Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M121:M120
Extra
PDB:
ATOM 1 O3' C A 120 -42.576 20.800-112.714 1.00229.25 O
ATOM 2 P A A 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 3 OP1 A A 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 4 OP2 A A 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 5 O5' A A 121 -44.727 22.110-113.436 1.00234.43 O
ATOM 6 C5' A A 121 -45.475 23.057-114.261 1.00233.26 C
ATOM 7 C4' A A 121 -46.578 23.776-113.501 1.00237.42 C
ATOM 8 O4' A A 121 -46.348 23.541-112.086 1.00234.71 O
ATOM 9 C3' A A 121 -46.643 25.304-113.620 1.00227.13 C
ATOM 10 O3' A A 121 -47.496 25.776-114.633 1.00234.28 O
ATOM 11 C2' A A 121 -47.081 25.742-112.233 1.00229.89 C
ATOM 12 O2' A A 121 -48.467 25.641-111.994 1.00249.59 O
ATOM 13 C1' A A 121 -46.283 24.773-111.410 1.00225.52 C
ATOM 14 N9 A A 121 -44.887 25.176-111.159 1.00208.44 N
ATOM 15 C8 A A 121 -43.820 24.324-111.105 1.00203.43 C
ATOM 16 N7 A A 121 -42.667 24.911-110.896 1.00190.63 N
ATOM 17 C5 A A 121 -42.990 26.253-110.798 1.00186.74 C
ATOM 18 C6 A A 121 -42.198 27.403-110.577 1.00176.98 C
ATOM 19 N6 A A 121 -40.873 27.342-110.411 1.00169.58 N
ATOM 20 N1 A A 121 -42.816 28.608-110.533 1.00178.53 N
ATOM 21 C2 A A 121 -44.147 28.651-110.699 1.00189.54 C
ATOM 22 N3 A A 121 -44.996 27.639-110.918 1.00200.11 N
ATOM 23 C4 A A 121 -44.356 26.446-110.958 1.00197.74 C
ATOM 24 P C A 122 -47.245 27.237-115.213 1.00222.68 P
ATOM 25 OP1 C A 122 -48.128 27.484-116.378 1.00234.06 O
ATOM 26 OP2 C A 122 -45.826 27.398-115.626 1.00205.54 O
ATOM 27 O5' C A 122 -47.568 28.266-114.029 1.00221.66 O
TER
ATOM 1 O3' U B 119 -35.869 18.487-110.376 1.00227.18 O
ATOM 2 P C B 120 -37.433 18.244-110.760 1.00233.09 P
ATOM 3 OP1 C B 120 -38.162 17.824-109.541 1.00235.64 O
ATOM 4 OP2 C B 120 -37.418 17.311-111.913 1.00249.48 O
ATOM 5 O5' C B 120 -38.060 19.652-111.254 1.00218.96 O
ATOM 6 C5' C B 120 -39.248 19.723-112.130 1.00223.65 C
ATOM 7 C4' C B 120 -40.570 19.923-111.367 1.00224.46 C
ATOM 8 O4' C B 120 -40.195 20.155-109.974 1.00217.74 O
ATOM 9 C3' C B 120 -41.498 21.094-111.750 1.00217.91 C
ATOM 10 O3' C B 120 -42.576 20.800-112.714 1.00229.25 O
ATOM 11 C2' C B 120 -42.091 21.476-110.390 1.00215.83 C
ATOM 12 O2' C B 120 -43.252 20.726-110.084 1.00230.44 O
ATOM 13 C1' C B 120 -40.982 21.167-109.372 1.00210.80 C
ATOM 14 N1 C B 120 -40.085 22.329-108.920 1.00196.87 N
ATOM 15 C2 C B 120 -40.635 23.575-108.521 1.00190.54 C
ATOM 16 O2 C B 120 -41.860 23.759-108.524 1.00195.98 O
ATOM 17 N3 C B 120 -39.797 24.578-108.134 1.00181.17 N
ATOM 18 C4 C B 120 -38.470 24.393-108.124 1.00177.97 C
ATOM 19 N4 C B 120 -37.707 25.420-107.734 1.00171.92 N
ATOM 20 C5 C B 120 -37.880 23.145-108.513 1.00184.47 C
ATOM 21 C6 C B 120 -38.716 22.159-108.894 1.00193.76 C
