Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1B23:R9:R42
Extra
PDB:
ATOM 1 O3' A A 8 15.788 36.865 -8.808 1.00 64.28 O
ATOM 2 P A A 9 15.968 35.353 -9.334 1.00 68.19 P
ATOM 3 OP1 A A 9 15.345 35.245 -10.673 1.00 67.98 O
ATOM 4 OP2 A A 9 15.537 34.428 -8.252 1.00 67.66 O
ATOM 5 O5' A A 9 17.538 35.193 -9.543 1.00 68.55 O
ATOM 6 C5' A A 9 18.108 33.901 -9.820 1.00 69.76 C
ATOM 7 C4' A A 9 19.463 34.052 -10.467 1.00 69.33 C
ATOM 8 O4' A A 9 19.307 34.767 -11.716 1.00 67.76 O
ATOM 9 C3' A A 9 20.486 34.858 -9.681 1.00 70.33 C
ATOM 10 O3' A A 9 21.184 34.035 -8.755 1.00 73.96 O
ATOM 11 C2' A A 9 21.405 35.398 -10.771 1.00 66.29 C
ATOM 12 O2' A A 9 22.404 34.484 -11.177 1.00 67.33 O
ATOM 13 C1' A A 9 20.424 35.611 -11.922 1.00 64.63 C
ATOM 14 N9 A A 9 19.944 36.986 -11.983 1.00 62.17 N
ATOM 15 C8 A A 9 18.653 37.450 -11.923 1.00 61.52 C
ATOM 16 N7 A A 9 18.558 38.753 -12.015 1.00 61.14 N
ATOM 17 C5 A A 9 19.873 39.174 -12.141 1.00 60.24 C
ATOM 18 C6 A A 9 20.451 40.445 -12.278 1.00 59.45 C
ATOM 19 N6 A A 9 19.743 41.576 -12.321 1.00 58.86 N
ATOM 20 N1 A A 9 21.796 40.518 -12.371 1.00 59.68 N
ATOM 21 C2 A A 9 22.504 39.378 -12.332 1.00 60.09 C
ATOM 22 N3 A A 9 22.076 38.126 -12.210 1.00 59.60 N
ATOM 23 C4 A A 9 20.739 38.095 -12.118 1.00 60.68 C
ATOM 24 P C A 10 21.430 34.555 -7.256 1.00 75.08 P
ATOM 25 OP1 C A 10 21.854 33.381 -6.450 1.00 77.13 O
ATOM 26 OP2 C A 10 20.231 35.339 -6.848 1.00 72.79 O
ATOM 27 O5' C A 10 22.664 35.555 -7.380 1.00 71.75 O
TER
ATOM 1 O3' U B 41 11.040 38.629 -17.293 1.00 85.18 O
ATOM 2 P C B 42 10.539 38.667 -15.765 1.00 88.14 P
ATOM 3 OP1 C B 42 9.143 38.152 -15.708 1.00 86.11 O
ATOM 4 OP2 C B 42 10.849 40.015 -15.222 1.00 89.99 O
ATOM 5 O5' C B 42 11.491 37.621 -15.044 1.00 86.18 O
ATOM 6 C5' C B 42 11.801 36.366 -15.667 1.00 87.35 C
ATOM 7 C4' C B 42 13.086 35.827 -15.107 1.00 87.85 C
ATOM 8 O4' C B 42 14.196 36.631 -15.590 1.00 87.91 O
ATOM 9 C3' C B 42 13.144 35.863 -13.585 1.00 90.35 C
ATOM 10 O3' C B 42 13.814 34.706 -13.108 1.00 91.29 O
ATOM 11 C2' C B 42 13.963 37.121 -13.307 1.00 89.34 C
ATOM 12 O2' C B 42 14.667 37.107 -12.083 1.00 91.06 O
ATOM 13 C1' C B 42 14.925 37.137 -14.493 1.00 87.26 C
ATOM 14 N1 C B 42 15.401 38.487 -14.817 1.00 84.79 N
ATOM 15 C2 C B 42 16.786 38.724 -14.881 1.00 84.02 C
ATOM 16 O2 C B 42 17.569 37.775 -14.717 1.00 83.84 O
ATOM 17 N3 C B 42 17.232 39.974 -15.119 1.00 83.68 N
ATOM 18 C4 C B 42 16.360 40.967 -15.303 1.00 84.12 C
ATOM 19 N4 C B 42 16.848 42.192 -15.507 1.00 84.38 N
ATOM 20 C5 C B 42 14.949 40.752 -15.277 1.00 84.05 C
ATOM 21 C6 C B 42 14.518 39.509 -15.035 1.00 84.18 C
