Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNN:B5:B4
Extra
PDB:
ATOM 1 O3' C A 4 9.346 1.770 -10.181 1.00 41.23 O
ATOM 2 P A A 5 8.049 1.553 -9.265 1.00 43.80 P
ATOM 3 OP1 A A 5 6.928 2.262 -9.924 1.00 39.52 O
ATOM 4 OP2 A A 5 8.401 1.858 -7.853 1.00 37.45 O
ATOM 5 O5' A A 5 7.768 -0.008 -9.394 1.00 39.65 O
ATOM 6 C5' A A 5 7.307 -0.561 -10.618 1.00 36.56 C
ATOM 7 C4' A A 5 7.841 -1.964 -10.781 1.00 31.52 C
ATOM 8 O4' A A 5 9.272 -1.912 -11.045 1.00 34.71 O
ATOM 9 C3' A A 5 7.708 -2.810 -9.533 1.00 33.03 C
ATOM 10 O3' A A 5 6.416 -3.400 -9.459 1.00 34.10 O
ATOM 11 C2' A A 5 8.838 -3.817 -9.699 1.00 34.88 C
ATOM 12 O2' A A 5 8.504 -4.845 -10.600 1.00 32.56 O
ATOM 13 C1' A A 5 9.924 -2.954 -10.336 1.00 40.98 C
ATOM 14 N9 A A 5 10.853 -2.346 -9.385 1.00 42.01 N
ATOM 15 C8 A A 5 11.048 -1.008 -9.181 1.00 38.97 C
ATOM 16 N7 A A 5 11.952 -0.739 -8.271 1.00 45.56 N
ATOM 17 C5 A A 5 12.381 -1.987 -7.843 1.00 34.47 C
ATOM 18 C6 A A 5 13.319 -2.379 -6.876 1.00 36.09 C
ATOM 19 N6 A A 5 14.019 -1.514 -6.138 1.00 38.67 N
ATOM 20 N1 A A 5 13.511 -3.701 -6.685 1.00 34.73 N
ATOM 21 C2 A A 5 12.796 -4.562 -7.420 1.00 33.58 C
ATOM 22 N3 A A 5 11.878 -4.313 -8.360 1.00 40.81 N
ATOM 23 C4 A A 5 11.715 -2.989 -8.523 1.00 40.31 C
ATOM 24 P C A 6 5.643 -3.433 -8.053 1.00 40.18 P
ATOM 25 OP1 C A 6 4.325 -4.060 -8.267 1.00 36.68 O
ATOM 26 OP2 C A 6 5.732 -2.090 -7.428 1.00 43.63 O
ATOM 27 O5' C A 6 6.533 -4.421 -7.164 1.00 44.29 O
TER
ATOM 1 O3' U B 3 8.354 6.085 -14.434 1.00 35.09 O
ATOM 2 P C B 4 7.446 5.441 -13.286 1.00 43.70 P
ATOM 3 OP1 C B 4 6.558 4.479 -13.951 1.00 45.53 O
ATOM 4 OP2 C B 4 6.878 6.507 -12.451 1.00 43.22 O
ATOM 5 O5' C B 4 8.460 4.652 -12.336 1.00 42.06 O
ATOM 6 C5' C B 4 9.223 3.560 -12.812 1.00 34.12 C
ATOM 7 C4' C B 4 10.309 3.228 -11.822 1.00 32.50 C
ATOM 8 O4' C B 4 11.268 4.311 -11.752 1.00 33.48 O
ATOM 9 C3' C B 4 9.848 3.074 -10.387 1.00 38.40 C
ATOM 10 O3' C B 4 9.346 1.770 -10.181 1.00 41.23 O
ATOM 11 C2' C B 4 11.144 3.276 -9.620 1.00 38.24 C
ATOM 12 O2' C B 4 11.944 2.117 -9.604 1.00 40.83 O
ATOM 13 C1' C B 4 11.812 4.383 -10.439 1.00 38.95 C
ATOM 14 N1 C B 4 11.518 5.712 -9.885 1.00 36.23 N
ATOM 15 C2 C B 4 12.327 6.206 -8.866 1.00 37.58 C
ATOM 16 O2 C B 4 13.277 5.516 -8.468 1.00 33.52 O
ATOM 17 N3 C B 4 12.053 7.426 -8.331 1.00 37.61 N
ATOM 18 C4 C B 4 11.013 8.130 -8.777 1.00 39.04 C
ATOM 19 N4 C B 4 10.777 9.311 -8.214 1.00 42.69 N
ATOM 20 C5 C B 4 10.170 7.650 -9.823 1.00 42.05 C
ATOM 21 C6 C B 4 10.459 6.447 -10.347 1.00 39.78 C
