Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02090:02089
Extra
PDB:
ATOM 1 O3' C A2089 119.015 116.758 29.757 1.00 63.86 O
ATOM 2 P A A2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 3 OP1 A A2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 4 OP2 A A2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 5 O5' A A2090 116.912 117.863 30.558 1.00 62.93 O
ATOM 6 C5' A A2090 116.043 117.480 29.473 1.00 61.46 C
ATOM 7 C4' A A2090 115.080 116.412 29.931 1.00 61.06 C
ATOM 8 O4' A A2090 115.832 115.240 30.340 1.00 61.27 O
ATOM 9 C3' A A2090 114.256 116.773 31.153 1.00 60.81 C
ATOM 10 O3' A A2090 113.099 117.518 30.789 1.00 60.98 O
ATOM 11 C2' A A2090 113.919 115.406 31.732 1.00 60.84 C
ATOM 12 O2' A A2090 112.887 114.749 31.024 1.00 60.87 O
ATOM 13 C1' A A2090 115.220 114.647 31.471 1.00 60.75 C
ATOM 14 N9 A A2090 116.185 114.661 32.574 1.00 61.44 N
ATOM 15 C8 A A2090 117.500 115.052 32.517 1.00 61.42 C
ATOM 16 N7 A A2090 118.153 114.885 33.640 1.00 62.20 N
ATOM 17 C5 A A2090 117.202 114.362 34.505 1.00 62.23 C
ATOM 18 C6 A A2090 117.271 113.946 35.846 1.00 61.80 C
ATOM 19 N6 A A2090 118.388 113.973 36.574 1.00 60.90 N
ATOM 20 N1 A A2090 116.140 113.485 36.418 1.00 61.91 N
ATOM 21 C2 A A2090 115.023 113.443 35.685 1.00 61.58 C
ATOM 22 N3 A A2090 114.834 113.793 34.415 1.00 62.94 N
ATOM 23 C4 A A2090 115.977 114.246 33.871 1.00 62.42 C
ATOM 24 P C A2091 112.776 118.900 31.544 1.00 61.30 P
ATOM 25 OP1 C A2091 111.388 119.280 31.184 1.00 60.03 O
ATOM 26 OP2 C A2091 113.884 119.851 31.281 1.00 61.64 O
ATOM 27 O5' C A2091 112.820 118.511 33.088 1.00 58.52 O
TER
ATOM 1 O3' U B2088 124.768 115.210 29.032 1.00 71.18 O
ATOM 2 P C B2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 3 OP1 C B2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 4 OP2 C B2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 5 O5' C B2089 122.926 116.217 27.734 1.00 69.53 O
ATOM 6 C5' C B2089 121.882 117.164 27.428 1.00 67.19 C
ATOM 7 C4' C B2089 120.548 116.645 27.928 1.00 65.38 C
ATOM 8 O4' C B2089 120.367 115.260 27.502 1.00 64.20 O
ATOM 9 C3' C B2089 120.391 116.620 29.447 1.00 64.76 C
ATOM 10 O3' C B2089 119.015 116.758 29.757 1.00 63.86 O
ATOM 11 C2' C B2089 120.802 115.200 29.793 1.00 63.79 C
ATOM 12 O2' C B2089 120.288 114.765 31.027 1.00 62.56 O
ATOM 13 C1' C B2089 120.156 114.446 28.639 1.00 65.35 C
ATOM 14 N1 C B2089 120.702 113.105 28.395 1.00 67.54 N
ATOM 15 C2 C B2089 119.865 111.992 28.583 1.00 69.48 C
ATOM 16 O2 C B2089 118.684 112.170 28.939 1.00 70.01 O
ATOM 17 N3 C B2089 120.361 110.754 28.375 1.00 70.12 N
ATOM 18 C4 C B2089 121.631 110.599 27.996 1.00 70.34 C
ATOM 19 N4 C B2089 122.079 109.357 27.811 1.00 71.42 N
ATOM 20 C5 C B2089 122.499 111.709 27.793 1.00 70.04 C
ATOM 21 C6 C B2089 121.998 112.932 28.000 1.00 68.82 C
