ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNQ:D14:D13

Extra

PDB:
ATOM 1 O3' C A 13 -16.318 -9.468 7.960 1.00 38.37 O
ATOM 2 P A A 14 -16.180 -10.765 7.014 1.00 42.03 P
ATOM 3 OP1 A A 14 -16.363 -10.307 5.616 1.00 44.19 O
ATOM 4 OP2 A A 14 -17.051 -11.840 7.557 1.00 43.07 O
ATOM 5 O5' A A 14 -14.663 -11.203 7.210 1.00 41.70 O
ATOM 6 C5' A A 14 -13.680 -10.946 6.211 1.00 39.40 C
ATOM 7 C4' A A 14 -12.302 -11.134 6.795 1.00 38.45 C
ATOM 8 O4' A A 14 -11.957 -9.992 7.628 1.00 39.04 O
ATOM 9 C3' A A 14 -12.175 -12.340 7.708 1.00 39.97 C
ATOM 10 O3' A A 14 -11.848 -13.511 6.973 1.00 40.24 O
ATOM 11 C2' A A 14 -11.040 -11.927 8.632 1.00 39.56 C
ATOM 12 O2' A A 14 -9.785 -12.115 8.020 1.00 43.69 O
ATOM 13 C1' A A 14 -11.328 -10.435 8.818 1.00 38.67 C
ATOM 14 N9 A A 14 -12.224 -10.140 9.938 1.00 36.20 N
ATOM 15 C8 A A 14 -13.531 -9.732 9.872 1.00 39.11 C
ATOM 16 N7 A A 14 -14.087 -9.547 11.045 1.00 39.92 N
ATOM 17 C5 A A 14 -13.079 -9.857 11.944 1.00 34.01 C
ATOM 18 C6 A A 14 -13.035 -9.865 13.350 1.00 33.85 C
ATOM 19 N6 A A 14 -14.074 -9.540 14.128 1.00 31.17 N
ATOM 20 N1 A A 14 -11.876 -10.224 13.936 1.00 29.11 N
ATOM 21 C2 A A 14 -10.840 -10.554 13.159 1.00 31.98 C
ATOM 22 N3 A A 14 -10.759 -10.589 11.831 1.00 37.05 N
ATOM 23 C4 A A 14 -11.925 -10.221 11.277 1.00 34.25 C
ATOM 24 P A A 15 -12.477 -14.921 7.415 1.00 41.37 P
ATOM 25 OP1 A A 15 -12.009 -15.921 6.422 1.00 44.31 O
ATOM 26 OP2 A A 15 -13.934 -14.740 7.649 1.00 39.08 O
ATOM 27 O5' A A 15 -11.779 -15.232 8.814 1.00 41.60 O
TER

ATOM 1 O3' G B 12 -21.299 -6.812 5.207 1.00 39.73 O
ATOM 2 P C B 13 -20.459 -8.185 5.152 1.00 44.26 P
ATOM 3 OP1 C B 13 -19.503 -8.061 4.015 1.00 45.68 O
ATOM 4 OP2 C B 13 -21.407 -9.321 5.195 1.00 44.38 O
ATOM 5 O5' C B 13 -19.622 -8.224 6.513 1.00 42.87 O
ATOM 6 C5' C B 13 -18.475 -7.397 6.706 1.00 34.08 C
ATOM 7 C4' C B 13 -17.881 -7.634 8.081 1.00 33.76 C
ATOM 8 O4' C B 13 -18.790 -7.161 9.115 1.00 32.35 O
ATOM 9 C3' C B 13 -17.593 -9.083 8.455 1.00 33.35 C
ATOM 10 O3' C B 13 -16.318 -9.468 7.960 1.00 38.37 O
ATOM 11 C2' C B 13 -17.585 -9.012 9.981 1.00 35.01 C
ATOM 12 O2' C B 13 -16.384 -8.449 10.486 1.00 34.98 O
ATOM 13 C1' C B 13 -18.725 -8.025 10.238 1.00 30.00 C
ATOM 14 N1 C B 13 -20.049 -8.633 10.437 1.00 34.55 N
ATOM 15 C2 C B 13 -20.411 -9.062 11.727 1.00 35.41 C
ATOM 16 O2 C B 13 -19.589 -8.944 12.656 1.00 34.57 O
ATOM 17 N3 C B 13 -21.643 -9.584 11.929 1.00 33.73 N
ATOM 18 C4 C B 13 -22.501 -9.677 10.912 1.00 38.69 C
ATOM 19 N4 C B 13 -23.722 -10.160 11.169 1.00 37.16 N
ATOM 20 C5 C B 13 -22.151 -9.269 9.586 1.00 36.56 C
ATOM 21 C6 C B 13 -20.926 -8.763 9.396 1.00 36.07 C
ATOM 22 P A B 14 -16.180 -10.765 7.014 1.00 42.03 P
ATOM 23 OP1 A B 14 -16.363 -10.307 5.616 1.00 44.19 O
ATOM 24 OP2 A B 14 -17.051 -11.840 7.557 1.00 43.07 O
ATOM 25 O5' A B 14 -14.663 -11.203 7.210 1.00 41.70 O
TER

Atoms:
OP1: (-16.363,-10.307,5.616)
OP2: (-17.051,-11.840,7.557)
C3': (-12.175,-12.340,7.708)
C1': (-11.328,-10.435,8.818)
C5': (-13.680,-10.946,6.211)
O4': (-11.957,-9.992,7.628)
C8: (-13.531,-9.732,9.872)
O2': (-9.785,-12.115,8.020)
C6: (-13.035,-9.865,13.350)
C5: (-13.079,-9.857,11.944)
C4: (-11.925,-10.221,11.277)
P: (-16.180,-10.765,7.014)
C4': (-12.302,-11.134,6.795)
C2': (-11.040,-11.927,8.632)
C2: (-10.840,-10.554,13.159)
N1: (-11.876,-10.224,13.936)
N3: (-10.759,-10.589,11.831)
N6: (-14.074,-9.540,14.128)
N7: (-14.087,-9.547,11.045)
N9: (-12.224,-10.140,9.938)
O5': (-14.663,-11.203,7.210)
O3': (-11.848,-13.511,6.973)
C2: (-20.411,-9.062,11.727)
OP1: (-19.503,-8.061,4.015)
OP2: (-21.407,-9.321,5.195)
C4: (-22.501,-9.677,10.912)
O5': (-19.622,-8.224,6.513)
C3': (-17.593,-9.083,8.455)
C1': (-18.725,-8.025,10.238)
O4': (-18.790,-7.161,9.115)
C5': (-18.475,-7.397,6.706)
P: (-20.459,-8.185,5.152)
O2: (-19.589,-8.944,12.656)
C4': (-17.881,-7.634,8.081)
C2': (-17.585,-9.012,9.981)
O2': (-16.384,-8.449,10.486)
N1: (-20.049,-8.633,10.437)
N3: (-21.643,-9.584,11.929)
N4: (-23.722,-10.160,11.169)
C6: (-20.926,-8.763,9.396)
C5: (-22.151,-9.269,9.586)
O3': (-16.318,-9.468,7.960)
Image (generated by PyMOL):
PyMOL image
show in jmol