Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNR:D5:D4
Extra
PDB:
ATOM 1 O3' C A 4 -22.472 9.551 24.979 1.00 26.97 O
ATOM 2 P A A 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 3 OP1 A A 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 4 OP2 A A 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 5 O5' A A 5 -22.126 7.151 25.586 1.00 28.93 O
ATOM 6 C5' A A 5 -20.733 7.051 25.918 1.00 29.39 C
ATOM 7 C4' A A 5 -20.571 6.619 27.358 1.00 29.30 C
ATOM 8 O4' A A 5 -20.875 7.725 28.252 1.00 27.89 O
ATOM 9 C3' A A 5 -21.465 5.468 27.789 1.00 26.10 C
ATOM 10 O3' A A 5 -20.775 4.240 27.614 1.00 27.51 O
ATOM 11 C2' A A 5 -21.724 5.773 29.263 1.00 28.72 C
ATOM 12 O2' A A 5 -20.699 5.335 30.133 1.00 25.25 O
ATOM 13 C1' A A 5 -21.775 7.299 29.256 1.00 28.57 C
ATOM 14 N9 A A 5 -23.086 7.850 28.931 1.00 28.92 N
ATOM 15 C8 A A 5 -23.356 8.729 27.917 1.00 30.20 C
ATOM 16 N7 A A 5 -24.610 9.083 27.844 1.00 32.39 N
ATOM 17 C5 A A 5 -25.213 8.389 28.881 1.00 31.06 C
ATOM 18 C6 A A 5 -26.534 8.349 29.334 1.00 32.23 C
ATOM 19 N6 A A 5 -27.520 9.056 28.782 1.00 33.66 N
ATOM 20 N1 A A 5 -26.812 7.554 30.391 1.00 30.70 N
ATOM 21 C2 A A 5 -25.812 6.861 30.949 1.00 30.62 C
ATOM 22 N3 A A 5 -24.524 6.825 30.615 1.00 31.09 N
ATOM 23 C4 A A 5 -24.287 7.621 29.557 1.00 30.16 C
ATOM 24 P C A 6 -21.442 3.067 26.736 1.00 27.76 P
ATOM 25 OP1 C A 6 -20.444 1.970 26.712 1.00 30.83 O
ATOM 26 OP2 C A 6 -21.932 3.635 25.463 1.00 29.16 O
ATOM 27 O5' C A 6 -22.724 2.633 27.570 1.00 24.44 O
TER
ATOM 1 O3' U B 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 2 P C B 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 3 OP1 C B 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 4 OP2 C B 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 5 O5' C B 4 -20.583 11.238 22.171 1.00 27.27 O
ATOM 6 C5' C B 4 -20.233 11.346 23.546 1.00 26.58 C
ATOM 7 C4' C B 4 -21.469 11.627 24.372 1.00 24.84 C
ATOM 8 O4' C B 4 -21.988 12.934 24.034 1.00 25.90 O
ATOM 9 C3' C B 4 -22.627 10.677 24.131 1.00 24.80 C
ATOM 10 O3' C B 4 -22.472 9.551 24.979 1.00 26.97 O
ATOM 11 C2' C B 4 -23.847 11.516 24.517 1.00 23.71 C
ATOM 12 O2' C B 4 -24.154 11.489 25.898 1.00 20.07 O
ATOM 13 C1' C B 4 -23.402 12.927 24.130 1.00 24.82 C
ATOM 14 N1 C B 4 -23.963 13.411 22.857 1.00 24.54 N
ATOM 15 C2 C B 4 -25.213 14.032 22.873 1.00 23.85 C
ATOM 16 O2 C B 4 -25.815 14.123 23.949 1.00 23.18 O
ATOM 17 N3 C B 4 -25.735 14.511 21.716 1.00 22.76 N
ATOM 18 C4 C B 4 -25.059 14.374 20.575 1.00 24.45 C
ATOM 19 N4 C B 4 -25.609 14.861 19.456 1.00 24.14 N
ATOM 20 C5 C B 4 -23.785 13.732 20.526 1.00 23.65 C
ATOM 21 C6 C B 4 -23.280 13.267 21.681 1.00 23.28 C
