Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GJW:I10:I9
Extra
PDB:
ATOM 1 O3' C A 9 106.668 -11.395 -31.931 1.00 53.15 O
ATOM 2 P A A 10 108.058 -12.052 -32.441 1.00 52.36 P
ATOM 3 OP1 A A 10 109.052 -12.081 -31.335 1.00 51.03 O
ATOM 4 OP2 A A 10 108.392 -11.412 -33.727 1.00 51.00 O
ATOM 5 O5' A A 10 107.595 -13.539 -32.754 1.00 51.35 O
ATOM 6 C5' A A 10 108.487 -14.562 -32.497 1.00 50.51 C
ATOM 7 C4' A A 10 107.768 -15.775 -31.927 1.00 53.29 C
ATOM 8 O4' A A 10 107.696 -15.695 -30.479 1.00 53.73 O
ATOM 9 C3' A A 10 106.342 -16.054 -32.372 1.00 53.69 C
ATOM 10 O3' A A 10 106.154 -17.460 -32.372 1.00 54.02 O
ATOM 11 C2' A A 10 105.506 -15.485 -31.225 1.00 54.24 C
ATOM 12 O2' A A 10 104.216 -16.093 -31.162 1.00 54.14 O
ATOM 13 C1' A A 10 106.375 -15.881 -30.022 1.00 54.23 C
ATOM 14 N9 A A 10 106.261 -15.027 -28.852 1.00 53.48 N
ATOM 15 C8 A A 10 106.447 -13.676 -28.869 1.00 53.96 C
ATOM 16 N7 A A 10 106.303 -13.104 -27.692 1.00 55.84 N
ATOM 17 C5 A A 10 106.005 -14.161 -26.846 1.00 54.86 C
ATOM 18 C6 A A 10 105.737 -14.195 -25.466 1.00 54.48 C
ATOM 19 N6 A A 10 105.744 -13.075 -24.732 1.00 55.80 N
ATOM 20 N1 A A 10 105.479 -15.395 -24.893 1.00 55.31 N
ATOM 21 C2 A A 10 105.484 -16.481 -25.674 1.00 55.58 C
ATOM 22 N3 A A 10 105.710 -16.570 -26.993 1.00 55.20 N
ATOM 23 C4 A A 10 105.972 -15.362 -27.537 1.00 54.22 C
ATOM 24 P u A 11 106.562 -18.444 -33.553 1.00 48.50 P
ATOM 25 OP1 u A 11 107.289 -19.545 -32.910 1.00 49.45 O
ATOM 26 OP2 u A 11 107.175 -17.652 -34.616 1.00 49.32 O
ATOM 27 O5' u A 11 105.197 -19.066 -34.090 1.00 50.30 O
TER
ATOM 1 O3' C B 8 106.403 -6.128 -28.552 1.00 53.09 O
ATOM 2 P C B 9 107.689 -6.826 -29.232 1.00 53.57 P
ATOM 3 OP1 C B 9 108.361 -7.662 -28.222 1.00 51.42 O
ATOM 4 OP2 C B 9 108.406 -5.746 -30.001 1.00 53.20 O
ATOM 5 O5' C B 9 107.015 -7.870 -30.249 1.00 54.23 O
ATOM 6 C5' C B 9 105.999 -8.801 -29.864 1.00 54.02 C
ATOM 7 C4' C B 9 105.338 -9.416 -31.096 1.00 55.20 C
ATOM 8 O4' C B 9 104.616 -8.361 -31.760 1.00 54.27 O
ATOM 9 C3' C B 9 106.241 -10.005 -32.193 1.00 54.83 C
ATOM 10 O3' C B 9 106.668 -11.395 -31.931 1.00 53.15 O
ATOM 11 C2' C B 9 105.306 -9.907 -33.388 1.00 54.44 C
ATOM 12 O2' C B 9 104.382 -10.948 -33.354 1.00 54.08 O
ATOM 13 C1' C B 9 104.529 -8.628 -33.142 1.00 54.39 C
ATOM 14 N1 C B 9 105.085 -7.473 -33.874 1.00 55.90 N
ATOM 15 C2 C B 9 104.629 -7.192 -35.171 1.00 56.18 C
ATOM 16 O2 C B 9 103.758 -7.925 -35.651 1.00 57.34 O
ATOM 17 N3 C B 9 105.155 -6.123 -35.851 1.00 55.88 N
ATOM 18 C4 C B 9 106.105 -5.367 -35.262 1.00 55.85 C
ATOM 19 N4 C B 9 106.618 -4.321 -35.916 1.00 56.42 N
ATOM 20 C5 C B 9 106.594 -5.646 -33.943 1.00 55.76 C
ATOM 21 C6 C B 9 106.060 -6.697 -33.293 1.00 56.59 C
ATOM 22 P A B 10 108.058 -12.052 -32.441 1.00 52.36 P