ATOM 22 P A B2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 23 OP1 A B2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 24 OP2 A B2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 25 O5' A B2090 116.912 117.863 30.558 1.00 62.93 O
TER
ATOM 2 P A A2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 3 OP1 A A2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 4 OP2 A A2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 5 O5' A A2090 116.912 117.863 30.558 1.00 62.93 O
ATOM 6 C5' A A2090 116.043 117.480 29.473 1.00 61.46 C
ATOM 7 C4' A A2090 115.080 116.412 29.931 1.00 61.06 C
ATOM 8 O4' A A2090 115.832 115.240 30.340 1.00 61.27 O
ATOM 9 C3' A A2090 114.256 116.773 31.153 1.00 60.81 C
ATOM 10 O3' A A2090 113.099 117.518 30.789 1.00 60.98 O
ATOM 11 C2' A A2090 113.919 115.406 31.732 1.00 60.84 C
ATOM 12 O2' A A2090 112.887 114.749 31.024 1.00 60.87 O
ATOM 13 C1' A A2090 115.220 114.647 31.471 1.00 60.75 C
ATOM 14 N9 A A2090 116.185 114.661 32.574 1.00 61.44 N
ATOM 15 C8 A A2090 117.500 115.052 32.517 1.00 61.42 C
ATOM 16 N7 A A2090 118.153 114.885 33.640 1.00 62.20 N
ATOM 17 C5 A A2090 117.202 114.362 34.505 1.00 62.23 C
ATOM 18 C6 A A2090 117.271 113.946 35.846 1.00 61.80 C
ATOM 19 N6 A A2090 118.388 113.973 36.574 1.00 60.90 N
ATOM 20 N1 A A2090 116.140 113.485 36.418 1.00 61.91 N
ATOM 21 C2 A A2090 115.023 113.443 35.685 1.00 61.58 C
ATOM 22 N3 A A2090 114.834 113.793 34.415 1.00 62.94 N
ATOM 23 C4 A A2090 115.977 114.246 33.871 1.00 62.42 C
ATOM 24 P C A2091 112.776 118.900 31.544 1.00 61.30 P
ATOM 25 OP1 C A2091 111.388 119.280 31.184 1.00 60.03 O
ATOM 26 OP2 C A2091 113.884 119.851 31.281 1.00 61.64 O
ATOM 27 O5' C A2091 112.820 118.511 33.088 1.00 58.52 O
TER
ATOM 1 O3' U B2088 124.768 115.210 29.032 1.00 71.18 O
ATOM 2 P C B2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 3 OP1 C B2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 4 OP2 C B2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 5 O5' C B2089 122.926 116.217 27.734 1.00 69.53 O
ATOM 6 C5' C B2089 121.882 117.164 27.428 1.00 67.19 C
ATOM 7 C4' C B2089 120.548 116.645 27.928 1.00 65.38 C
ATOM 8 O4' C B2089 120.367 115.260 27.502 1.00 64.20 O
ATOM 9 C3' C B2089 120.391 116.620 29.447 1.00 64.76 C
ATOM 10 O3' C B2089 119.015 116.758 29.757 1.00 63.86 O
ATOM 11 C2' C B2089 120.802 115.200 29.793 1.00 63.79 C
ATOM 12 O2' C B2089 120.288 114.765 31.027 1.00 62.56 O
ATOM 13 C1' C B2089 120.156 114.446 28.639 1.00 65.35 C
ATOM 14 N1 C B2089 120.702 113.105 28.395 1.00 67.54 N
ATOM 15 C2 C B2089 119.865 111.992 28.583 1.00 69.48 C
ATOM 16 O2 C B2089 118.684 112.170 28.939 1.00 70.01 O
ATOM 17 N3 C B2089 120.361 110.754 28.375 1.00 70.12 N
ATOM 18 C4 C B2089 121.631 110.599 27.996 1.00 70.34 C
ATOM 19 N4 C B2089 122.079 109.357 27.811 1.00 71.42 N
