Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01065:01064
Extra
PDB:
ATOM 1 O3' C A1064 17.067 112.174 117.171 1.00 42.08 O
ATOM 2 P A A1065 15.542 112.522 116.828 1.00 40.51 P
ATOM 3 OP1 A A1065 15.525 113.616 115.833 1.00 39.36 O
ATOM 4 OP2 A A1065 14.811 112.685 118.109 1.00 41.48 O
ATOM 5 O5' A A1065 15.057 111.181 116.128 1.00 39.47 O
ATOM 6 C5' A A1065 13.883 111.122 115.318 1.00 36.35 C
ATOM 7 C4' A A1065 13.701 109.711 114.828 1.00 38.98 C
ATOM 8 O4' A A1065 14.843 109.351 114.005 1.00 39.42 O
ATOM 9 C3' A A1065 13.704 108.687 115.950 1.00 39.57 C
ATOM 10 O3' A A1065 12.395 108.542 116.472 1.00 41.78 O
ATOM 11 C2' A A1065 14.218 107.428 115.266 1.00 38.47 C
ATOM 12 O2' A A1065 13.211 106.750 114.549 1.00 37.63 O
ATOM 13 C1' A A1065 15.233 108.015 114.279 1.00 37.93 C
ATOM 14 N9 A A1065 16.622 108.041 114.743 1.00 37.52 N
ATOM 15 C8 A A1065 17.298 109.091 115.323 1.00 36.86 C
ATOM 16 N7 A A1065 18.557 108.833 115.575 1.00 37.70 N
ATOM 17 C5 A A1065 18.720 107.521 115.143 1.00 36.75 C
ATOM 18 C6 A A1065 19.838 106.666 115.113 1.00 36.75 C
ATOM 19 N6 A A1065 21.049 107.017 115.540 1.00 36.91 N
ATOM 20 N1 A A1065 19.665 105.422 114.620 1.00 37.76 N
ATOM 21 C2 A A1065 18.449 105.071 114.188 1.00 38.00 C
ATOM 22 N3 A A1065 17.327 105.784 114.159 1.00 37.31 N
ATOM 23 C4 A A1065 17.533 107.016 114.652 1.00 36.24 C
ATOM 24 P A A1066 12.101 108.904 118.005 1.00 43.44 P
ATOM 25 OP1 A A1066 10.719 109.441 118.082 1.00 44.71 O
ATOM 26 OP2 A A1066 13.225 109.718 118.530 1.00 43.75 O
ATOM 27 O5' A A1066 12.139 107.482 118.707 1.00 40.30 O
TER
ATOM 1 O3' C B1063 20.729 117.372 117.397 1.00 39.98 O
ATOM 2 P C B1064 20.472 116.711 115.959 1.00 41.43 P
ATOM 3 OP1 C B1064 21.789 116.319 115.393 1.00 43.03 O
ATOM 4 OP2 C B1064 19.586 117.638 115.210 1.00 42.40 O
ATOM 5 O5' C B1064 19.663 115.376 116.265 1.00 38.86 O
ATOM 6 C5' C B1064 18.866 114.756 115.248 1.00 38.84 C
ATOM 7 C4' C B1064 18.493 113.352 115.657 1.00 41.26 C
ATOM 8 O4' C B1064 19.620 112.454 115.466 1.00 40.35 O
ATOM 9 C3' C B1064 18.051 113.191 117.108 1.00 42.69 C
ATOM 10 O3' C B1064 17.067 112.174 117.171 1.00 42.08 O
ATOM 11 C2' C B1064 19.335 112.724 117.791 1.00 42.61 C
ATOM 12 O2' C B1064 19.109 111.970 118.967 1.00 40.39 O
ATOM 13 C1' C B1064 19.967 111.856 116.698 1.00 40.41 C
ATOM 14 N1 C B1064 21.437 111.806 116.770 1.00 40.52 N
ATOM 15 C2 C B1064 22.073 110.565 116.944 1.00 40.94 C
ATOM 16 O2 C B1064 21.387 109.534 117.018 1.00 41.84 O
ATOM 17 N3 C B1064 23.420 110.523 117.017 1.00 39.63 N
ATOM 18 C4 C B1064 24.131 111.647 116.914 1.00 39.98 C
ATOM 19 N4 C B1064 25.457 111.553 116.982 1.00 41.97 N
ATOM 20 C5 C B1064 23.513 112.918 116.734 1.00 40.35 C
ATOM 21 C6 C B1064 22.179 112.952 116.669 1.00 40.35 C
