-6.664)
C5: (12.669,-2.085,-7.609)
C4: (11.984,-3.128,-8.202)
P: (7.928,1.272,-8.999)
C4': (7.988,-2.385,-10.224)
C2': (9.196,-4.173,-9.285)
C2: (13.113,-4.622,-7.060)
N1: (13.851,-3.716,-6.413)
N3: (12.155,-4.437,-7.961)
N6: (14.354,-1.522,-6.001)
N7: (12.227,-0.864,-8.097)
N9: (11.103,-2.546,-9.087)
O5': (7.834,-0.314,-8.981)
O3': (6.867,-3.980,-8.824)
C2: (12.045,6.199,-8.361)
OP1: (6.453,4.134,-13.685)
OP2: (6.519,6.219,-12.164)
C4: (10.678,8.074,-8.312)
O5': (8.307,4.504,-12.005)
C3': (9.665,2.898,-10.008)
C1': (11.537,4.310,-9.872)
O4': (11.081,4.274,-11.214)
C5': (9.150,3.442,-12.453)
P: (7.228,5.181,-12.971)
O2: (13.030,5.564,-7.974)
C4': (10.200,3.134,-11.402)
C2': (10.897,3.123,-9.158)
O2': (11.756,1.995,-9.194)
N1: (11.189,5.618,-9.303)
N3: (11.772,7.432,-7.893)
N4: (10.456,9.298,-7.836)
C6: (10.059,6.274,-9.706)
C5: (9.769,7.492,-9.238)
O3': (9.231,1.571,-9.867)
OP1: (6.453,4.134,-13.685)
OP2: (6.519,6.219,-12.164)
C4: (10.678,8.074,-8.312)
O5': (8.307,4.504,-12.005)
C3': (9.665,2.898,-10.008)
C1': (11.537,4.310,-9.872)
O4': (11.081,4.274,-11.214)
C5': (9.150,3.442,-12.453)
P: (7.228,5.181,-12.971)
O2: (13.030,5.564,-7.974)
C4': (10.200,3.134,-11.402)
C2': (10.897,3.123,-9.158)
O2': (11.756,1.995,-9.194)
N1: (11.189,5.618,-9.303)
N3: (11.772,7.432,-7.893)
N4: (10.456,9.298,-7.836)
C6: (10.059,6.274,-9.706)
C5: (9.769,7.492,-9.238)
O3': (9.231,1.571,-9.867)
Image (generated by PyMOL):