Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01223:01222
Extra
PDB:
ATOM 1 O3' C A1222 7.679 87.949 97.814 1.00 42.60 O
ATOM 2 P U A1223 7.347 88.151 96.256 1.00 42.85 P
ATOM 3 OP1 U A1223 6.503 87.008 95.811 1.00 41.95 O
ATOM 4 OP2 U A1223 8.625 88.435 95.539 1.00 43.11 O
ATOM 5 O5' U A1223 6.462 89.472 96.265 1.00 41.35 O
ATOM 6 C5' U A1223 5.175 89.467 96.897 1.00 40.70 C
ATOM 7 C4' U A1223 4.567 90.845 96.878 1.00 40.56 C
ATOM 8 O4' U A1223 5.360 91.742 97.696 1.00 41.52 O
ATOM 9 C3' U A1223 4.510 91.546 95.535 1.00 40.11 C
ATOM 10 O3' U A1223 3.429 91.072 94.744 1.00 44.80 O
ATOM 11 C2' U A1223 4.340 92.999 95.957 1.00 39.75 C
ATOM 12 O2' U A1223 3.034 93.307 96.384 1.00 36.36 O
ATOM 13 C1' U A1223 5.268 93.064 97.172 1.00 39.90 C
ATOM 14 N1 U A1223 6.616 93.547 96.812 1.00 37.83 N
ATOM 15 C2 U A1223 6.802 94.916 96.783 1.00 37.45 C
ATOM 16 O2 U A1223 5.934 95.705 97.105 1.00 36.77 O
ATOM 17 N3 U A1223 8.045 95.327 96.370 1.00 36.79 N
ATOM 18 C4 U A1223 9.108 94.528 96.011 1.00 37.27 C
ATOM 19 O4 U A1223 10.167 95.057 95.652 1.00 37.84 O
ATOM 20 C5 U A1223 8.853 93.119 96.101 1.00 35.18 C
ATOM 21 C6 U A1223 7.648 92.687 96.489 1.00 33.94 C
ATOM 22 P G A1224 3.477 91.241 93.143 1.00 45.25 P
ATOM 23 OP1 G A1224 2.434 90.345 92.580 1.00 43.86 O
ATOM 24 OP2 G A1224 4.886 91.091 92.692 1.00 46.44 O
ATOM 25 O5' G A1224 3.009 92.751 92.921 1.00 43.05 O
TER
ATOM 1 O3' C B1221 13.595 87.757 98.875 1.00 37.05 O
ATOM 2 P C B1222 12.771 87.885 97.500 1.00 36.55 P
ATOM 3 OP1 C B1222 12.818 86.541 96.880 1.00 33.14 O
ATOM 4 OP2 C B1222 13.257 89.068 96.722 1.00 37.30 O
ATOM 5 O5' C B1222 11.299 88.249 97.984 1.00 35.85 O
ATOM 6 C5' C B1222 10.612 87.446 98.950 1.00 36.54 C
ATOM 7 C4' C B1222 9.426 88.200 99.495 1.00 37.68 C
ATOM 8 O4' C B1222 9.868 89.310 100.320 1.00 39.35 O
ATOM 9 C3' C B1222 8.537 88.870 98.466 1.00 40.11 C
ATOM 10 O3' C B1222 7.679 87.949 97.814 1.00 42.60 O
ATOM 11 C2' C B1222 7.798 89.903 99.311 1.00 40.29 C
ATOM 12 O2' C B1222 6.758 89.339 100.093 1.00 41.05 O
ATOM 13 C1' C B1222 8.923 90.376 100.236 1.00 38.34 C
ATOM 14 N1 C B1222 9.606 91.588 99.732 1.00 37.46 N
ATOM 15 C2 C B1222 9.034 92.840 99.995 1.00 35.39 C
ATOM 16 O2 C B1222 7.969 92.899 100.621 1.00 34.96 O
ATOM 17 N3 C B1222 9.655 93.958 99.554 1.00 36.49 N
ATOM 18 C4 C B1222 10.794 93.864 98.863 1.00 35.35 C
ATOM 19 N4 C B1222 11.360 95.004 98.439 1.00 34.04 N
ATOM 20 C5 C B1222 11.397 92.604 98.573 1.00 35.31 C
ATOM 21 C6 C B1222 10.775 91.501 99.022 1.00 35.32 C