ATOM 22 P U B 43 12.967 33.384 -12.774 1.00 90.41 P
ATOM 23 OP1 U B 43 13.927 32.377 -12.248 1.00 88.41 O
ATOM 24 OP2 U B 43 12.145 33.068 -13.973 1.00 87.77 O
ATOM 25 O5' U B 43 11.972 33.822 -11.608 1.00 90.48 O
TER
ATOM 2 P A A 9 15.968 35.353 -9.334 1.00 68.19 P
ATOM 3 OP1 A A 9 15.345 35.245 -10.673 1.00 67.98 O
ATOM 4 OP2 A A 9 15.537 34.428 -8.252 1.00 67.66 O
ATOM 5 O5' A A 9 17.538 35.193 -9.543 1.00 68.55 O
ATOM 6 C5' A A 9 18.108 33.901 -9.820 1.00 69.76 C
ATOM 7 C4' A A 9 19.463 34.052 -10.467 1.00 69.33 C
ATOM 8 O4' A A 9 19.307 34.767 -11.716 1.00 67.76 O
ATOM 9 C3' A A 9 20.486 34.858 -9.681 1.00 70.33 C
ATOM 10 O3' A A 9 21.184 34.035 -8.755 1.00 73.96 O
ATOM 11 C2' A A 9 21.405 35.398 -10.771 1.00 66.29 C
ATOM 12 O2' A A 9 22.404 34.484 -11.177 1.00 67.33 O
ATOM 13 C1' A A 9 20.424 35.611 -11.922 1.00 64.63 C
ATOM 14 N9 A A 9 19.944 36.986 -11.983 1.00 62.17 N
ATOM 15 C8 A A 9 18.653 37.450 -11.923 1.00 61.52 C
ATOM 16 N7 A A 9 18.558 38.753 -12.015 1.00 61.14 N
ATOM 17 C5 A A 9 19.873 39.174 -12.141 1.00 60.24 C
ATOM 18 C6 A A 9 20.451 40.445 -12.278 1.00 59.45 C
ATOM 19 N6 A A 9 19.743 41.576 -12.321 1.00 58.86 N
ATOM 20 N1 A A 9 21.796 40.518 -12.371 1.00 59.68 N
ATOM 21 C2 A A 9 22.504 39.378 -12.332 1.00 60.09 C
ATOM 22 N3 A A 9 22.076 38.126 -12.210 1.00 59.60 N
ATOM 23 C4 A A 9 20.739 38.095 -12.118 1.00 60.68 C
ATOM 24 P C A 10 21.430 34.555 -7.256 1.00 75.08 P
ATOM 25 OP1 C A 10 21.854 33.381 -6.450 1.00 77.13 O
ATOM 26 OP2 C A 10 20.231 35.339 -6.848 1.00 72.79 O
ATOM 27 O5' C A 10 22.664 35.555 -7.380 1.00 71.75 O
TER
ATOM 1 O3' U B 41 11.040 38.629 -17.293 1.00 85.18 O
ATOM 2 P C B 42 10.539 38.667 -15.765 1.00 88.14 P
ATOM 3 OP1 C B 42 9.143 38.152 -15.708 1.00 86.11 O
ATOM 4 OP2 C B 42 10.849 40.015 -15.222 1.00 89.99 O
ATOM 5 O5' C B 42 11.491 37.621 -15.044 1.00 86.18 O
ATOM 6 C5' C B 42 11.801 36.366 -15.667 1.00 87.35 C
ATOM 7 C4' C B 42 13.086 35.827 -15.107 1.00 87.85 C
ATOM 8 O4' C B 42 14.196 36.631 -15.590 1.00 87.91 O
ATOM 9 C3' C B 42 13.144 35.863 -13.585 1.00 90.35 C
ATOM 10 O3' C B 42 13.814 34.706 -13.108 1.00 91.29 O
ATOM 11 C2' C B 42 13.963 37.121 -13.307 1.00 89.34 C
ATOM 12 O2' C B 42 14.667 37.107 -12.083 1.00 91.06 O
ATOM 13 C1' C B 42 14.925 37.137 -14.493 1.00 87.26 C
ATOM 14 N1 C B 42 15.401 38.487 -14.817 1.00 84.79 N
ATOM 15 C2 C B 42 16.786 38.724 -14.881 1.00 84.02 C
ATOM 16 O2 C B 42 17.569 37.775 -14.717 1.00 83.84 O
ATOM 17 N3 C B 42 17.232 39.974 -15.119 1.00 83.68 N
ATOM 18 C4 C B 42 16.360 40.967 -15.303 1.00 84.12 C
ATOM 19 N4 C B 42 16.848 42.192 -15.507 1.00 84.38 N
ATOM 20 C5 C B 42 14.949 40.752 -15.277 1.00 84.05 C
