Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02090:02089
Extra
PDB:
ATOM 1 O3' C A2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 2 P A A2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 3 OP1 A A2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 4 OP2 A A2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 5 O5' A A2090 117.276 118.130 30.977 1.00 80.95 O
ATOM 6 C5' A A2090 116.385 117.807 29.888 1.00 79.02 C
ATOM 7 C4' A A2090 115.425 116.722 30.312 1.00 77.77 C
ATOM 8 O4' A A2090 116.188 115.555 30.713 1.00 77.73 O
ATOM 9 C3' A A2090 114.577 117.054 31.528 1.00 76.98 C
ATOM 10 O3' A A2090 113.413 117.782 31.148 1.00 76.57 O
ATOM 11 C2' A A2090 114.255 115.673 32.084 1.00 76.74 C
ATOM 12 O2' A A2090 113.247 115.003 31.354 1.00 76.17 O
ATOM 13 C1' A A2090 115.571 114.938 31.830 1.00 77.04 C
ATOM 14 N9 A A2090 116.522 114.949 32.945 1.00 77.58 N
ATOM 15 C8 A A2090 117.833 115.357 32.916 1.00 77.51 C
ATOM 16 N7 A A2090 118.466 115.184 34.050 1.00 78.57 N
ATOM 17 C5 A A2090 117.506 114.639 34.891 1.00 79.05 C
ATOM 18 C6 A A2090 117.549 114.211 36.238 1.00 78.92 C
ATOM 19 N6 A A2090 118.646 114.253 37.002 1.00 79.36 N
ATOM 20 N1 A A2090 116.414 113.730 36.777 1.00 77.75 N
ATOM 21 C2 A A2090 115.317 113.678 36.016 1.00 78.35 C
ATOM 22 N3 A A2090 115.151 114.036 34.744 1.00 78.80 N
ATOM 23 C4 A A2090 116.297 114.511 34.230 1.00 78.41 C
ATOM 24 P C A2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 25 OP1 C A2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 26 OP2 C A2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 27 O5' C A2091 113.041 118.820 33.422 1.00 74.17 O
TER
ATOM 1 O3' U B2088 125.156 115.551 29.409 1.00 89.81 O
ATOM 2 P C B2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C B2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C B2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C B2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C B2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C B2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C B2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C B2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C B2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C B2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C B2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C B2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C B2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C B2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C B2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C B2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C B2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C B2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C B2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
TER
ATOM 2 P A A2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 3 OP1 A A2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 4 OP2 A A2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 5 O5' A A2090 117.276 118.130 30.977 1.00 80.95 O
ATOM 6 C5' A A2090 116.385 117.807 29.888 1.00 79.02 C
ATOM 7 C4' A A2090 115.425 116.722 30.312 1.00 77.77 C
ATOM 8 O4' A A2090 116.188 115.555 30.713 1.00 77.73 O
ATOM 9 C3' A A2090 114.577 117.054 31.528 1.00 76.98 C
ATOM 10 O3' A A2090 113.413 117.782 31.148 1.00 76.57 O
ATOM 11 C2' A A2090 114.255 115.673 32.084 1.00 76.74 C
ATOM 12 O2' A A2090 113.247 115.003 31.354 1.00 76.17 O
ATOM 13 C1' A A2090 115.571 114.938 31.830 1.00 77.04 C
ATOM 14 N9 A A2090 116.522 114.949 32.945 1.00 77.58 N
ATOM 15 C8 A A2090 117.833 115.357 32.916 1.00 77.51 C
ATOM 16 N7 A A2090 118.466 115.184 34.050 1.00 78.57 N
ATOM 17 C5 A A2090 117.506 114.639 34.891 1.00 79.05 C
ATOM 18 C6 A A2090 117.549 114.211 36.238 1.00 78.92 C
ATOM 19 N6 A A2090 118.646 114.253 37.002 1.00 79.36 N
ATOM 20 N1 A A2090 116.414 113.730 36.777 1.00 77.75 N
ATOM 21 C2 A A2090 115.317 113.678 36.016 1.00 78.35 C
ATOM 22 N3 A A2090 115.151 114.036 34.744 1.00 78.80 N
ATOM 23 C4 A A2090 116.297 114.511 34.230 1.00 78.41 C
ATOM 24 P C A2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 25 OP1 C A2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 26 OP2 C A2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 27 O5' C A2091 113.041 118.820 33.422 1.00 74.17 O
TER
ATOM 1 O3' U B2088 125.156 115.551 29.409 1.00 89.81 O
ATOM 2 P C B2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C B2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C B2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C B2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C B2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C B2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C B2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C B2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C B2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C B2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C B2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C B2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C B2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C B2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C B2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C B2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C B2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C B2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C B2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
TER
Atoms:
OP1: (118.847,119.529,29.687)
OP2: (119.534,118.604,31.994)
C3': (114.577,117.054,31.528)
C1': (115.571,114.938,31.830)
C5': (116.385,117.807,29.888)
O4': (116.188,115.555,30.713)
C8: (117.833,115.357,32.916)
O2': (113.247,115.003,31.354)
C6: (117.549,114.211,36.238)
C5: (117.506,114.639,34.891)
C4: (116.297,114.511,34.230)
P: (118.812,118.445,30.704)
C4': (115.425,116.722,30.312)
C2': (114.255,115.673,32.084)
C2: (115.317,113.678,36.016)
N1: (116.414,113.730,36.777)
N3: (115.151,114.036,34.744)
N6: (118.646,114.253,37.002)
N7: (118.466,115.184,34.050)
N9: (116.522,114.949,32.945)
O5': (117.276,118.130,30.977)
O3': (113.413,117.782,31.148)
OP2: (119.534,118.604,31.994)
C3': (114.577,117.054,31.528)
C1': (115.571,114.938,31.830)
C5': (116.385,117.807,29.888)
O4': (116.188,115.555,30.713)
C8: (117.833,115.357,32.916)
O2': (113.247,115.003,31.354)
C6: (117.549,114.211,36.238)
C5: (117.506,114.639,34.891)
C4: (116.297,114.511,34.230)
P: (118.812,118.445,30.704)
C4': (115.425,116.722,30.312)
C2': (114.255,115.673,32.084)
C2: (115.317,113.678,36.016)
N1: (116.414,113.730,36.777)
N3: (115.151,114.036,34.744)
N6: (118.646,114.253,37.002)
N7: (118.466,115.184,34.050)
N9: (116.522,114.949,32.945)
O5': (117.276,118.130,30.977)
O3': (113.413,117.782,31.148)
C2: (120.062,112.340,28.990)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
Image (generated by PyMOL):