ATOM 23 OP1 A B 10 109.052 -12.081 -31.335 1.00 51.03 O
ATOM 24 OP2 A B 10 108.392 -11.412 -33.727 1.00 51.00 O
ATOM 25 O5' A B 10 107.595 -13.539 -32.754 1.00 51.35 O
TER
ATOM 2 P A A 10 108.058 -12.052 -32.441 1.00 52.36 P
ATOM 3 OP1 A A 10 109.052 -12.081 -31.335 1.00 51.03 O
ATOM 4 OP2 A A 10 108.392 -11.412 -33.727 1.00 51.00 O
ATOM 5 O5' A A 10 107.595 -13.539 -32.754 1.00 51.35 O
ATOM 6 C5' A A 10 108.487 -14.562 -32.497 1.00 50.51 C
ATOM 7 C4' A A 10 107.768 -15.775 -31.927 1.00 53.29 C
ATOM 8 O4' A A 10 107.696 -15.695 -30.479 1.00 53.73 O
ATOM 9 C3' A A 10 106.342 -16.054 -32.372 1.00 53.69 C
ATOM 10 O3' A A 10 106.154 -17.460 -32.372 1.00 54.02 O
ATOM 11 C2' A A 10 105.506 -15.485 -31.225 1.00 54.24 C
ATOM 12 O2' A A 10 104.216 -16.093 -31.162 1.00 54.14 O
ATOM 13 C1' A A 10 106.375 -15.881 -30.022 1.00 54.23 C
ATOM 14 N9 A A 10 106.261 -15.027 -28.852 1.00 53.48 N
ATOM 15 C8 A A 10 106.447 -13.676 -28.869 1.00 53.96 C
ATOM 16 N7 A A 10 106.303 -13.104 -27.692 1.00 55.84 N
ATOM 17 C5 A A 10 106.005 -14.161 -26.846 1.00 54.86 C
ATOM 18 C6 A A 10 105.737 -14.195 -25.466 1.00 54.48 C
ATOM 19 N6 A A 10 105.744 -13.075 -24.732 1.00 55.80 N
ATOM 20 N1 A A 10 105.479 -15.395 -24.893 1.00 55.31 N
ATOM 21 C2 A A 10 105.484 -16.481 -25.674 1.00 55.58 C
ATOM 22 N3 A A 10 105.710 -16.570 -26.993 1.00 55.20 N
ATOM 23 C4 A A 10 105.972 -15.362 -27.537 1.00 54.22 C
ATOM 24 P u A 11 106.562 -18.444 -33.553 1.00 48.50 P
ATOM 25 OP1 u A 11 107.289 -19.545 -32.910 1.00 49.45 O
ATOM 26 OP2 u A 11 107.175 -17.652 -34.616 1.00 49.32 O
ATOM 27 O5' u A 11 105.197 -19.066 -34.090 1.00 50.30 O
TER
ATOM 1 O3' C B 8 106.403 -6.128 -28.552 1.00 53.09 O
ATOM 2 P C B 9 107.689 -6.826 -29.232 1.00 53.57 P
ATOM 3 OP1 C B 9 108.361 -7.662 -28.222 1.00 51.42 O
ATOM 4 OP2 C B 9 108.406 -5.746 -30.001 1.00 53.20 O
ATOM 5 O5' C B 9 107.015 -7.870 -30.249 1.00 54.23 O
ATOM 6 C5' C B 9 105.999 -8.801 -29.864 1.00 54.02 C
ATOM 7 C4' C B 9 105.338 -9.416 -31.096 1.00 55.20 C
ATOM 8 O4' C B 9 104.616 -8.361 -31.760 1.00 54.27 O
ATOM 9 C3' C B 9 106.241 -10.005 -32.193 1.00 54.83 C
ATOM 10 O3' C B 9 106.668 -11.395 -31.931 1.00 53.15 O
ATOM 11 C2' C B 9 105.306 -9.907 -33.388 1.00 54.44 C
ATOM 12 O2' C B 9 104.382 -10.948 -33.354 1.00 54.08 O
ATOM 13 C1' C B 9 104.529 -8.628 -33.142 1.00 54.39 C
ATOM 14 N1 C B 9 105.085 -7.473 -33.874 1.00 55.90 N
ATOM 15 C2 C B 9 104.629 -7.192 -35.171 1.00 56.18 C
ATOM 16 O2 C B 9 103.758 -7.925 -35.651 1.00 57.34 O
ATOM 17 N3 C B 9 105.155 -6.123 -35.851 1.00 55.88 N
ATOM 18 C4 C B 9 106.105 -5.367 -35.262 1.00 55.85 C
ATOM 19 N4 C B 9 106.618 -4.321 -35.916 1.00 56.42 N
ATOM 20 C5 C B 9 106.594 -5.646 -33.943 1.00 55.76 C
ATOM 21 C6 C B 9 106.060 -6.697 -33.293 1.00 56.59 C
