Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02090:02089
Extra
PDB:
ATOM 1 O3' C A2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 2 P A A2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 3 OP1 A A2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 4 OP2 A A2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 5 O5' A A2090 116.919 118.041 30.513 1.00 67.67 O
ATOM 6 C5' A A2090 116.052 117.605 29.442 1.00 64.61 C
ATOM 7 C4' A A2090 115.109 116.521 29.924 1.00 62.52 C
ATOM 8 O4' A A2090 115.871 115.356 30.331 1.00 62.59 O
ATOM 9 C3' A A2090 114.270 116.855 31.142 1.00 60.93 C
ATOM 10 O3' A A2090 113.116 117.599 30.780 1.00 60.54 O
ATOM 11 C2' A A2090 113.928 115.472 31.680 1.00 60.64 C
ATOM 12 O2' A A2090 112.927 114.812 30.934 1.00 58.59 O
ATOM 13 C1' A A2090 115.238 114.730 31.434 1.00 61.12 C
ATOM 14 N9 A A2090 116.170 114.731 32.564 1.00 62.72 N
ATOM 15 C8 A A2090 117.503 115.066 32.540 1.00 62.75 C
ATOM 16 N7 A A2090 118.113 114.894 33.687 1.00 63.39 N
ATOM 17 C5 A A2090 117.114 114.428 34.531 1.00 63.43 C
ATOM 18 C6 A A2090 117.124 114.037 35.880 1.00 62.63 C
ATOM 19 N6 A A2090 118.223 114.020 36.637 1.00 63.92 N
ATOM 20 N1 A A2090 115.956 113.648 36.430 1.00 61.29 N
ATOM 21 C2 A A2090 114.863 113.638 35.665 1.00 61.70 C
ATOM 22 N3 A A2090 114.728 113.961 34.380 1.00 63.47 N
ATOM 23 C4 A A2090 115.906 114.352 33.863 1.00 63.55 C
ATOM 24 P C A2091 112.811 119.001 31.507 1.00 60.95 P
ATOM 25 OP1 C A2091 111.433 119.389 31.108 1.00 59.06 O
ATOM 26 OP2 C A2091 113.941 119.927 31.242 1.00 61.99 O
ATOM 27 O5' C A2091 112.825 118.657 33.063 1.00 58.87 O
TER
ATOM 1 O3' U B2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 2 P C B2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 3 OP1 C B2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 4 OP2 C B2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 5 O5' C B2089 122.888 116.274 27.863 1.00 72.30 O
ATOM 6 C5' C B2089 121.868 117.235 27.540 1.00 70.52 C
ATOM 7 C4' C B2089 120.535 116.757 28.071 1.00 69.40 C
ATOM 8 O4' C B2089 120.326 115.379 27.641 1.00 67.89 O
ATOM 9 C3' C B2089 120.426 116.728 29.596 1.00 68.40 C
ATOM 10 O3' C B2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 11 C2' C B2089 120.818 115.297 29.918 1.00 67.73 C
ATOM 12 O2' C B2089 120.324 114.864 31.160 1.00 67.28 O
ATOM 13 C1' C B2089 120.124 114.565 28.777 1.00 68.99 C
ATOM 14 N1 C B2089 120.629 113.213 28.509 1.00 70.78 N
ATOM 15 C2 C B2089 119.762 112.116 28.688 1.00 72.57 C
ATOM 16 O2 C B2089 118.581 112.318 29.037 1.00 72.06 O
ATOM 17 N3 C B2089 120.232 110.868 28.474 1.00 73.38 N
ATOM 18 C4 C B2089 121.500 110.689 28.094 1.00 73.53 C
ATOM 19 N4 C B2089 121.926 109.440 27.911 1.00 74.08 N
ATOM 20 C5 C B2089 122.390 111.783 27.888 1.00 73.61 C
ATOM 21 C6 C B2089 121.918 113.014 28.104 1.00 72.15 C