ATOM 22 P A B1065 15.542 112.522 116.828 1.00 40.51 P
ATOM 23 OP1 A B1065 15.525 113.616 115.833 1.00 39.36 O
ATOM 24 OP2 A B1065 14.811 112.685 118.109 1.00 41.48 O
ATOM 25 O5' A B1065 15.057 111.181 116.128 1.00 39.47 O
TER
ATOM 2 P A A1065 15.542 112.522 116.828 1.00 40.51 P
ATOM 3 OP1 A A1065 15.525 113.616 115.833 1.00 39.36 O
ATOM 4 OP2 A A1065 14.811 112.685 118.109 1.00 41.48 O
ATOM 5 O5' A A1065 15.057 111.181 116.128 1.00 39.47 O
ATOM 6 C5' A A1065 13.883 111.122 115.318 1.00 36.35 C
ATOM 7 C4' A A1065 13.701 109.711 114.828 1.00 38.98 C
ATOM 8 O4' A A1065 14.843 109.351 114.005 1.00 39.42 O
ATOM 9 C3' A A1065 13.704 108.687 115.950 1.00 39.57 C
ATOM 10 O3' A A1065 12.395 108.542 116.472 1.00 41.78 O
ATOM 11 C2' A A1065 14.218 107.428 115.266 1.00 38.47 C
ATOM 12 O2' A A1065 13.211 106.750 114.549 1.00 37.63 O
ATOM 13 C1' A A1065 15.233 108.015 114.279 1.00 37.93 C
ATOM 14 N9 A A1065 16.622 108.041 114.743 1.00 37.52 N
ATOM 15 C8 A A1065 17.298 109.091 115.323 1.00 36.86 C
ATOM 16 N7 A A1065 18.557 108.833 115.575 1.00 37.70 N
ATOM 17 C5 A A1065 18.720 107.521 115.143 1.00 36.75 C
ATOM 18 C6 A A1065 19.838 106.666 115.113 1.00 36.75 C
ATOM 19 N6 A A1065 21.049 107.017 115.540 1.00 36.91 N
ATOM 20 N1 A A1065 19.665 105.422 114.620 1.00 37.76 N
ATOM 21 C2 A A1065 18.449 105.071 114.188 1.00 38.00 C
ATOM 22 N3 A A1065 17.327 105.784 114.159 1.00 37.31 N
ATOM 23 C4 A A1065 17.533 107.016 114.652 1.00 36.24 C
ATOM 24 P A A1066 12.101 108.904 118.005 1.00 43.44 P
ATOM 25 OP1 A A1066 10.719 109.441 118.082 1.00 44.71 O
ATOM 26 OP2 A A1066 13.225 109.718 118.530 1.00 43.75 O
ATOM 27 O5' A A1066 12.139 107.482 118.707 1.00 40.30 O
TER
ATOM 1 O3' C B1063 20.729 117.372 117.397 1.00 39.98 O
ATOM 2 P C B1064 20.472 116.711 115.959 1.00 41.43 P
ATOM 3 OP1 C B1064 21.789 116.319 115.393 1.00 43.03 O
ATOM 4 OP2 C B1064 19.586 117.638 115.210 1.00 42.40 O
ATOM 5 O5' C B1064 19.663 115.376 116.265 1.00 38.86 O
ATOM 6 C5' C B1064 18.866 114.756 115.248 1.00 38.84 C
ATOM 7 C4' C B1064 18.493 113.352 115.657 1.00 41.26 C
ATOM 8 O4' C B1064 19.620 112.454 115.466 1.00 40.35 O
ATOM 9 C3' C B1064 18.051 113.191 117.108 1.00 42.69 C
ATOM 10 O3' C B1064 17.067 112.174 117.171 1.00 42.08 O
ATOM 11 C2' C B1064 19.335 112.724 117.791 1.00 42.61 C
ATOM 12 O2' C B1064 19.109 111.970 118.967 1.00 40.39 O
ATOM 13 C1' C B1064 19.967 111.856 116.698 1.00 40.41 C
ATOM 14 N1 C B1064 21.437 111.806 116.770 1.00 40.52 N
ATOM 15 C2 C B1064 22.073 110.565 116.944 1.00 40.94 C
ATOM 16 O2 C B1064 21.387 109.534 117.018 1.00 41.84 O
ATOM 17 N3 C B1064 23.420 110.523 117.017 1.00 39.63 N
ATOM 18 C4 C B1064 24.131 111.647 116.914 1.00 39.98 C
ATOM 19 N4 C B1064 25.457 111.553 116.982 1.00 41.97 N
ATOM 20 C5 C B1064 23.513 112.918 116.734 1.00 40.35 C
