Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11134:11241
Extra
PDB:
ATOM 1 O3' C A1133 33.811 12.992 6.859 1.00 54.29 O
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1240 36.592 2.259 11.021 1.00 43.88 O
ATOM 2 P C B1241 35.634 2.864 12.176 1.00 41.99 P
ATOM 3 OP1 C B1241 36.511 3.577 13.121 1.00 41.65 O
ATOM 4 OP2 C B1241 34.793 1.738 12.682 1.00 41.82 O
ATOM 5 O5' C B1241 34.738 3.916 11.407 1.00 42.38 O
ATOM 6 C5' C B1241 35.256 5.169 11.076 1.00 42.54 C
ATOM 7 C4' C B1241 34.262 5.981 10.318 1.00 42.94 C
ATOM 8 O4' C B1241 33.858 5.262 9.130 1.00 43.35 O
ATOM 9 C3' C B1241 32.967 6.246 11.014 1.00 42.83 C
ATOM 10 O3' C B1241 33.043 7.255 11.981 1.00 42.58 O
ATOM 11 C2' C B1241 32.057 6.572 9.859 1.00 43.35 C
ATOM 12 O2' C B1241 32.328 7.857 9.348 1.00 43.61 O
ATOM 13 C1' C B1241 32.521 5.554 8.837 1.00 43.59 C
ATOM 14 N1 C B1241 31.742 4.320 8.944 1.00 43.54 N
ATOM 15 C2 C B1241 30.500 4.325 8.275 1.00 43.91 C
ATOM 16 O2 C B1241 30.174 5.328 7.609 1.00 44.26 O
ATOM 17 N3 C B1241 29.714 3.231 8.349 1.00 43.89 N
ATOM 18 C4 C B1241 30.158 2.206 9.051 1.00 43.53 C
ATOM 19 N4 C B1241 29.372 1.156 9.105 1.00 43.54 N
ATOM 20 C5 C B1241 31.408 2.197 9.736 1.00 43.16 C
ATOM 21 C6 C B1241 32.176 3.265 9.684 1.00 43.17 C
ATOM 22 P C B1242 32.038 7.194 13.238 1.00 43.48 P
ATOM 23 OP1 C B1242 32.422 8.249 14.200 1.00 43.22 O
ATOM 24 OP2 C B1242 31.990 5.775 13.702 1.00 43.21 O
ATOM 25 O5' C B1242 30.682 7.600 12.584 1.00 43.86 O
TER
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1240 36.592 2.259 11.021 1.00 43.88 O
ATOM 2 P C B1241 35.634 2.864 12.176 1.00 41.99 P
ATOM 3 OP1 C B1241 36.511 3.577 13.121 1.00 41.65 O
ATOM 4 OP2 C B1241 34.793 1.738 12.682 1.00 41.82 O
ATOM 5 O5' C B1241 34.738 3.916 11.407 1.00 42.38 O
ATOM 6 C5' C B1241 35.256 5.169 11.076 1.00 42.54 C
ATOM 7 C4' C B1241 34.262 5.981 10.318 1.00 42.94 C
ATOM 8 O4' C B1241 33.858 5.262 9.130 1.00 43.35 O
ATOM 9 C3' C B1241 32.967 6.246 11.014 1.00 42.83 C
ATOM 10 O3' C B1241 33.043 7.255 11.981 1.00 42.58 O
ATOM 11 C2' C B1241 32.057 6.572 9.859 1.00 43.35 C
ATOM 12 O2' C B1241 32.328 7.857 9.348 1.00 43.61 O
ATOM 13 C1' C B1241 32.521 5.554 8.837 1.00 43.59 C
ATOM 14 N1 C B1241 31.742 4.320 8.944 1.00 43.54 N
ATOM 15 C2 C B1241 30.500 4.325 8.275 1.00 43.91 C
ATOM 16 O2 C B1241 30.174 5.328 7.609 1.00 44.26 O
ATOM 17 N3 C B1241 29.714 3.231 8.349 1.00 43.89 N
ATOM 18 C4 C B1241 30.158 2.206 9.051 1.00 43.53 C
ATOM 19 N4 C B1241 29.372 1.156 9.105 1.00 43.54 N
ATOM 20 C5 C B1241 31.408 2.197 9.736 1.00 43.16 C
ATOM 21 C6 C B1241 32.176 3.265 9.684 1.00 43.17 C
ATOM 22 P C B1242 32.038 7.194 13.238 1.00 43.48 P
ATOM 23 OP1 C B1242 32.422 8.249 14.200 1.00 43.22 O
ATOM 24 OP2 C B1242 31.990 5.775 13.702 1.00 43.21 O
ATOM 25 O5' C B1242 30.682 7.600 12.584 1.00 43.86 O
TER
Atoms:
OP1: (31.590,11.919,6.301)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
C2: (30.500,4.325,8.275)
OP1: (36.511,3.577,13.121)
OP2: (34.793,1.738,12.682)
C4: (30.158,2.206,9.051)
O5': (34.738,3.916,11.407)
C3': (32.967,6.246,11.014)
C1': (32.521,5.554,8.837)
O4': (33.858,5.262,9.130)
C5': (35.256,5.169,11.076)
P: (35.634,2.864,12.176)
O2: (30.174,5.328,7.609)
C4': (34.262,5.981,10.318)
C2': (32.057,6.572,9.859)
O2': (32.328,7.857,9.348)
N1: (31.742,4.320,8.944)
N3: (29.714,3.231,8.349)
N4: (29.372,1.156,9.105)
C6: (32.176,3.265,9.684)
C5: (31.408,2.197,9.736)
O3': (33.043,7.255,11.981)
OP1: (36.511,3.577,13.121)
OP2: (34.793,1.738,12.682)
C4: (30.158,2.206,9.051)
O5': (34.738,3.916,11.407)
C3': (32.967,6.246,11.014)
C1': (32.521,5.554,8.837)
O4': (33.858,5.262,9.130)
C5': (35.256,5.169,11.076)
P: (35.634,2.864,12.176)
O2: (30.174,5.328,7.609)
C4': (34.262,5.981,10.318)
C2': (32.057,6.572,9.859)
O2': (32.328,7.857,9.348)
N1: (31.742,4.320,8.944)
N3: (29.714,3.231,8.349)
N4: (29.372,1.156,9.105)
C6: (32.176,3.265,9.684)
C5: (31.408,2.197,9.736)
O3': (33.043,7.255,11.981)
Image (generated by PyMOL):