ATOM 22 P A B 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 23 OP1 A B 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 24 OP2 A B 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 25 O5' A B 5 -22.126 7.151 25.586 1.00 28.93 O
TER
ATOM 2 P A A 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 3 OP1 A A 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 4 OP2 A A 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 5 O5' A A 5 -22.126 7.151 25.586 1.00 28.93 O
ATOM 6 C5' A A 5 -20.733 7.051 25.918 1.00 29.39 C
ATOM 7 C4' A A 5 -20.571 6.619 27.358 1.00 29.30 C
ATOM 8 O4' A A 5 -20.875 7.725 28.252 1.00 27.89 O
ATOM 9 C3' A A 5 -21.465 5.468 27.789 1.00 26.10 C
ATOM 10 O3' A A 5 -20.775 4.240 27.614 1.00 27.51 O
ATOM 11 C2' A A 5 -21.724 5.773 29.263 1.00 28.72 C
ATOM 12 O2' A A 5 -20.699 5.335 30.133 1.00 25.25 O
ATOM 13 C1' A A 5 -21.775 7.299 29.256 1.00 28.57 C
ATOM 14 N9 A A 5 -23.086 7.850 28.931 1.00 28.92 N
ATOM 15 C8 A A 5 -23.356 8.729 27.917 1.00 30.20 C
ATOM 16 N7 A A 5 -24.610 9.083 27.844 1.00 32.39 N
ATOM 17 C5 A A 5 -25.213 8.389 28.881 1.00 31.06 C
ATOM 18 C6 A A 5 -26.534 8.349 29.334 1.00 32.23 C
ATOM 19 N6 A A 5 -27.520 9.056 28.782 1.00 33.66 N
ATOM 20 N1 A A 5 -26.812 7.554 30.391 1.00 30.70 N
ATOM 21 C2 A A 5 -25.812 6.861 30.949 1.00 30.62 C
ATOM 22 N3 A A 5 -24.524 6.825 30.615 1.00 31.09 N
ATOM 23 C4 A A 5 -24.287 7.621 29.557 1.00 30.16 C
ATOM 24 P C A 6 -21.442 3.067 26.736 1.00 27.76 P
ATOM 25 OP1 C A 6 -20.444 1.970 26.712 1.00 30.83 O
ATOM 26 OP2 C A 6 -21.932 3.635 25.463 1.00 29.16 O
ATOM 27 O5' C A 6 -22.724 2.633 27.570 1.00 24.44 O
TER
ATOM 1 O3' U B 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 2 P C B 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 3 OP1 C B 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 4 OP2 C B 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 5 O5' C B 4 -20.583 11.238 22.171 1.00 27.27 O
ATOM 6 C5' C B 4 -20.233 11.346 23.546 1.00 26.58 C
ATOM 7 C4' C B 4 -21.469 11.627 24.372 1.00 24.84 C
ATOM 8 O4' C B 4 -21.988 12.934 24.034 1.00 25.90 O
ATOM 9 C3' C B 4 -22.627 10.677 24.131 1.00 24.80 C
ATOM 10 O3' C B 4 -22.472 9.551 24.979 1.00 26.97 O
ATOM 11 C2' C B 4 -23.847 11.516 24.517 1.00 23.71 C
ATOM 12 O2' C B 4 -24.154 11.489 25.898 1.00 20.07 O
ATOM 13 C1' C B 4 -23.402 12.927 24.130 1.00 24.82 C
ATOM 14 N1 C B 4 -23.963 13.411 22.857 1.00 24.54 N
ATOM 15 C2 C B 4 -25.213 14.032 22.873 1.00 23.85 C
ATOM 16 O2 C B 4 -25.815 14.123 23.949 1.00 23.18 O
ATOM 17 N3 C B 4 -25.735 14.511 21.716 1.00 22.76 N
ATOM 18 C4 C B 4 -25.059 14.374 20.575 1.00 24.45 C
ATOM 19 N4 C B 4 -25.609 14.861 19.456 1.00 24.14 N