ATOM 21 C6 C B1064 22.179 112.952 116.669 1.00 40.35 C
ATOM 22 P A B1065 15.542 112.522 116.828 1.00 40.51 P
ATOM 23 OP1 A B1065 15.525 113.616 115.833 1.00 39.36 O
ATOM 24 OP2 A B1065 14.811 112.685 118.109 1.00 41.48 O
ATOM 25 O5' A B1065 15.057 111.181 116.128 1.00 39.47 O
TER
Atoms:
OP1: (15.525,113.616,115.833)
OP2: (14.811,112.685,118.109)
C3': (13.704,108.687,115.950)
C1': (15.233,108.015,114.279)
C5': (13.883,111.122,115.318)
O4': (14.843,109.351,114.005)
C8: (17.298,109.091,115.323)
O2': (13.211,106.750,114.549)
C6: (19.838,106.666,115.113)
C5: (18.720,107.521,115.143)
C4: (17.533,107.016,114.652)
P: (15.542,112.522,116.828)
C4': (13.701,109.711,114.828)
C2': (14.218,107.428,115.266)
C2: (18.449,105.071,114.188)
N1: (19.665,105.422,114.620)
N3: (17.327,105.784,114.159)
N6: (21.049,107.017,115.540)
N7: (18.557,108.833,115.575)
N9: (16.622,108.041,114.743)
O5': (15.057,111.181,116.128)
O3': (12.395,108.542,116.472)
OP2: (14.811,112.685,118.109)
C3': (13.704,108.687,115.950)
C1': (15.233,108.015,114.279)
C5': (13.883,111.122,115.318)
O4': (14.843,109.351,114.005)
C8: (17.298,109.091,115.323)
O2': (13.211,106.750,114.549)
C6: (19.838,106.666,115.113)
C5: (18.720,107.521,115.143)
C4: (17.533,107.016,114.652)
P: (15.542,112.522,116.828)
C4': (13.701,109.711,114.828)
C2': (14.218,107.428,115.266)
C2: (18.449,105.071,114.188)
N1: (19.665,105.422,114.620)
N3: (17.327,105.784,114.159)
N6: (21.049,107.017,115.540)
N7: (18.557,108.833,115.575)
N9: (16.622,108.041,114.743)
O5': (15.057,111.181,116.128)
O3': (12.395,108.542,116.472)
C2: (22.073,110.565,116.944)
OP1: (21.789,116.319,115.393)
OP2: (19.586,117.638,115.210)
C4: (24.131,111.647,116.914)
O5': (19.663,115.376,116.265)
C3': (18.051,113.191,117.108)
C1': (19.967,111.856,116.698)
O4': (19.620,112.454,115.466)
C5': (18.866,114.756,115.248)
P: (20.472,116.711,115.959)
O2: (21.387,109.534,117.018)
C4': (18.493,113.352,115.657)
C2': (19.335,112.724,117.791)
O2': (19.109,111.970,118.967)
N1: (21.437,111.806,116.770)
N3: (23.420,110.523,117.017)
N4: (25.457,111.553,116.982)
C6: (22.179,112.952,116.669)
C5: (23.513,112.918,116.734)
O3': (17.067,112.174,117.171)
OP1: (21.789,116.319,115.393)
OP2: (19.586,117.638,115.210)
C4: (24.131,111.647,116.914)
O5': (19.663,115.376,116.265)
C3': (18.051,113.191,117.108)
C1': (19.967,111.856,116.698)
O4': (19.620,112.454,115.466)
C5': (18.866,114.756,115.248)
P: (20.472,116.711,115.959)
O2: (21.387,109.534,117.018)
C4': (18.493,113.352,115.657)
C2': (19.335,112.724,117.791)
O2': (19.109,111.970,118.967)
N1: (21.437,111.806,116.770)
N3: (23.420,110.523,117.017)
N4: (25.457,111.553,116.982)
C6: (22.179,112.952,116.669)
C5: (23.513,112.918,116.734)
O3': (17.067,112.174,117.171)
Image (generated by PyMOL):