ATOM 20 C5 C B2089 122.499 111.709 27.793 1.00 70.04 C
ATOM 21 C6 C B2089 121.998 112.932 28.000 1.00 68.82 C
ATOM 22 P A B2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 23 OP1 A B2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 24 OP2 A B2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 25 O5' A B2090 116.912 117.863 30.558 1.00 62.93 O
TER
Atoms:
OP1: (118.566,119.137,29.201)
OP2: (119.132,118.413,31.603)
C3': (114.256,116.773,31.153)
C1': (115.220,114.647,31.471)
C5': (116.043,117.480,29.473)
O4': (115.832,115.240,30.340)
C8: (117.500,115.052,32.517)
O2': (112.887,114.749,31.024)
C6: (117.271,113.946,35.846)
C5: (117.202,114.362,34.505)
C4: (115.977,114.246,33.871)
P: (118.459,118.150,30.306)
C4': (115.080,116.412,29.931)
C2': (113.919,115.406,31.732)
C2: (115.023,113.443,35.685)
N1: (116.140,113.485,36.418)
N3: (114.834,113.793,34.415)
N6: (118.388,113.973,36.574)
N7: (118.153,114.885,33.640)
N9: (116.185,114.661,32.574)
O5': (116.912,117.863,30.558)
O3': (113.099,117.518,30.789)
OP2: (119.132,118.413,31.603)
C3': (114.256,116.773,31.153)
C1': (115.220,114.647,31.471)
C5': (116.043,117.480,29.473)
O4': (115.832,115.240,30.340)
C8: (117.500,115.052,32.517)
O2': (112.887,114.749,31.024)
C6: (117.271,113.946,35.846)
C5: (117.202,114.362,34.505)
C4: (115.977,114.246,33.871)
P: (118.459,118.150,30.306)
C4': (115.080,116.412,29.931)
C2': (113.919,115.406,31.732)
C2: (115.023,113.443,35.685)
N1: (116.140,113.485,36.418)
N3: (114.834,113.793,34.415)
N6: (118.388,113.973,36.574)
N7: (118.153,114.885,33.640)
N9: (116.185,114.661,32.574)
O5': (116.912,117.863,30.558)
O3': (113.099,117.518,30.789)
C2: (119.865,111.992,28.583)
OP1: (125.234,117.097,27.460)
OP2: (123.955,117.522,29.628)
C4: (121.631,110.599,27.996)
O5': (122.926,116.217,27.734)
C3': (120.391,116.620,29.447)
C1': (120.156,114.446,28.639)
O4': (120.367,115.260,27.502)
C5': (121.882,117.164,27.428)
P: (124.272,116.636,28.481)
O2: (118.684,112.170,28.939)
C4': (120.548,116.645,27.928)
C2': (120.802,115.200,29.793)
O2': (120.288,114.765,31.027)
N1: (120.702,113.105,28.395)
N3: (120.361,110.754,28.375)
N4: (122.079,109.357,27.811)
C6: (121.998,112.932,28.000)
C5: (122.499,111.709,27.793)
O3': (119.015,116.758,29.757)
OP1: (125.234,117.097,27.460)
OP2: (123.955,117.522,29.628)
C4: (121.631,110.599,27.996)
O5': (122.926,116.217,27.734)
C3': (120.391,116.620,29.447)
C1': (120.156,114.446,28.639)
O4': (120.367,115.260,27.502)
C5': (121.882,117.164,27.428)
P: (124.272,116.636,28.481)
O2: (118.684,112.170,28.939)
C4': (120.548,116.645,27.928)
C2': (120.802,115.200,29.793)
O2': (120.288,114.765,31.027)
N1: (120.702,113.105,28.395)
N3: (120.361,110.754,28.375)
N4: (122.079,109.357,27.811)
C6: (121.998,112.932,28.000)
C5: (122.499,111.709,27.793)
O3': (119.015,116.758,29.757)
Image (generated by PyMOL):