ATOM 22 P A B2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 23 OP1 A B2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 24 OP2 A B2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 25 O5' A B2090 116.919 118.041 30.513 1.00 67.67 O
TER
ATOM 2 P A A2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 3 OP1 A A2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 4 OP2 A A2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 5 O5' A A2090 116.919 118.041 30.513 1.00 67.67 O
ATOM 6 C5' A A2090 116.052 117.605 29.442 1.00 64.61 C
ATOM 7 C4' A A2090 115.109 116.521 29.924 1.00 62.52 C
ATOM 8 O4' A A2090 115.871 115.356 30.331 1.00 62.59 O
ATOM 9 C3' A A2090 114.270 116.855 31.142 1.00 60.93 C
ATOM 10 O3' A A2090 113.116 117.599 30.780 1.00 60.54 O
ATOM 11 C2' A A2090 113.928 115.472 31.680 1.00 60.64 C
ATOM 12 O2' A A2090 112.927 114.812 30.934 1.00 58.59 O
ATOM 13 C1' A A2090 115.238 114.730 31.434 1.00 61.12 C
ATOM 14 N9 A A2090 116.170 114.731 32.564 1.00 62.72 N
ATOM 15 C8 A A2090 117.503 115.066 32.540 1.00 62.75 C
ATOM 16 N7 A A2090 118.113 114.894 33.687 1.00 63.39 N
ATOM 17 C5 A A2090 117.114 114.428 34.531 1.00 63.43 C
ATOM 18 C6 A A2090 117.124 114.037 35.880 1.00 62.63 C
ATOM 19 N6 A A2090 118.223 114.020 36.637 1.00 63.92 N
ATOM 20 N1 A A2090 115.956 113.648 36.430 1.00 61.29 N
ATOM 21 C2 A A2090 114.863 113.638 35.665 1.00 61.70 C
ATOM 22 N3 A A2090 114.728 113.961 34.380 1.00 63.47 N
ATOM 23 C4 A A2090 115.906 114.352 33.863 1.00 63.55 C
ATOM 24 P C A2091 112.811 119.001 31.507 1.00 60.95 P
ATOM 25 OP1 C A2091 111.433 119.389 31.108 1.00 59.06 O
ATOM 26 OP2 C A2091 113.941 119.927 31.242 1.00 61.99 O
ATOM 27 O5' C A2091 112.825 118.657 33.063 1.00 58.87 O
TER
ATOM 1 O3' U B2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 2 P C B2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 3 OP1 C B2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 4 OP2 C B2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 5 O5' C B2089 122.888 116.274 27.863 1.00 72.30 O
ATOM 6 C5' C B2089 121.868 117.235 27.540 1.00 70.52 C
ATOM 7 C4' C B2089 120.535 116.757 28.071 1.00 69.40 C
ATOM 8 O4' C B2089 120.326 115.379 27.641 1.00 67.89 O
ATOM 9 C3' C B2089 120.426 116.728 29.596 1.00 68.40 C
ATOM 10 O3' C B2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 11 C2' C B2089 120.818 115.297 29.918 1.00 67.73 C
ATOM 12 O2' C B2089 120.324 114.864 31.160 1.00 67.28 O
ATOM 13 C1' C B2089 120.124 114.565 28.777 1.00 68.99 C
ATOM 14 N1 C B2089 120.629 113.213 28.509 1.00 70.78 N
ATOM 15 C2 C B2089 119.762 112.116 28.688 1.00 72.57 C
ATOM 16 O2 C B2089 118.581 112.318 29.037 1.00 72.06 O
ATOM 17 N3 C B2089 120.232 110.868 28.474 1.00 73.38 N
ATOM 18 C4 C B2089 121.500 110.689 28.094 1.00 73.53 C
ATOM 19 N4 C B2089 121.926 109.440 27.911 1.00 74.08 N