ATOM 21 C6 C B 42 14.518 39.509 -15.035 1.00 84.18 C
ATOM 22 P U B 43 12.967 33.384 -12.774 1.00 90.41 P
ATOM 23 OP1 U B 43 13.927 32.377 -12.248 1.00 88.41 O
ATOM 24 OP2 U B 43 12.145 33.068 -13.973 1.00 87.77 O
ATOM 25 O5' U B 43 11.972 33.822 -11.608 1.00 90.48 O
TER
Atoms:
OP1: (15.345,35.245,-10.673)
OP2: (15.537,34.428,-8.252)
C3': (20.486,34.858,-9.681)
C1': (20.424,35.611,-11.922)
C5': (18.108,33.901,-9.820)
O4': (19.307,34.767,-11.716)
C8: (18.653,37.450,-11.923)
O2': (22.404,34.484,-11.177)
C6: (20.451,40.445,-12.278)
C5: (19.873,39.174,-12.141)
C4: (20.739,38.095,-12.118)
P: (15.968,35.353,-9.334)
C4': (19.463,34.052,-10.467)
C2': (21.405,35.398,-10.771)
C2: (22.504,39.378,-12.332)
N1: (21.796,40.518,-12.371)
N3: (22.076,38.126,-12.210)
N6: (19.743,41.576,-12.321)
N7: (18.558,38.753,-12.015)
N9: (19.944,36.986,-11.983)
O5': (17.538,35.193,-9.543)
O3': (21.184,34.035,-8.755)
OP2: (15.537,34.428,-8.252)
C3': (20.486,34.858,-9.681)
C1': (20.424,35.611,-11.922)
C5': (18.108,33.901,-9.820)
O4': (19.307,34.767,-11.716)
C8: (18.653,37.450,-11.923)
O2': (22.404,34.484,-11.177)
C6: (20.451,40.445,-12.278)
C5: (19.873,39.174,-12.141)
C4: (20.739,38.095,-12.118)
P: (15.968,35.353,-9.334)
C4': (19.463,34.052,-10.467)
C2': (21.405,35.398,-10.771)
C2: (22.504,39.378,-12.332)
N1: (21.796,40.518,-12.371)
N3: (22.076,38.126,-12.210)
N6: (19.743,41.576,-12.321)
N7: (18.558,38.753,-12.015)
N9: (19.944,36.986,-11.983)
O5': (17.538,35.193,-9.543)
O3': (21.184,34.035,-8.755)
C2: (16.786,38.724,-14.881)
OP1: (9.143,38.152,-15.708)
OP2: (10.849,40.015,-15.222)
C4: (16.360,40.967,-15.303)
O5': (11.491,37.621,-15.044)
C3': (13.144,35.863,-13.585)
C1': (14.925,37.137,-14.493)
O4': (14.196,36.631,-15.590)
C5': (11.801,36.366,-15.667)
P: (10.539,38.667,-15.765)
O2: (17.569,37.775,-14.717)
C4': (13.086,35.827,-15.107)
C2': (13.963,37.121,-13.307)
O2': (14.667,37.107,-12.083)
N1: (15.401,38.487,-14.817)
N3: (17.232,39.974,-15.119)
N4: (16.848,42.192,-15.507)
C6: (14.518,39.509,-15.035)
C5: (14.949,40.752,-15.277)
O3': (13.814,34.706,-13.108)
OP1: (9.143,38.152,-15.708)
OP2: (10.849,40.015,-15.222)
C4: (16.360,40.967,-15.303)
O5': (11.491,37.621,-15.044)
C3': (13.144,35.863,-13.585)
C1': (14.925,37.137,-14.493)
O4': (14.196,36.631,-15.590)
C5': (11.801,36.366,-15.667)
P: (10.539,38.667,-15.765)
O2: (17.569,37.775,-14.717)
C4': (13.086,35.827,-15.107)
C2': (13.963,37.121,-13.307)
O2': (14.667,37.107,-12.083)
N1: (15.401,38.487,-14.817)
N3: (17.232,39.974,-15.119)
N4: (16.848,42.192,-15.507)
C6: (14.518,39.509,-15.035)
C5: (14.949,40.752,-15.277)
O3': (13.814,34.706,-13.108)
Image (generated by PyMOL):