Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02090:02089
Extra
PDB:
ATOM 1 O3' C A2089 118.914 117.071 29.547 1.00 67.27 O
ATOM 2 P A A2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 3 OP1 A A2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 4 OP2 A A2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 5 O5' A A2090 116.887 118.004 30.696 1.00 66.11 O
ATOM 6 C5' A A2090 115.991 117.722 29.602 1.00 63.58 C
ATOM 7 C4' A A2090 115.006 116.650 30.003 1.00 62.24 C
ATOM 8 O4' A A2090 115.737 115.448 30.364 1.00 62.79 O
ATOM 9 C3' A A2090 114.179 116.970 31.235 1.00 60.92 C
ATOM 10 O3' A A2090 113.036 117.745 30.897 1.00 60.24 O
ATOM 11 C2' A A2090 113.824 115.585 31.756 1.00 60.90 C
ATOM 12 O2' A A2090 112.794 114.964 31.016 1.00 60.76 O
ATOM 13 C1' A A2090 115.121 114.827 31.479 1.00 61.52 C
ATOM 14 N9 A A2090 116.082 114.825 32.586 1.00 61.93 N
ATOM 15 C8 A A2090 117.398 115.207 32.532 1.00 61.69 C
ATOM 16 N7 A A2090 118.042 115.046 33.660 1.00 62.60 N
ATOM 17 C5 A A2090 117.085 114.536 34.523 1.00 61.98 C
ATOM 18 C6 A A2090 117.143 114.138 35.868 1.00 61.80 C
ATOM 19 N6 A A2090 118.255 114.178 36.605 1.00 61.30 N
ATOM 20 N1 A A2090 116.007 113.685 36.438 1.00 62.05 N
ATOM 21 C2 A A2090 114.897 113.634 35.697 1.00 61.54 C
ATOM 22 N3 A A2090 114.719 113.967 34.423 1.00 63.00 N
ATOM 23 C4 A A2090 115.866 114.414 33.883 1.00 62.61 C
ATOM 24 P C A2091 112.792 119.157 31.623 1.00 58.91 P
ATOM 25 OP1 C A2091 111.459 119.646 31.198 1.00 56.70 O
ATOM 26 OP2 C A2091 113.990 120.005 31.400 1.00 59.85 O
ATOM 27 O5' C A2091 112.751 118.793 33.172 1.00 57.23 O
TER
ATOM 1 O3' U B2088 124.811 115.350 29.040 1.00 77.14 O
ATOM 2 P C B2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 3 OP1 C B2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 4 OP2 C B2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 5 O5' C B2089 122.881 116.296 27.811 1.00 76.19 O
ATOM 6 C5' C B2089 121.896 117.242 27.345 1.00 73.72 C
ATOM 7 C4' C B2089 120.517 116.814 27.803 1.00 70.96 C
ATOM 8 O4' C B2089 120.297 115.419 27.437 1.00 70.09 O
ATOM 9 C3' C B2089 120.299 116.869 29.312 1.00 69.50 C
ATOM 10 O3' C B2089 118.914 117.071 29.547 1.00 67.27 O
ATOM 11 C2' C B2089 120.677 115.460 29.745 1.00 68.74 C
ATOM 12 O2' C B2089 120.128 115.086 30.985 1.00 67.78 O
ATOM 13 C1' C B2089 120.065 114.654 28.607 1.00 70.17 C
ATOM 14 N1 C B2089 120.617 113.304 28.418 1.00 71.81 N
ATOM 15 C2 C B2089 119.765 112.195 28.574 1.00 73.03 C
ATOM 16 O2 C B2089 118.572 112.381 28.885 1.00 72.66 O
ATOM 17 N3 C B2089 120.262 110.953 28.382 1.00 73.30 N
ATOM 18 C4 C B2089 121.545 110.790 28.053 1.00 73.33 C
ATOM 19 N4 C B2089 121.989 109.546 27.868 1.00 74.60 N
ATOM 20 C5 C B2089 122.431 111.894 27.898 1.00 73.00 C
ATOM 21 C6 C B2089 121.931 113.121 28.089 1.00 72.72 C