ATOM 22 P A B 5 8.049 1.553 -9.265 1.00 43.80 P
ATOM 23 OP1 A B 5 6.928 2.262 -9.924 1.00 39.52 O
ATOM 24 OP2 A B 5 8.401 1.858 -7.853 1.00 37.45 O
ATOM 25 O5' A B 5 7.768 -0.008 -9.394 1.00 39.65 O
TER
ATOM 2 P A A 5 8.049 1.553 -9.265 1.00 43.80 P
ATOM 3 OP1 A A 5 6.928 2.262 -9.924 1.00 39.52 O
ATOM 4 OP2 A A 5 8.401 1.858 -7.853 1.00 37.45 O
ATOM 5 O5' A A 5 7.768 -0.008 -9.394 1.00 39.65 O
ATOM 6 C5' A A 5 7.307 -0.561 -10.618 1.00 36.56 C
ATOM 7 C4' A A 5 7.841 -1.964 -10.781 1.00 31.52 C
ATOM 8 O4' A A 5 9.272 -1.912 -11.045 1.00 34.71 O
ATOM 9 C3' A A 5 7.708 -2.810 -9.533 1.00 33.03 C
ATOM 10 O3' A A 5 6.416 -3.400 -9.459 1.00 34.10 O
ATOM 11 C2' A A 5 8.838 -3.817 -9.699 1.00 34.88 C
ATOM 12 O2' A A 5 8.504 -4.845 -10.600 1.00 32.56 O
ATOM 13 C1' A A 5 9.924 -2.954 -10.336 1.00 40.98 C
ATOM 14 N9 A A 5 10.853 -2.346 -9.385 1.00 42.01 N
ATOM 15 C8 A A 5 11.048 -1.008 -9.181 1.00 38.97 C
ATOM 16 N7 A A 5 11.952 -0.739 -8.271 1.00 45.56 N
ATOM 17 C5 A A 5 12.381 -1.987 -7.843 1.00 34.47 C
ATOM 18 C6 A A 5 13.319 -2.379 -6.876 1.00 36.09 C
ATOM 19 N6 A A 5 14.019 -1.514 -6.138 1.00 38.67 N
ATOM 20 N1 A A 5 13.511 -3.701 -6.685 1.00 34.73 N
ATOM 21 C2 A A 5 12.796 -4.562 -7.420 1.00 33.58 C
ATOM 22 N3 A A 5 11.878 -4.313 -8.360 1.00 40.81 N
ATOM 23 C4 A A 5 11.715 -2.989 -8.523 1.00 40.31 C
ATOM 24 P C A 6 5.643 -3.433 -8.053 1.00 40.18 P
ATOM 25 OP1 C A 6 4.325 -4.060 -8.267 1.00 36.68 O
ATOM 26 OP2 C A 6 5.732 -2.090 -7.428 1.00 43.63 O
ATOM 27 O5' C A 6 6.533 -4.421 -7.164 1.00 44.29 O
TER
ATOM 1 O3' U B 3 8.354 6.085 -14.434 1.00 35.09 O
ATOM 2 P C B 4 7.446 5.441 -13.286 1.00 43.70 P
ATOM 3 OP1 C B 4 6.558 4.479 -13.951 1.00 45.53 O
ATOM 4 OP2 C B 4 6.878 6.507 -12.451 1.00 43.22 O
ATOM 5 O5' C B 4 8.460 4.652 -12.336 1.00 42.06 O
ATOM 6 C5' C B 4 9.223 3.560 -12.812 1.00 34.12 C
ATOM 7 C4' C B 4 10.309 3.228 -11.822 1.00 32.50 C
ATOM 8 O4' C B 4 11.268 4.311 -11.752 1.00 33.48 O
ATOM 9 C3' C B 4 9.848 3.074 -10.387 1.00 38.40 C
ATOM 10 O3' C B 4 9.346 1.770 -10.181 1.00 41.23 O
ATOM 11 C2' C B 4 11.144 3.276 -9.620 1.00 38.24 C
ATOM 12 O2' C B 4 11.944 2.117 -9.604 1.00 40.83 O
ATOM 13 C1' C B 4 11.812 4.383 -10.439 1.00 38.95 C
ATOM 14 N1 C B 4 11.518 5.712 -9.885 1.00 36.23 N
ATOM 15 C2 C B 4 12.327 6.206 -8.866 1.00 37.58 C
ATOM 16 O2 C B 4 13.277 5.516 -8.468 1.00 33.52 O
ATOM 17 N3 C B 4 12.053 7.426 -8.331 1.00 37.61 N
ATOM 18 C4 C B 4 11.013 8.130 -8.777 1.00 39.04 C
ATOM 19 N4 C B 4 10.777 9.311 -8.214 1.00 42.69 N
ATOM 20 C5 C B 4 10.170 7.650 -9.823 1.00 42.05 C