ATOM 20 C5 C B2089 122.390 111.783 27.888 1.00 73.61 C
ATOM 21 C6 C B2089 121.918 113.014 28.104 1.00 72.15 C
ATOM 22 P A B2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 23 OP1 A B2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 24 OP2 A B2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 25 O5' A B2090 116.919 118.041 30.513 1.00 67.67 O
TER
Atoms:
OP1: (118.576,119.103,28.982)
OP2: (119.085,118.854,31.494)
C3': (114.270,116.855,31.142)
C1': (115.238,114.730,31.434)
C5': (116.052,117.605,29.442)
O4': (115.871,115.356,30.331)
C8: (117.503,115.066,32.540)
O2': (112.927,114.812,30.934)
C6: (117.124,114.037,35.880)
C5: (117.114,114.428,34.531)
C4: (115.906,114.352,33.863)
P: (118.465,118.330,30.247)
C4': (115.109,116.521,29.924)
C2': (113.928,115.472,31.680)
C2: (114.863,113.638,35.665)
N1: (115.956,113.648,36.430)
N3: (114.728,113.961,34.380)
N6: (118.223,114.020,36.637)
N7: (118.113,114.894,33.687)
N9: (116.170,114.731,32.564)
O5': (116.919,118.041,30.513)
O3': (113.116,117.599,30.780)
OP2: (119.085,118.854,31.494)
C3': (114.270,116.855,31.142)
C1': (115.238,114.730,31.434)
C5': (116.052,117.605,29.442)
O4': (115.871,115.356,30.331)
C8: (117.503,115.066,32.540)
O2': (112.927,114.812,30.934)
C6: (117.124,114.037,35.880)
C5: (117.114,114.428,34.531)
C4: (115.906,114.352,33.863)
P: (118.465,118.330,30.247)
C4': (115.109,116.521,29.924)
C2': (113.928,115.472,31.680)
C2: (114.863,113.638,35.665)
N1: (115.956,113.648,36.430)
N3: (114.728,113.961,34.380)
N6: (118.223,114.020,36.637)
N7: (118.113,114.894,33.687)
N9: (116.170,114.731,32.564)
O5': (116.919,118.041,30.513)
O3': (113.116,117.599,30.780)
C2: (119.762,112.116,28.688)
OP1: (125.138,117.184,27.367)
OP2: (124.075,117.576,29.655)
C4: (121.500,110.689,28.094)
O5': (122.888,116.274,27.863)
C3': (120.426,116.728,29.596)
C1': (120.124,114.565,28.777)
O4': (120.326,115.379,27.641)
C5': (121.868,117.235,27.540)
P: (124.294,116.701,28.479)
O2: (118.581,112.318,29.037)
C4': (120.535,116.757,28.071)
C2': (120.818,115.297,29.918)
O2': (120.324,114.864,31.160)
N1: (120.629,113.213,28.509)
N3: (120.232,110.868,28.474)
N4: (121.926,109.440,27.911)
C6: (121.918,113.014,28.104)
C5: (122.390,111.783,27.888)
O3': (119.066,116.876,29.968)
OP1: (125.138,117.184,27.367)
OP2: (124.075,117.576,29.655)
C4: (121.500,110.689,28.094)
O5': (122.888,116.274,27.863)
C3': (120.426,116.728,29.596)
C1': (120.124,114.565,28.777)
O4': (120.326,115.379,27.641)
C5': (121.868,117.235,27.540)
P: (124.294,116.701,28.479)
O2: (118.581,112.318,29.037)
C4': (120.535,116.757,28.071)
C2': (120.818,115.297,29.918)
O2': (120.324,114.864,31.160)
N1: (120.629,113.213,28.509)
N3: (120.232,110.868,28.474)
N4: (121.926,109.440,27.911)
C6: (121.918,113.014,28.104)
C5: (122.390,111.783,27.888)
O3': (119.066,116.876,29.968)
Image (generated by PyMOL):