ATOM 22 P A B2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 23 OP1 A B2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 24 OP2 A B2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 25 O5' A B2090 116.887 118.004 30.696 1.00 66.11 O
TER
ATOM 2 P A A2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 3 OP1 A A2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 4 OP2 A A2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 5 O5' A A2090 116.887 118.004 30.696 1.00 66.11 O
ATOM 6 C5' A A2090 115.991 117.722 29.602 1.00 63.58 C
ATOM 7 C4' A A2090 115.006 116.650 30.003 1.00 62.24 C
ATOM 8 O4' A A2090 115.737 115.448 30.364 1.00 62.79 O
ATOM 9 C3' A A2090 114.179 116.970 31.235 1.00 60.92 C
ATOM 10 O3' A A2090 113.036 117.745 30.897 1.00 60.24 O
ATOM 11 C2' A A2090 113.824 115.585 31.756 1.00 60.90 C
ATOM 12 O2' A A2090 112.794 114.964 31.016 1.00 60.76 O
ATOM 13 C1' A A2090 115.121 114.827 31.479 1.00 61.52 C
ATOM 14 N9 A A2090 116.082 114.825 32.586 1.00 61.93 N
ATOM 15 C8 A A2090 117.398 115.207 32.532 1.00 61.69 C
ATOM 16 N7 A A2090 118.042 115.046 33.660 1.00 62.60 N
ATOM 17 C5 A A2090 117.085 114.536 34.523 1.00 61.98 C
ATOM 18 C6 A A2090 117.143 114.138 35.868 1.00 61.80 C
ATOM 19 N6 A A2090 118.255 114.178 36.605 1.00 61.30 N
ATOM 20 N1 A A2090 116.007 113.685 36.438 1.00 62.05 N
ATOM 21 C2 A A2090 114.897 113.634 35.697 1.00 61.54 C
ATOM 22 N3 A A2090 114.719 113.967 34.423 1.00 63.00 N
ATOM 23 C4 A A2090 115.866 114.414 33.883 1.00 62.61 C
ATOM 24 P C A2091 112.792 119.157 31.623 1.00 58.91 P
ATOM 25 OP1 C A2091 111.459 119.646 31.198 1.00 56.70 O
ATOM 26 OP2 C A2091 113.990 120.005 31.400 1.00 59.85 O
ATOM 27 O5' C A2091 112.751 118.793 33.172 1.00 57.23 O
TER
ATOM 1 O3' U B2088 124.811 115.350 29.040 1.00 77.14 O
ATOM 2 P C B2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 3 OP1 C B2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 4 OP2 C B2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 5 O5' C B2089 122.881 116.296 27.811 1.00 76.19 O
ATOM 6 C5' C B2089 121.896 117.242 27.345 1.00 73.72 C
ATOM 7 C4' C B2089 120.517 116.814 27.803 1.00 70.96 C
ATOM 8 O4' C B2089 120.297 115.419 27.437 1.00 70.09 O
ATOM 9 C3' C B2089 120.299 116.869 29.312 1.00 69.50 C
ATOM 10 O3' C B2089 118.914 117.071 29.547 1.00 67.27 O
ATOM 11 C2' C B2089 120.677 115.460 29.745 1.00 68.74 C
ATOM 12 O2' C B2089 120.128 115.086 30.985 1.00 67.78 O
ATOM 13 C1' C B2089 120.065 114.654 28.607 1.00 70.17 C
ATOM 14 N1 C B2089 120.617 113.304 28.418 1.00 71.81 N
ATOM 15 C2 C B2089 119.765 112.195 28.574 1.00 73.03 C
ATOM 16 O2 C B2089 118.572 112.381 28.885 1.00 72.66 O
ATOM 17 N3 C B2089 120.262 110.953 28.382 1.00 73.30 N
ATOM 18 C4 C B2089 121.545 110.790 28.053 1.00 73.33 C
ATOM 19 N4 C B2089 121.989 109.546 27.868 1.00 74.60 N