ATOM 21 C6 C B 4 10.459 6.447 -10.347 1.00 39.78 C
ATOM 22 P A B 5 8.049 1.553 -9.265 1.00 43.80 P
ATOM 23 OP1 A B 5 6.928 2.262 -9.924 1.00 39.52 O
ATOM 24 OP2 A B 5 8.401 1.858 -7.853 1.00 37.45 O
ATOM 25 O5' A B 5 7.768 -0.008 -9.394 1.00 39.65 O
TER
Atoms:
OP1: (6.928,2.262,-9.924)
OP2: (8.401,1.858,-7.853)
C3': (7.708,-2.810,-9.533)
C1': (9.924,-2.954,-10.336)
C5': (7.307,-0.561,-10.618)
O4': (9.272,-1.912,-11.045)
C8: (11.048,-1.008,-9.181)
O2': (8.504,-4.845,-10.600)
C6: (13.319,-2.379,-6.876)
C5: (12.381,-1.987,-7.843)
C4: (11.715,-2.989,-8.523)
P: (8.049,1.553,-9.265)
C4': (7.841,-1.964,-10.781)
C2': (8.838,-3.817,-9.699)
C2: (12.796,-4.562,-7.420)
N1: (13.511,-3.701,-6.685)
N3: (11.878,-4.313,-8.360)
N6: (14.019,-1.514,-6.138)
N7: (11.952,-0.739,-8.271)
N9: (10.853,-2.346,-9.385)
O5': (7.768,-0.008,-9.394)
O3': (6.416,-3.400,-9.459)
OP2: (8.401,1.858,-7.853)
C3': (7.708,-2.810,-9.533)
C1': (9.924,-2.954,-10.336)
C5': (7.307,-0.561,-10.618)
O4': (9.272,-1.912,-11.045)
C8: (11.048,-1.008,-9.181)
O2': (8.504,-4.845,-10.600)
C6: (13.319,-2.379,-6.876)
C5: (12.381,-1.987,-7.843)
C4: (11.715,-2.989,-8.523)
P: (8.049,1.553,-9.265)
C4': (7.841,-1.964,-10.781)
C2': (8.838,-3.817,-9.699)
C2: (12.796,-4.562,-7.420)
N1: (13.511,-3.701,-6.685)
N3: (11.878,-4.313,-8.360)
N6: (14.019,-1.514,-6.138)
N7: (11.952,-0.739,-8.271)
N9: (10.853,-2.346,-9.385)
O5': (7.768,-0.008,-9.394)
O3': (6.416,-3.400,-9.459)
C2: (12.327,6.206,-8.866)
OP1: (6.558,4.479,-13.951)
OP2: (6.878,6.507,-12.451)
C4: (11.013,8.130,-8.777)
O5': (8.460,4.652,-12.336)
C3': (9.848,3.074,-10.387)
C1': (11.812,4.383,-10.439)
O4': (11.268,4.311,-11.752)
C5': (9.223,3.560,-12.812)
P: (7.446,5.441,-13.286)
O2: (13.277,5.516,-8.468)
C4': (10.309,3.228,-11.822)
C2': (11.144,3.276,-9.620)
O2': (11.944,2.117,-9.604)
N1: (11.518,5.712,-9.885)
N3: (12.053,7.426,-8.331)
N4: (10.777,9.311,-8.214)
C6: (10.459,6.447,-10.347)
C5: (10.170,7.650,-9.823)
O3': (9.346,1.770,-10.181)
OP1: (6.558,4.479,-13.951)
OP2: (6.878,6.507,-12.451)
C4: (11.013,8.130,-8.777)
O5': (8.460,4.652,-12.336)
C3': (9.848,3.074,-10.387)
C1': (11.812,4.383,-10.439)
O4': (11.268,4.311,-11.752)
C5': (9.223,3.560,-12.812)
P: (7.446,5.441,-13.286)
O2: (13.277,5.516,-8.468)
C4': (10.309,3.228,-11.822)
C2': (11.144,3.276,-9.620)
O2': (11.944,2.117,-9.604)
N1: (11.518,5.712,-9.885)
N3: (12.053,7.426,-8.331)
N4: (10.777,9.311,-8.214)
C6: (10.459,6.447,-10.347)
C5: (10.170,7.650,-9.823)
O3': (9.346,1.770,-10.181)
Image (generated by PyMOL):