Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:912:911
Extra
PDB:
ATOM 1 O3' C A 11 53.125 37.463 111.971 1.00 59.87 O
ATOM 2 P A A 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 3 OP1 A A 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 4 OP2 A A 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 5 O5' A A 12 54.898 36.116 110.857 1.00 58.41 O
ATOM 6 C5' A A 12 54.911 34.692 110.752 1.00 55.80 C
ATOM 7 C4' A A 12 55.652 34.289 109.510 1.00 55.75 C
ATOM 8 O4' A A 12 54.878 34.700 108.347 1.00 55.33 O
ATOM 9 C3' A A 12 57.025 34.939 109.354 1.00 55.39 C
ATOM 10 O3' A A 12 57.891 34.035 108.675 1.00 55.31 O
ATOM 11 C2' A A 12 56.709 36.127 108.453 1.00 55.41 C
ATOM 12 O2' A A 12 57.796 36.634 107.714 1.00 55.03 O
ATOM 13 C1' A A 12 55.687 35.499 107.515 1.00 56.02 C
ATOM 14 N9 A A 12 54.857 36.468 106.801 1.00 56.09 N
ATOM 15 C8 A A 12 53.771 37.188 107.238 1.00 55.08 C
ATOM 16 N7 A A 12 53.289 38.013 106.339 1.00 53.83 N
ATOM 17 C5 A A 12 54.104 37.815 105.235 1.00 54.84 C
ATOM 18 C6 A A 12 54.118 38.394 103.957 1.00 56.24 C
ATOM 19 N6 A A 12 53.256 39.332 103.564 1.00 56.66 N
ATOM 20 N1 A A 12 55.064 37.973 103.085 1.00 57.07 N
ATOM 21 C2 A A 12 55.932 37.028 103.487 1.00 56.36 C
ATOM 22 N3 A A 12 56.018 36.409 104.662 1.00 54.34 N
ATOM 23 C4 A A 12 55.065 36.856 105.501 1.00 55.44 C
ATOM 24 P G A 13 59.199 33.462 109.416 1.00 56.40 P
ATOM 25 OP1 G A 13 59.639 32.295 108.618 1.00 56.87 O
ATOM 26 OP2 G A 13 58.938 33.304 110.875 1.00 55.63 O
ATOM 27 O5' G A 13 60.301 34.598 109.227 1.00 57.41 O
TER
ATOM 1 O3' A B 10 54.421 40.622 108.307 1.00 57.29 O
ATOM 2 P C B 11 53.465 41.839 108.727 1.00 59.29 P
ATOM 3 OP1 C B 11 52.601 42.203 107.576 1.00 58.75 O
ATOM 4 OP2 C B 11 54.319 42.871 109.370 1.00 58.91 O
ATOM 5 O5' C B 11 52.506 41.209 109.826 1.00 60.66 O
ATOM 6 C5' C B 11 52.945 41.057 111.183 1.00 62.04 C
ATOM 7 C4' C B 11 52.479 39.737 111.735 1.00 61.72 C
ATOM 8 O4' C B 11 51.027 39.681 111.669 1.00 63.52 O
ATOM 9 C3' C B 11 52.977 38.494 111.009 1.00 61.31 C
ATOM 10 O3' C B 11 53.125 37.463 111.971 1.00 59.87 O
ATOM 11 C2' C B 11 51.823 38.168 110.070 1.00 62.50 C
ATOM 12 O2' C B 11 51.761 36.803 109.722 1.00 62.86 O
ATOM 13 C1' C B 11 50.630 38.540 110.942 1.00 63.91 C
ATOM 14 N1 C B 11 49.400 38.866 110.214 1.00 66.10 N
ATOM 15 C2 C B 11 48.285 38.043 110.381 1.00 69.47 C
ATOM 16 O2 C B 11 48.382 37.032 111.097 1.00 70.72 O
ATOM 17 N3 C B 11 47.128 38.363 109.756 1.00 71.92 N
ATOM 18 C4 C B 11 47.069 39.447 108.979 1.00 71.92 C
ATOM 19 N4 C B 11 45.904 39.735 108.395 1.00 73.51 N
ATOM 20 C5 C B 11 48.199 40.286 108.771 1.00 70.77 C
ATOM 21 C6 C B 11 49.333 39.962 109.402 1.00 68.48 C