ATOM 20 C5 C B 4 -23.785 13.732 20.526 1.00 23.65 C
ATOM 21 C6 C B 4 -23.280 13.267 21.681 1.00 23.28 C
ATOM 22 P A B 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 23 OP1 A B 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 24 OP2 A B 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 25 O5' A B 5 -22.126 7.151 25.586 1.00 28.93 O
TER
Atoms:
OP1: (-21.641,7.953,23.275)
OP2: (-24.053,7.788,24.119)
C3': (-21.465,5.468,27.789)
C1': (-21.775,7.299,29.256)
C5': (-20.733,7.051,25.918)
O4': (-20.875,7.725,28.252)
C8: (-23.356,8.729,27.917)
O2': (-20.699,5.335,30.133)
C6: (-26.534,8.349,29.334)
C5: (-25.213,8.389,28.881)
C4: (-24.287,7.621,29.557)
P: (-22.615,8.067,24.378)
C4': (-20.571,6.619,27.358)
C2': (-21.724,5.773,29.263)
C2: (-25.812,6.861,30.949)
N1: (-26.812,7.554,30.391)
N3: (-24.524,6.825,30.615)
N6: (-27.520,9.056,28.782)
N7: (-24.610,9.083,27.844)
N9: (-23.086,7.850,28.931)
O5': (-22.126,7.151,25.586)
O3': (-20.775,4.240,27.614)
OP2: (-24.053,7.788,24.119)
C3': (-21.465,5.468,27.789)
C1': (-21.775,7.299,29.256)
C5': (-20.733,7.051,25.918)
O4': (-20.875,7.725,28.252)
C8: (-23.356,8.729,27.917)
O2': (-20.699,5.335,30.133)
C6: (-26.534,8.349,29.334)
C5: (-25.213,8.389,28.881)
C4: (-24.287,7.621,29.557)
P: (-22.615,8.067,24.378)
C4': (-20.571,6.619,27.358)
C2': (-21.724,5.773,29.263)
C2: (-25.812,6.861,30.949)
N1: (-26.812,7.554,30.391)
N3: (-24.524,6.825,30.615)
N6: (-27.520,9.056,28.782)
N7: (-24.610,9.083,27.844)
N9: (-23.086,7.850,28.931)
O5': (-22.126,7.151,25.586)
O3': (-20.775,4.240,27.614)
C2: (-25.213,14.032,22.873)
OP1: (-18.430,10.286,21.315)
OP2: (-20.193,11.271,19.728)
C4: (-25.059,14.374,20.575)
O5': (-20.583,11.238,22.171)
C3': (-22.627,10.677,24.131)
C1': (-23.402,12.927,24.130)
O4': (-21.988,12.934,24.034)
C5': (-20.233,11.346,23.546)
P: (-19.474,11.299,21.023)
O2: (-25.815,14.123,23.949)
C4': (-21.469,11.627,24.372)
C2': (-23.847,11.516,24.517)
O2': (-24.154,11.489,25.898)
N1: (-23.963,13.411,22.857)
N3: (-25.735,14.511,21.716)
N4: (-25.609,14.861,19.456)
C6: (-23.280,13.267,21.681)
C5: (-23.785,13.732,20.526)
O3': (-22.472,9.551,24.979)
OP1: (-18.430,10.286,21.315)
OP2: (-20.193,11.271,19.728)
C4: (-25.059,14.374,20.575)
O5': (-20.583,11.238,22.171)
C3': (-22.627,10.677,24.131)
C1': (-23.402,12.927,24.130)
O4': (-21.988,12.934,24.034)
C5': (-20.233,11.346,23.546)
P: (-19.474,11.299,21.023)
O2: (-25.815,14.123,23.949)
C4': (-21.469,11.627,24.372)
C2': (-23.847,11.516,24.517)
O2': (-24.154,11.489,25.898)
N1: (-23.963,13.411,22.857)
N3: (-25.735,14.511,21.716)
N4: (-25.609,14.861,19.456)
C6: (-23.280,13.267,21.681)
C5: (-23.785,13.732,20.526)
O3': (-22.472,9.551,24.979)
Image (generated by PyMOL):