ATOM 22 P A B 10 108.058 -12.052 -32.441 1.00 52.36 P
ATOM 23 OP1 A B 10 109.052 -12.081 -31.335 1.00 51.03 O
ATOM 24 OP2 A B 10 108.392 -11.412 -33.727 1.00 51.00 O
ATOM 25 O5' A B 10 107.595 -13.539 -32.754 1.00 51.35 O
TER
Atoms:
OP1: (109.052,-12.081,-31.335)
OP2: (108.392,-11.412,-33.727)
C3': (106.342,-16.054,-32.372)
C1': (106.375,-15.881,-30.022)
C5': (108.487,-14.562,-32.497)
O4': (107.696,-15.695,-30.479)
C8: (106.447,-13.676,-28.869)
O2': (104.216,-16.093,-31.162)
C6: (105.737,-14.195,-25.466)
C5: (106.005,-14.161,-26.846)
C4: (105.972,-15.362,-27.537)
P: (108.058,-12.052,-32.441)
C4': (107.768,-15.775,-31.927)
C2': (105.506,-15.485,-31.225)
C2: (105.484,-16.481,-25.674)
N1: (105.479,-15.395,-24.893)
N3: (105.710,-16.570,-26.993)
N6: (105.744,-13.075,-24.732)
N7: (106.303,-13.104,-27.692)
N9: (106.261,-15.027,-28.852)
O5': (107.595,-13.539,-32.754)
O3': (106.154,-17.460,-32.372)
OP2: (108.392,-11.412,-33.727)
C3': (106.342,-16.054,-32.372)
C1': (106.375,-15.881,-30.022)
C5': (108.487,-14.562,-32.497)
O4': (107.696,-15.695,-30.479)
C8: (106.447,-13.676,-28.869)
O2': (104.216,-16.093,-31.162)
C6: (105.737,-14.195,-25.466)
C5: (106.005,-14.161,-26.846)
C4: (105.972,-15.362,-27.537)
P: (108.058,-12.052,-32.441)
C4': (107.768,-15.775,-31.927)
C2': (105.506,-15.485,-31.225)
C2: (105.484,-16.481,-25.674)
N1: (105.479,-15.395,-24.893)
N3: (105.710,-16.570,-26.993)
N6: (105.744,-13.075,-24.732)
N7: (106.303,-13.104,-27.692)
N9: (106.261,-15.027,-28.852)
O5': (107.595,-13.539,-32.754)
O3': (106.154,-17.460,-32.372)
C2: (104.629,-7.192,-35.171)
OP1: (108.361,-7.662,-28.222)
OP2: (108.406,-5.746,-30.001)
C4: (106.105,-5.367,-35.262)
O5': (107.015,-7.870,-30.249)
C3': (106.241,-10.005,-32.193)
C1': (104.529,-8.628,-33.142)
O4': (104.616,-8.361,-31.760)
C5': (105.999,-8.801,-29.864)
P: (107.689,-6.826,-29.232)
O2: (103.758,-7.925,-35.651)
C4': (105.338,-9.416,-31.096)
C2': (105.306,-9.907,-33.388)
O2': (104.382,-10.948,-33.354)
N1: (105.085,-7.473,-33.874)
N3: (105.155,-6.123,-35.851)
N4: (106.618,-4.321,-35.916)
C6: (106.060,-6.697,-33.293)
C5: (106.594,-5.646,-33.943)
O3': (106.668,-11.395,-31.931)
OP1: (108.361,-7.662,-28.222)
OP2: (108.406,-5.746,-30.001)
C4: (106.105,-5.367,-35.262)
O5': (107.015,-7.870,-30.249)
C3': (106.241,-10.005,-32.193)
C1': (104.529,-8.628,-33.142)
O4': (104.616,-8.361,-31.760)
C5': (105.999,-8.801,-29.864)
P: (107.689,-6.826,-29.232)
O2: (103.758,-7.925,-35.651)
C4': (105.338,-9.416,-31.096)
C2': (105.306,-9.907,-33.388)
O2': (104.382,-10.948,-33.354)
N1: (105.085,-7.473,-33.874)
N3: (105.155,-6.123,-35.851)
N4: (106.618,-4.321,-35.916)
C6: (106.060,-6.697,-33.293)
C5: (106.594,-5.646,-33.943)
O3': (106.668,-11.395,-31.931)
Image (generated by PyMOL):