ATOM 22 P A B 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 23 OP1 A B 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 24 OP2 A B 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 25 O5' A B 121 -44.727 22.110-113.436 1.00234.43 O
TER
ATOM 2 P A A 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 3 OP1 A A 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 4 OP2 A A 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 5 O5' A A 121 -44.727 22.110-113.436 1.00234.43 O
ATOM 6 C5' A A 121 -45.475 23.057-114.261 1.00233.26 C
ATOM 7 C4' A A 121 -46.578 23.776-113.501 1.00237.42 C
ATOM 8 O4' A A 121 -46.348 23.541-112.086 1.00234.71 O
ATOM 9 C3' A A 121 -46.643 25.304-113.620 1.00227.13 C
ATOM 10 O3' A A 121 -47.496 25.776-114.633 1.00234.28 O
ATOM 11 C2' A A 121 -47.081 25.742-112.233 1.00229.89 C
ATOM 12 O2' A A 121 -48.467 25.641-111.994 1.00249.59 O
ATOM 13 C1' A A 121 -46.283 24.773-111.410 1.00225.52 C
ATOM 14 N9 A A 121 -44.887 25.176-111.159 1.00208.44 N
ATOM 15 C8 A A 121 -43.820 24.324-111.105 1.00203.43 C
ATOM 16 N7 A A 121 -42.667 24.911-110.896 1.00190.63 N
ATOM 17 C5 A A 121 -42.990 26.253-110.798 1.00186.74 C
ATOM 18 C6 A A 121 -42.198 27.403-110.577 1.00176.98 C
ATOM 19 N6 A A 121 -40.873 27.342-110.411 1.00169.58 N
ATOM 20 N1 A A 121 -42.816 28.608-110.533 1.00178.53 N
ATOM 21 C2 A A 121 -44.147 28.651-110.699 1.00189.54 C
ATOM 22 N3 A A 121 -44.996 27.639-110.918 1.00200.11 N
ATOM 23 C4 A A 121 -44.356 26.446-110.958 1.00197.74 C
ATOM 24 P C A 122 -47.245 27.237-115.213 1.00222.68 P
ATOM 25 OP1 C A 122 -48.128 27.484-116.378 1.00234.06 O
ATOM 26 OP2 C A 122 -45.826 27.398-115.626 1.00205.54 O
ATOM 27 O5' C A 122 -47.568 28.266-114.029 1.00221.66 O
TER
ATOM 1 O3' U B 119 -35.869 18.487-110.376 1.00227.18 O
ATOM 2 P C B 120 -37.433 18.244-110.760 1.00233.09 P
ATOM 3 OP1 C B 120 -38.162 17.824-109.541 1.00235.64 O
ATOM 4 OP2 C B 120 -37.418 17.311-111.913 1.00249.48 O
ATOM 5 O5' C B 120 -38.060 19.652-111.254 1.00218.96 O
ATOM 6 C5' C B 120 -39.248 19.723-112.130 1.00223.65 C
ATOM 7 C4' C B 120 -40.570 19.923-111.367 1.00224.46 C
ATOM 8 O4' C B 120 -40.195 20.155-109.974 1.00217.74 O
ATOM 9 C3' C B 120 -41.498 21.094-111.750 1.00217.91 C
ATOM 10 O3' C B 120 -42.576 20.800-112.714 1.00229.25 O
ATOM 11 C2' C B 120 -42.091 21.476-110.390 1.00215.83 C
ATOM 12 O2' C B 120 -43.252 20.726-110.084 1.00230.44 O
ATOM 13 C1' C B 120 -40.982 21.167-109.372 1.00210.80 C
ATOM 14 N1 C B 120 -40.085 22.329-108.920 1.00196.87 N
ATOM 15 C2 C B 120 -40.635 23.575-108.521 1.00190.54 C
ATOM 16 O2 C B 120 -41.860 23.759-108.524 1.00195.98 O
ATOM 17 N3 C B 120 -39.797 24.578-108.134 1.00181.17 N
ATOM 18 C4 C B 120 -38.470 24.393-108.124 1.00177.97 C
ATOM 19 N4 C B 120 -37.707 25.420-107.734 1.00171.92 N
ATOM 20 C5 C B 120 -37.880 23.145-108.513 1.00184.47 C
ATOM 21 C6 C B 120 -38.716 22.159-108.894 1.00193.76 C