ATOM 22 P A B 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 23 OP1 A B 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 24 OP2 A B 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 25 O5' A B 12 54.898 36.116 110.857 1.00 58.41 O
TER
ATOM 2 P A A 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 3 OP1 A A 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 4 OP2 A A 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 5 O5' A A 12 54.898 36.116 110.857 1.00 58.41 O
ATOM 6 C5' A A 12 54.911 34.692 110.752 1.00 55.80 C
ATOM 7 C4' A A 12 55.652 34.289 109.510 1.00 55.75 C
ATOM 8 O4' A A 12 54.878 34.700 108.347 1.00 55.33 O
ATOM 9 C3' A A 12 57.025 34.939 109.354 1.00 55.39 C
ATOM 10 O3' A A 12 57.891 34.035 108.675 1.00 55.31 O
ATOM 11 C2' A A 12 56.709 36.127 108.453 1.00 55.41 C
ATOM 12 O2' A A 12 57.796 36.634 107.714 1.00 55.03 O
ATOM 13 C1' A A 12 55.687 35.499 107.515 1.00 56.02 C
ATOM 14 N9 A A 12 54.857 36.468 106.801 1.00 56.09 N
ATOM 15 C8 A A 12 53.771 37.188 107.238 1.00 55.08 C
ATOM 16 N7 A A 12 53.289 38.013 106.339 1.00 53.83 N
ATOM 17 C5 A A 12 54.104 37.815 105.235 1.00 54.84 C
ATOM 18 C6 A A 12 54.118 38.394 103.957 1.00 56.24 C
ATOM 19 N6 A A 12 53.256 39.332 103.564 1.00 56.66 N
ATOM 20 N1 A A 12 55.064 37.973 103.085 1.00 57.07 N
ATOM 21 C2 A A 12 55.932 37.028 103.487 1.00 56.36 C
ATOM 22 N3 A A 12 56.018 36.409 104.662 1.00 54.34 N
ATOM 23 C4 A A 12 55.065 36.856 105.501 1.00 55.44 C
ATOM 24 P G A 13 59.199 33.462 109.416 1.00 56.40 P
ATOM 25 OP1 G A 13 59.639 32.295 108.618 1.00 56.87 O
ATOM 26 OP2 G A 13 58.938 33.304 110.875 1.00 55.63 O
ATOM 27 O5' G A 13 60.301 34.598 109.227 1.00 57.41 O
TER
ATOM 1 O3' A B 10 54.421 40.622 108.307 1.00 57.29 O
ATOM 2 P C B 11 53.465 41.839 108.727 1.00 59.29 P
ATOM 3 OP1 C B 11 52.601 42.203 107.576 1.00 58.75 O
ATOM 4 OP2 C B 11 54.319 42.871 109.370 1.00 58.91 O
ATOM 5 O5' C B 11 52.506 41.209 109.826 1.00 60.66 O
ATOM 6 C5' C B 11 52.945 41.057 111.183 1.00 62.04 C
ATOM 7 C4' C B 11 52.479 39.737 111.735 1.00 61.72 C
ATOM 8 O4' C B 11 51.027 39.681 111.669 1.00 63.52 O
ATOM 9 C3' C B 11 52.977 38.494 111.009 1.00 61.31 C
ATOM 10 O3' C B 11 53.125 37.463 111.971 1.00 59.87 O
ATOM 11 C2' C B 11 51.823 38.168 110.070 1.00 62.50 C
ATOM 12 O2' C B 11 51.761 36.803 109.722 1.00 62.86 O
ATOM 13 C1' C B 11 50.630 38.540 110.942 1.00 63.91 C
ATOM 14 N1 C B 11 49.400 38.866 110.214 1.00 66.10 N
ATOM 15 C2 C B 11 48.285 38.043 110.381 1.00 69.47 C
ATOM 16 O2 C B 11 48.382 37.032 111.097 1.00 70.72 O
ATOM 17 N3 C B 11 47.128 38.363 109.756 1.00 71.92 N
ATOM 18 C4 C B 11 47.069 39.447 108.979 1.00 71.92 C
ATOM 19 N4 C B 11 45.904 39.735 108.395 1.00 73.51 N
ATOM 20 C5 C B 11 48.199 40.286 108.771 1.00 70.77 C
