ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:912:911

Extra

PDB:
ATOM 1 O3' C A 11 52.864 36.415 111.140 1.00 55.32 O
ATOM 2 P A A 12 54.331 35.938 111.586 1.00 56.01 P
ATOM 3 OP1 A A 12 54.157 34.908 112.645 1.00 57.07 O
ATOM 4 OP2 A A 12 55.141 37.147 111.885 1.00 57.58 O
ATOM 5 O5' A A 12 54.909 35.240 110.273 1.00 54.80 O
ATOM 6 C5' A A 12 54.796 33.818 110.092 1.00 54.92 C
ATOM 7 C4' A A 12 55.532 33.379 108.848 1.00 55.05 C
ATOM 8 O4' A A 12 54.771 33.756 107.669 1.00 54.84 O
ATOM 9 C3' A A 12 56.934 33.953 108.652 1.00 54.78 C
ATOM 10 O3' A A 12 57.746 32.974 107.986 1.00 54.15 O
ATOM 11 C2' A A 12 56.654 35.125 107.714 1.00 54.75 C
ATOM 12 O2' A A 12 57.763 35.547 106.949 1.00 56.57 O
ATOM 13 C1' A A 12 55.598 34.504 106.806 1.00 55.02 C
ATOM 14 N9 A A 12 54.781 35.458 106.058 1.00 54.69 N
ATOM 15 C8 A A 12 53.652 36.131 106.457 1.00 54.41 C
ATOM 16 N7 A A 12 53.163 36.929 105.539 1.00 54.36 N
ATOM 17 C5 A A 12 54.028 36.771 104.464 1.00 53.91 C
ATOM 18 C6 A A 12 54.063 37.351 103.187 1.00 53.20 C
ATOM 19 N6 A A 12 53.168 38.244 102.753 1.00 53.68 N
ATOM 20 N1 A A 12 55.060 36.979 102.356 1.00 52.80 N
ATOM 21 C2 A A 12 55.953 36.082 102.787 1.00 53.36 C
ATOM 22 N3 A A 12 56.026 35.467 103.963 1.00 54.70 N
ATOM 23 C4 A A 12 55.023 35.863 104.767 1.00 54.36 C
ATOM 24 P G A 13 59.080 32.408 108.693 1.00 53.70 P
ATOM 25 OP1 G A 13 59.568 31.248 107.902 1.00 55.31 O
ATOM 26 OP2 G A 13 58.813 32.246 110.145 1.00 54.21 O
ATOM 27 O5' G A 13 60.170 33.552 108.496 1.00 55.43 O
TER

ATOM 1 O3' A B 10 54.412 39.572 107.675 1.00 53.84 O
ATOM 2 P C B 11 53.412 40.803 107.941 1.00 53.74 P
ATOM 3 OP1 C B 11 52.624 41.015 106.693 1.00 53.06 O
ATOM 4 OP2 C B 11 54.189 41.931 108.527 1.00 52.47 O
ATOM 5 O5' C B 11 52.414 40.233 109.044 1.00 53.77 O
ATOM 6 C5' C B 11 52.849 40.046 110.403 1.00 54.06 C
ATOM 7 C4' C B 11 52.321 38.741 110.953 1.00 54.59 C
ATOM 8 O4' C B 11 50.867 38.769 110.956 1.00 54.16 O
ATOM 9 C3' C B 11 52.721 37.474 110.201 1.00 54.58 C
ATOM 10 O3' C B 11 52.864 36.415 111.140 1.00 55.32 O
ATOM 11 C2' C B 11 51.505 37.212 109.322 1.00 54.90 C
ATOM 12 O2' C B 11 51.360 35.851 108.973 1.00 53.87 O
ATOM 13 C1' C B 11 50.373 37.652 110.247 1.00 55.72 C
ATOM 14 N1 C B 11 49.144 38.047 109.541 1.00 58.94 N
ATOM 15 C2 C B 11 48.081 37.131 109.468 1.00 60.10 C
ATOM 16 O2 C B 11 48.202 36.019 110.014 1.00 60.51 O
ATOM 17 N3 C B 11 46.950 37.482 108.805 1.00 61.03 N
ATOM 18 C4 C B 11 46.859 38.688 108.230 1.00 60.97 C
ATOM 19 N4 C B 11 45.735 38.987 107.572 1.00 60.27 N
ATOM 20 C5 C B 11 47.919 39.639 108.300 1.00 60.56 C
ATOM 21 C6 C B 11 49.031 39.281 108.958 1.00 59.88 C
ATOM 22 P A B 12 54.331 35.938 111.586 1.00 56.01 P
ATOM 23 OP1 A B 12 54.157 34.908 112.645 1.00 57.07 O
ATOM 24 OP2 A B 12 55.141 37.147 111.885 1.00 57.58 O
ATOM 25 O5' A B 12 54.909 35.240 110.273 1.00 54.80 O
TER

Atoms:
OP1: (54.157,34.908,112.645)
OP2: (55.141,37.147,111.885)
C3': (56.934,33.953,108.652)
C1': (55.598,34.504,106.806)
C5': (54.796,33.818,110.092)
O4': (54.771,33.756,107.669)
C8: (53.652,36.131,106.457)
O2': (57.763,35.547,106.949)
C6: (54.063,37.351,103.187)
C5: (54.028,36.771,104.464)
C4: (55.023,35.863,104.767)
P: (54.331,35.938,111.586)
C4': (55.532,33.379,108.848)
C2': (56.654,35.125,107.714)
C2: (55.953,36.082,102.787)
N1: (55.060,36.979,102.356)
N3: (56.026,35.467,103.963)
N6: (53.168,38.244,102.753)
N7: (53.163,36.929,105.539)
N9: (54.781,35.458,106.058)
O5': (54.909,35.240,110.273)
O3': (57.746,32.974,107.986)
C2: (48.081,37.131,109.468)
OP1: (52.624,41.015,106.693)
OP2: (54.189,41.931,108.527)
C4: (46.859,38.688,108.230)
O5': (52.414,40.233,109.044)
C3': (52.721,37.474,110.201)
C1': (50.373,37.652,110.247)
O4': (50.867,38.769,110.956)
C5': (52.849,40.046,110.403)
P: (53.412,40.803,107.941)
O2: (48.202,36.019,110.014)
C4': (52.321,38.741,110.953)
C2': (51.505,37.212,109.322)
O2': (51.360,35.851,108.973)
N1: (49.144,38.047,109.541)
N3: (46.950,37.482,108.805)
N4: (45.735,38.987,107.572)
C6: (49.031,39.281,108.958)
C5: (47.919,39.639,108.300)
O3': (52.864,36.415,111.140)
Image (generated by PyMOL):
PyMOL image
show in jmol