ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:A45:A11

Extra

PDB:
ATOM 1 O3' A A 44 -13.179 16.632 65.359 1.00 71.13 O
ATOM 2 P A A 45 -13.171 16.646 66.961 1.00 72.38 P
ATOM 3 OP1 A A 45 -13.939 15.447 67.395 1.00 70.63 O
ATOM 4 OP2 A A 45 -13.583 17.997 67.434 1.00 71.11 O
ATOM 5 O5' A A 45 -11.638 16.438 67.330 1.00 71.76 O
ATOM 6 C5' A A 45 -10.956 15.253 66.964 1.00 72.17 C
ATOM 7 C4' A A 45 -9.555 15.292 67.496 1.00 73.44 C
ATOM 8 O4' A A 45 -8.795 16.246 66.714 1.00 73.28 O
ATOM 9 C3' A A 45 -9.434 15.830 68.910 1.00 75.50 C
ATOM 10 O3' A A 45 -9.700 14.831 69.883 1.00 77.29 O
ATOM 11 C2' A A 45 -7.983 16.299 68.952 1.00 75.60 C
ATOM 12 O2' A A 45 -7.045 15.278 69.248 1.00 76.78 O
ATOM 13 C1' A A 45 -7.798 16.844 67.532 1.00 73.77 C
ATOM 14 N9 A A 45 -7.983 18.292 67.495 1.00 71.50 N
ATOM 15 C8 A A 45 -9.087 18.996 67.092 1.00 71.76 C
ATOM 16 N7 A A 45 -8.961 20.295 67.217 1.00 70.99 N
ATOM 17 C5 A A 45 -7.685 20.455 67.732 1.00 70.34 C
ATOM 18 C6 A A 45 -6.954 21.589 68.100 1.00 69.89 C
ATOM 19 N6 A A 45 -7.423 22.831 68.011 1.00 69.62 N
ATOM 20 N1 A A 45 -5.708 21.403 68.574 1.00 70.07 N
ATOM 21 C2 A A 45 -5.240 20.156 68.673 1.00 70.11 C
ATOM 22 N3 A A 45 -5.832 19.010 68.365 1.00 70.30 N
ATOM 23 C4 A A 45 -7.068 19.231 67.896 1.00 70.59 C
ATOM 24 P A A 46 -10.668 15.174 71.117 1.00 79.69 P
ATOM 25 OP1 A A 46 -10.647 14.026 72.061 1.00 79.57 O
ATOM 26 OP2 A A 46 -11.959 15.634 70.546 1.00 78.48 O
ATOM 27 O5' A A 46 -9.939 16.386 71.851 1.00 79.12 O
TER

ATOM 1 O3' U B 10 -16.953 26.967 64.437 1.00 63.21 O
ATOM 2 P U B 11 -17.085 26.618 65.999 1.00 66.40 P
ATOM 3 OP1 U B 11 -18.527 26.661 66.331 1.00 68.45 O
ATOM 4 OP2 U B 11 -16.143 27.477 66.754 1.00 66.07 O
ATOM 5 O5' U B 11 -16.586 25.107 66.094 1.00 65.97 O
ATOM 6 C5' U B 11 -17.182 24.093 65.296 1.00 67.36 C
ATOM 7 C4' U B 11 -16.479 22.772 65.505 1.00 69.81 C
ATOM 8 O4' U B 11 -15.173 22.795 64.879 1.00 70.39 O
ATOM 9 C3' U B 11 -16.158 22.402 66.939 1.00 70.69 C
ATOM 10 O3' U B 11 -17.305 21.860 67.579 1.00 72.76 O
ATOM 11 C2' U B 11 -15.089 21.334 66.747 1.00 70.55 C
ATOM 12 O2' U B 11 -15.628 20.071 66.444 1.00 71.94 O
ATOM 13 C1' U B 11 -14.329 21.861 65.529 1.00 69.88 C
ATOM 14 N1 U B 11 -13.093 22.547 65.926 1.00 70.58 N
ATOM 15 C2 U B 11 -12.019 21.765 66.322 1.00 70.85 C
ATOM 16 O2 U B 11 -12.042 20.550 66.310 1.00 72.51 O
ATOM 17 N3 U B 11 -10.916 22.462 66.734 1.00 69.65 N
ATOM 18 C4 U B 11 -10.779 23.828 66.789 1.00 70.03 C
ATOM 19 O4 U B 11 -9.773 24.304 67.296 1.00 70.62 O
ATOM 20 C5 U B 11 -11.917 24.566 66.335 1.00 70.95 C
ATOM 21 C6 U B 11 -13.009 23.915 65.928 1.00 70.52 C
ATOM 22 P A B 12 -17.510 22.068 69.158 1.00 74.36 P
ATOM 23 OP1 A B 12 -18.547 21.100 69.565 1.00 73.45 O
ATOM 24 OP2 A B 12 -17.701 23.513 69.441 1.00 72.68 O
ATOM 25 O5' A B 12 -16.133 21.590 69.797 1.00 76.15 O
TER

Atoms:
OP1: (-13.939,15.447,67.395)
OP2: (-13.583,17.997,67.434)
C3': (-9.434,15.830,68.910)
C1': (-7.798,16.844,67.532)
C5': (-10.956,15.253,66.964)
O4': (-8.795,16.246,66.714)
C8: (-9.087,18.996,67.092)
O2': (-7.045,15.278,69.248)
C6: (-6.954,21.589,68.100)
C5: (-7.685,20.455,67.732)
C4: (-7.068,19.231,67.896)
P: (-13.171,16.646,66.961)
C4': (-9.555,15.292,67.496)
C2': (-7.983,16.299,68.952)
C2: (-5.240,20.156,68.673)
N1: (-5.708,21.403,68.574)
N3: (-5.832,19.010,68.365)
N6: (-7.423,22.831,68.011)
N7: (-8.961,20.295,67.217)
N9: (-7.983,18.292,67.495)
O5': (-11.638,16.438,67.330)
O3': (-9.700,14.831,69.883)
C4: (-10.779,23.828,66.789)
N3: (-10.916,22.462,66.734)
OP1: (-18.527,26.661,66.331)
OP2: (-16.143,27.477,66.754)
C2: (-12.019,21.765,66.322)
C1': (-14.329,21.861,65.529)
C3': (-16.158,22.402,66.939)
O5': (-16.586,25.107,66.094)
O4': (-15.173,22.795,64.879)
C5': (-17.182,24.093,65.296)
P: (-17.085,26.618,65.999)
C4': (-16.479,22.772,65.505)
C2': (-15.089,21.334,66.747)
O2': (-15.628,20.071,66.444)
N1: (-13.093,22.547,65.926)
O4: (-9.773,24.304,67.296)
O2: (-12.042,20.550,66.310)
C6: (-13.009,23.915,65.928)
C5: (-11.917,24.566,66.335)
O3': (-17.305,21.860,67.579)
Image (generated by PyMOL):
PyMOL image
show in jmol