ATOM 21 C6 C B 11 49.333 39.962 109.402 1.00 68.48 C
ATOM 22 P A B 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 23 OP1 A B 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 24 OP2 A B 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 25 O5' A B 12 54.898 36.116 110.857 1.00 58.41 O
TER
Atoms:
OP1: (54.434,35.796,113.281)
OP2: (55.534,37.948,112.438)
C3': (57.025,34.939,109.354)
C1': (55.687,35.499,107.515)
C5': (54.911,34.692,110.752)
O4': (54.878,34.700,108.347)
C8: (53.771,37.188,107.238)
O2': (57.796,36.634,107.714)
C6: (54.118,38.394,103.957)
C5: (54.104,37.815,105.235)
C4: (55.065,36.856,105.501)
P: (54.570,36.834,112.235)
C4': (55.652,34.289,109.510)
C2': (56.709,36.127,108.453)
C2: (55.932,37.028,103.487)
N1: (55.064,37.973,103.085)
N3: (56.018,36.409,104.662)
N6: (53.256,39.332,103.564)
N7: (53.289,38.013,106.339)
N9: (54.857,36.468,106.801)
O5': (54.898,36.116,110.857)
O3': (57.891,34.035,108.675)
OP2: (55.534,37.948,112.438)
C3': (57.025,34.939,109.354)
C1': (55.687,35.499,107.515)
C5': (54.911,34.692,110.752)
O4': (54.878,34.700,108.347)
C8: (53.771,37.188,107.238)
O2': (57.796,36.634,107.714)
C6: (54.118,38.394,103.957)
C5: (54.104,37.815,105.235)
C4: (55.065,36.856,105.501)
P: (54.570,36.834,112.235)
C4': (55.652,34.289,109.510)
C2': (56.709,36.127,108.453)
C2: (55.932,37.028,103.487)
N1: (55.064,37.973,103.085)
N3: (56.018,36.409,104.662)
N6: (53.256,39.332,103.564)
N7: (53.289,38.013,106.339)
N9: (54.857,36.468,106.801)
O5': (54.898,36.116,110.857)
O3': (57.891,34.035,108.675)
C2: (48.285,38.043,110.381)
OP1: (52.601,42.203,107.576)
OP2: (54.319,42.871,109.370)
C4: (47.069,39.447,108.979)
O5': (52.506,41.209,109.826)
C3': (52.977,38.494,111.009)
C1': (50.630,38.540,110.942)
O4': (51.027,39.681,111.669)
C5': (52.945,41.057,111.183)
P: (53.465,41.839,108.727)
O2: (48.382,37.032,111.097)
C4': (52.479,39.737,111.735)
C2': (51.823,38.168,110.070)
O2': (51.761,36.803,109.722)
N1: (49.400,38.866,110.214)
N3: (47.128,38.363,109.756)
N4: (45.904,39.735,108.395)
C6: (49.333,39.962,109.402)
C5: (48.199,40.286,108.771)
O3': (53.125,37.463,111.971)
OP1: (52.601,42.203,107.576)
OP2: (54.319,42.871,109.370)
C4: (47.069,39.447,108.979)
O5': (52.506,41.209,109.826)
C3': (52.977,38.494,111.009)
C1': (50.630,38.540,110.942)
O4': (51.027,39.681,111.669)
C5': (52.945,41.057,111.183)
P: (53.465,41.839,108.727)
O2: (48.382,37.032,111.097)
C4': (52.479,39.737,111.735)
C2': (51.823,38.168,110.070)
O2': (51.761,36.803,109.722)
N1: (49.400,38.866,110.214)
N3: (47.128,38.363,109.756)
N4: (45.904,39.735,108.395)
C6: (49.333,39.962,109.402)
C5: (48.199,40.286,108.771)
O3': (53.125,37.463,111.971)
Image (generated by PyMOL):