ATOM 22 P A B 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 23 OP1 A B 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 24 OP2 A B 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 25 O5' A B 121 -44.727 22.110-113.436 1.00234.43 O
TER
Atoms:
OP1: (-42.975,21.394,-115.151)
OP2: (-42.431,23.191,-113.627)
C3': (-46.643,25.304,-113.620)
C1': (-46.283,24.773,-111.410)
C5': (-45.475,23.057,-114.261)
O4': (-46.348,23.541,-112.086)
C8: (-43.820,24.324,-111.105)
O2': (-48.467,25.641,-111.994)
C6: (-42.198,27.403,-110.577)
C5: (-42.990,26.253,-110.798)
C4: (-44.356,26.446,-110.958)
P: (-43.154,21.898,-113.775)
C4': (-46.578,23.776,-113.501)
C2': (-47.081,25.742,-112.233)
C2: (-44.147,28.651,-110.699)
N1: (-42.816,28.608,-110.533)
N3: (-44.996,27.639,-110.918)
N6: (-40.873,27.342,-110.411)
N7: (-42.667,24.911,-110.896)
N9: (-44.887,25.176,-111.159)
O5': (-44.727,22.110,-113.436)
O3': (-47.496,25.776,-114.633)
OP2: (-42.431,23.191,-113.627)
C3': (-46.643,25.304,-113.620)
C1': (-46.283,24.773,-111.410)
C5': (-45.475,23.057,-114.261)
O4': (-46.348,23.541,-112.086)
C8: (-43.820,24.324,-111.105)
O2': (-48.467,25.641,-111.994)
C6: (-42.198,27.403,-110.577)
C5: (-42.990,26.253,-110.798)
C4: (-44.356,26.446,-110.958)
P: (-43.154,21.898,-113.775)
C4': (-46.578,23.776,-113.501)
C2': (-47.081,25.742,-112.233)
C2: (-44.147,28.651,-110.699)
N1: (-42.816,28.608,-110.533)
N3: (-44.996,27.639,-110.918)
N6: (-40.873,27.342,-110.411)
N7: (-42.667,24.911,-110.896)
N9: (-44.887,25.176,-111.159)
O5': (-44.727,22.110,-113.436)
O3': (-47.496,25.776,-114.633)
C2: (-40.635,23.575,-108.521)
OP1: (-38.162,17.824,-109.541)
OP2: (-37.418,17.311,-111.913)
C4: (-38.470,24.393,-108.124)
O5': (-38.060,19.652,-111.254)
C3': (-41.498,21.094,-111.750)
C1': (-40.982,21.167,-109.372)
O4': (-40.195,20.155,-109.974)
C5': (-39.248,19.723,-112.130)
P: (-37.433,18.244,-110.760)
O2: (-41.860,23.759,-108.524)
C4': (-40.570,19.923,-111.367)
C2': (-42.091,21.476,-110.390)
O2': (-43.252,20.726,-110.084)
N1: (-40.085,22.329,-108.920)
N3: (-39.797,24.578,-108.134)
N4: (-37.707,25.420,-107.734)
C6: (-38.716,22.159,-108.894)
C5: (-37.880,23.145,-108.513)
O3': (-42.576,20.800,-112.714)
OP1: (-38.162,17.824,-109.541)
OP2: (-37.418,17.311,-111.913)
C4: (-38.470,24.393,-108.124)
O5': (-38.060,19.652,-111.254)
C3': (-41.498,21.094,-111.750)
C1': (-40.982,21.167,-109.372)
O4': (-40.195,20.155,-109.974)
C5': (-39.248,19.723,-112.130)
P: (-37.433,18.244,-110.760)
O2: (-41.860,23.759,-108.524)
C4': (-40.570,19.923,-111.367)
C2': (-42.091,21.476,-110.390)
O2': (-43.252,20.726,-110.084)
N1: (-40.085,22.329,-108.920)
N3: (-39.797,24.578,-108.134)
N4: (-37.707,25.420,-107.734)
C6: (-38.716,22.159,-108.894)
C5: (-37.880,23.145,-108.513)
O3': (-42.576,20.800,-112.714)
Image (generated by PyMOL):