ATOM 22 P U B1223 7.347 88.151 96.256 1.00 42.85 P
ATOM 23 OP1 U B1223 6.503 87.008 95.811 1.00 41.95 O
ATOM 24 OP2 U B1223 8.625 88.435 95.539 1.00 43.11 O
ATOM 25 O5' U B1223 6.462 89.472 96.265 1.00 41.35 O
TER
ATOM 2 P U A1223 7.347 88.151 96.256 1.00 42.85 P
ATOM 3 OP1 U A1223 6.503 87.008 95.811 1.00 41.95 O
ATOM 4 OP2 U A1223 8.625 88.435 95.539 1.00 43.11 O
ATOM 5 O5' U A1223 6.462 89.472 96.265 1.00 41.35 O
ATOM 6 C5' U A1223 5.175 89.467 96.897 1.00 40.70 C
ATOM 7 C4' U A1223 4.567 90.845 96.878 1.00 40.56 C
ATOM 8 O4' U A1223 5.360 91.742 97.696 1.00 41.52 O
ATOM 9 C3' U A1223 4.510 91.546 95.535 1.00 40.11 C
ATOM 10 O3' U A1223 3.429 91.072 94.744 1.00 44.80 O
ATOM 11 C2' U A1223 4.340 92.999 95.957 1.00 39.75 C
ATOM 12 O2' U A1223 3.034 93.307 96.384 1.00 36.36 O
ATOM 13 C1' U A1223 5.268 93.064 97.172 1.00 39.90 C
ATOM 14 N1 U A1223 6.616 93.547 96.812 1.00 37.83 N
ATOM 15 C2 U A1223 6.802 94.916 96.783 1.00 37.45 C
ATOM 16 O2 U A1223 5.934 95.705 97.105 1.00 36.77 O
ATOM 17 N3 U A1223 8.045 95.327 96.370 1.00 36.79 N
ATOM 18 C4 U A1223 9.108 94.528 96.011 1.00 37.27 C
ATOM 19 O4 U A1223 10.167 95.057 95.652 1.00 37.84 O
ATOM 20 C5 U A1223 8.853 93.119 96.101 1.00 35.18 C
ATOM 21 C6 U A1223 7.648 92.687 96.489 1.00 33.94 C
ATOM 22 P G A1224 3.477 91.241 93.143 1.00 45.25 P
ATOM 23 OP1 G A1224 2.434 90.345 92.580 1.00 43.86 O
ATOM 24 OP2 G A1224 4.886 91.091 92.692 1.00 46.44 O
ATOM 25 O5' G A1224 3.009 92.751 92.921 1.00 43.05 O
TER
ATOM 1 O3' C B1221 13.595 87.757 98.875 1.00 37.05 O
ATOM 2 P C B1222 12.771 87.885 97.500 1.00 36.55 P
ATOM 3 OP1 C B1222 12.818 86.541 96.880 1.00 33.14 O
ATOM 4 OP2 C B1222 13.257 89.068 96.722 1.00 37.30 O
ATOM 5 O5' C B1222 11.299 88.249 97.984 1.00 35.85 O
ATOM 6 C5' C B1222 10.612 87.446 98.950 1.00 36.54 C
ATOM 7 C4' C B1222 9.426 88.200 99.495 1.00 37.68 C
ATOM 8 O4' C B1222 9.868 89.310 100.320 1.00 39.35 O
ATOM 9 C3' C B1222 8.537 88.870 98.466 1.00 40.11 C
ATOM 10 O3' C B1222 7.679 87.949 97.814 1.00 42.60 O
ATOM 11 C2' C B1222 7.798 89.903 99.311 1.00 40.29 C
ATOM 12 O2' C B1222 6.758 89.339 100.093 1.00 41.05 O
ATOM 13 C1' C B1222 8.923 90.376 100.236 1.00 38.34 C
ATOM 14 N1 C B1222 9.606 91.588 99.732 1.00 37.46 N
ATOM 15 C2 C B1222 9.034 92.840 99.995 1.00 35.39 C
ATOM 16 O2 C B1222 7.969 92.899 100.621 1.00 34.96 O
ATOM 17 N3 C B1222 9.655 93.958 99.554 1.00 36.49 N
ATOM 18 C4 C B1222 10.794 93.864 98.863 1.00 35.35 C
ATOM 19 N4 C B1222 11.360 95.004 98.439 1.00 34.04 N