ATOM 20 C5 C B2089 122.431 111.894 27.898 1.00 73.00 C
ATOM 21 C6 C B2089 121.931 113.121 28.089 1.00 72.72 C
ATOM 22 P A B2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 23 OP1 A B2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 24 OP2 A B2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 25 O5' A B2090 116.887 118.004 30.696 1.00 66.11 O
TER
Atoms:
OP1: (118.514,119.524,29.581)
OP2: (119.160,118.261,31.724)
C3': (114.179,116.970,31.235)
C1': (115.121,114.827,31.479)
C5': (115.991,117.722,29.602)
O4': (115.737,115.448,30.364)
C8: (117.398,115.207,32.532)
O2': (112.794,114.964,31.016)
C6: (117.143,114.138,35.868)
C5: (117.085,114.536,34.523)
C4: (115.866,114.414,33.883)
P: (118.429,118.310,30.434)
C4': (115.006,116.650,30.003)
C2': (113.824,115.585,31.756)
C2: (114.897,113.634,35.697)
N1: (116.007,113.685,36.438)
N3: (114.719,113.967,34.423)
N6: (118.255,114.178,36.605)
N7: (118.042,115.046,33.660)
N9: (116.082,114.825,32.586)
O5': (116.887,118.004,30.696)
O3': (113.036,117.745,30.897)
OP2: (119.160,118.261,31.724)
C3': (114.179,116.970,31.235)
C1': (115.121,114.827,31.479)
C5': (115.991,117.722,29.602)
O4': (115.737,115.448,30.364)
C8: (117.398,115.207,32.532)
O2': (112.794,114.964,31.016)
C6: (117.143,114.138,35.868)
C5: (117.085,114.536,34.523)
C4: (115.866,114.414,33.883)
P: (118.429,118.310,30.434)
C4': (115.006,116.650,30.003)
C2': (113.824,115.585,31.756)
C2: (114.897,113.634,35.697)
N1: (116.007,113.685,36.438)
N3: (114.719,113.967,34.423)
N6: (118.255,114.178,36.605)
N7: (118.042,115.046,33.660)
N9: (116.082,114.825,32.586)
O5': (116.887,118.004,30.696)
O3': (113.036,117.745,30.897)
C2: (119.765,112.195,28.574)
OP1: (125.145,117.258,27.448)
OP2: (123.927,117.622,29.668)
C4: (121.545,110.790,28.053)
O5': (122.881,116.296,27.811)
C3': (120.299,116.869,29.312)
C1': (120.065,114.654,28.607)
O4': (120.297,115.419,27.437)
C5': (121.896,117.242,27.345)
P: (124.240,116.755,28.506)
O2: (118.572,112.381,28.885)
C4': (120.517,116.814,27.803)
C2': (120.677,115.460,29.745)
O2': (120.128,115.086,30.985)
N1: (120.617,113.304,28.418)
N3: (120.262,110.953,28.382)
N4: (121.989,109.546,27.868)
C6: (121.931,113.121,28.089)
C5: (122.431,111.894,27.898)
O3': (118.914,117.071,29.547)
OP1: (125.145,117.258,27.448)
OP2: (123.927,117.622,29.668)
C4: (121.545,110.790,28.053)
O5': (122.881,116.296,27.811)
C3': (120.299,116.869,29.312)
C1': (120.065,114.654,28.607)
O4': (120.297,115.419,27.437)
C5': (121.896,117.242,27.345)
P: (124.240,116.755,28.506)
O2: (118.572,112.381,28.885)
C4': (120.517,116.814,27.803)
C2': (120.677,115.460,29.745)
O2': (120.128,115.086,30.985)
N1: (120.617,113.304,28.418)
N3: (120.262,110.953,28.382)
N4: (121.989,109.546,27.868)
C6: (121.931,113.121,28.089)
C5: (122.431,111.894,27.898)
O3': (118.914,117.071,29.547)
Image (generated by PyMOL):