ATOM 20 C5 C B1222 11.397 92.604 98.573 1.00 35.31 C
ATOM 21 C6 C B1222 10.775 91.501 99.022 1.00 35.32 C
ATOM 22 P U B1223 7.347 88.151 96.256 1.00 42.85 P
ATOM 23 OP1 U B1223 6.503 87.008 95.811 1.00 41.95 O
ATOM 24 OP2 U B1223 8.625 88.435 95.539 1.00 43.11 O
ATOM 25 O5' U B1223 6.462 89.472 96.265 1.00 41.35 O
TER
Atoms:
C4: (9.108,94.528,96.011)
N3: (8.045,95.327,96.370)
OP1: (6.503,87.008,95.811)
OP2: (8.625,88.435,95.539)
C2: (6.802,94.916,96.783)
C1': (5.268,93.064,97.172)
C3': (4.510,91.546,95.535)
O5': (6.462,89.472,96.265)
O4': (5.360,91.742,97.696)
C5': (5.175,89.467,96.897)
P: (7.347,88.151,96.256)
C4': (4.567,90.845,96.878)
C2': (4.340,92.999,95.957)
O2': (3.034,93.307,96.384)
N1: (6.616,93.547,96.812)
O4: (10.167,95.057,95.652)
O2: (5.934,95.705,97.105)
C6: (7.648,92.687,96.489)
C5: (8.853,93.119,96.101)
O3': (3.429,91.072,94.744)
N3: (8.045,95.327,96.370)
OP1: (6.503,87.008,95.811)
OP2: (8.625,88.435,95.539)
C2: (6.802,94.916,96.783)
C1': (5.268,93.064,97.172)
C3': (4.510,91.546,95.535)
O5': (6.462,89.472,96.265)
O4': (5.360,91.742,97.696)
C5': (5.175,89.467,96.897)
P: (7.347,88.151,96.256)
C4': (4.567,90.845,96.878)
C2': (4.340,92.999,95.957)
O2': (3.034,93.307,96.384)
N1: (6.616,93.547,96.812)
O4: (10.167,95.057,95.652)
O2: (5.934,95.705,97.105)
C6: (7.648,92.687,96.489)
C5: (8.853,93.119,96.101)
O3': (3.429,91.072,94.744)
C2: (9.034,92.840,99.995)
OP1: (12.818,86.541,96.880)
OP2: (13.257,89.068,96.722)
C4: (10.794,93.864,98.863)
O5': (11.299,88.249,97.984)
C3': (8.537,88.870,98.466)
C1': (8.923,90.376,100.236)
O4': (9.868,89.310,100.320)
C5': (10.612,87.446,98.950)
P: (12.771,87.885,97.500)
O2: (7.969,92.899,100.621)
C4': (9.426,88.200,99.495)
C2': (7.798,89.903,99.311)
O2': (6.758,89.339,100.093)
N1: (9.606,91.588,99.732)
N3: (9.655,93.958,99.554)
N4: (11.360,95.004,98.439)
C6: (10.775,91.501,99.022)
C5: (11.397,92.604,98.573)
O3': (7.679,87.949,97.814)
OP1: (12.818,86.541,96.880)
OP2: (13.257,89.068,96.722)
C4: (10.794,93.864,98.863)
O5': (11.299,88.249,97.984)
C3': (8.537,88.870,98.466)
C1': (8.923,90.376,100.236)
O4': (9.868,89.310,100.320)
C5': (10.612,87.446,98.950)
P: (12.771,87.885,97.500)
O2: (7.969,92.899,100.621)
C4': (9.426,88.200,99.495)
C2': (7.798,89.903,99.311)
O2': (6.758,89.339,100.093)
N1: (9.606,91.588,99.732)
N3: (9.655,93.958,99.554)
N4: (11.360,95.004,98.439)
C6: (10.775,91.501,99.022)
C5: (11.397,92.604,98.573)
O3': (7.679,87.949,97.814)
Image (generated by PyMOL):