Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0919:0918
Extra
PDB:
ATOM 1 O3' C A 918 35.663 88.899 79.095 1.00 30.09 O
ATOM 2 P U A 919 34.673 88.026 78.178 1.00 31.81 P
ATOM 3 OP1 U A 919 33.355 88.028 78.858 1.00 32.29 O
ATOM 4 OP2 U A 919 35.318 86.734 77.829 1.00 28.45 O
ATOM 5 O5' U A 919 34.575 88.863 76.830 1.00 31.69 O
ATOM 6 C5' U A 919 34.188 90.251 76.842 1.00 30.98 C
ATOM 7 C4' U A 919 34.374 90.847 75.468 1.00 30.52 C
ATOM 8 O4' U A 919 35.786 90.834 75.130 1.00 29.03 O
ATOM 9 C3' U A 919 33.714 90.072 74.337 1.00 30.22 C
ATOM 10 O3' U A 919 32.334 90.413 74.211 1.00 32.04 O
ATOM 11 C2' U A 919 34.545 90.480 73.130 1.00 27.82 C
ATOM 12 O2' U A 919 34.186 91.744 72.633 1.00 26.19 O
ATOM 13 C1' U A 919 35.942 90.576 73.747 1.00 26.79 C
ATOM 14 N1 U A 919 36.735 89.351 73.594 1.00 24.54 N
ATOM 15 C2 U A 919 37.298 89.107 72.357 1.00 24.64 C
ATOM 16 O2 U A 919 37.141 89.839 71.403 1.00 25.07 O
ATOM 17 N3 U A 919 38.047 87.965 72.276 1.00 24.86 N
ATOM 18 C4 U A 919 38.281 87.053 73.282 1.00 26.32 C
ATOM 19 O4 U A 919 38.974 86.066 73.046 1.00 29.31 O
ATOM 20 C5 U A 919 37.655 87.367 74.533 1.00 25.49 C
ATOM 21 C6 U A 919 36.920 88.478 74.643 1.00 24.58 C
ATOM 22 P C A 920 31.310 89.378 73.524 1.00 31.48 P
ATOM 23 OP1 C A 920 29.950 89.950 73.706 1.00 27.55 O
ATOM 24 OP2 C A 920 31.609 88.012 74.022 1.00 29.31 O
ATOM 25 O5' C A 920 31.679 89.449 71.973 1.00 30.64 O
TER
ATOM 1 O3' C B 917 39.969 85.271 81.525 1.00 27.36 O
ATOM 2 P C B 918 38.750 85.275 80.485 1.00 28.31 P
ATOM 3 OP1 C B 918 37.485 84.982 81.212 1.00 29.12 O
ATOM 4 OP2 C B 918 39.140 84.431 79.320 1.00 27.15 O
ATOM 5 O5' C B 918 38.690 86.785 79.984 1.00 27.34 O
ATOM 6 C5' C B 918 38.146 87.816 80.820 1.00 27.57 C
ATOM 7 C4' C B 918 37.921 89.072 80.017 1.00 28.65 C
ATOM 8 O4' C B 918 39.186 89.525 79.462 1.00 29.29 O
ATOM 9 C3' C B 918 37.049 88.923 78.788 1.00 29.16 C
ATOM 10 O3' C B 918 35.663 88.899 79.095 1.00 30.09 O
ATOM 11 C2' C B 918 37.462 90.138 77.975 1.00 27.55 C
ATOM 12 O2' C B 918 36.960 91.344 78.509 1.00 30.27 O
ATOM 13 C1' C B 918 38.968 90.120 78.193 1.00 25.52 C
ATOM 14 N1 C B 918 39.668 89.320 77.175 1.00 23.92 N
ATOM 15 C2 C B 918 39.812 89.847 75.881 1.00 24.59 C
ATOM 16 O2 C B 918 39.326 90.955 75.621 1.00 24.36 O
ATOM 17 N3 C B 918 40.473 89.135 74.950 1.00 24.55 N
ATOM 18 C4 C B 918 40.982 87.945 75.262 1.00 23.98 C
ATOM 19 N4 C B 918 41.649 87.292 74.313 1.00 26.08 N
ATOM 20 C5 C B 918 40.835 87.376 76.562 1.00 22.77 C
ATOM 21 C6 C B 918 40.178 88.090 77.477 1.00 21.31 C
ATOM 22 P U B 919 34.673 88.026 78.178 1.00 31.81 P
ATOM 23 OP1 U B 919 33.355 88.028 78.858 1.00 32.29 O
ATOM 24 OP2 U B 919 35.318 86.734 77.829 1.00 28.45 O
ATOM 25 O5' U B 919 34.575 88.863 76.830 1.00 31.69 O
TER
ATOM 2 P U A 919 34.673 88.026 78.178 1.00 31.81 P
ATOM 3 OP1 U A 919 33.355 88.028 78.858 1.00 32.29 O
ATOM 4 OP2 U A 919 35.318 86.734 77.829 1.00 28.45 O
ATOM 5 O5' U A 919 34.575 88.863 76.830 1.00 31.69 O
ATOM 6 C5' U A 919 34.188 90.251 76.842 1.00 30.98 C
ATOM 7 C4' U A 919 34.374 90.847 75.468 1.00 30.52 C
ATOM 8 O4' U A 919 35.786 90.834 75.130 1.00 29.03 O
ATOM 9 C3' U A 919 33.714 90.072 74.337 1.00 30.22 C
ATOM 10 O3' U A 919 32.334 90.413 74.211 1.00 32.04 O
ATOM 11 C2' U A 919 34.545 90.480 73.130 1.00 27.82 C
ATOM 12 O2' U A 919 34.186 91.744 72.633 1.00 26.19 O
ATOM 13 C1' U A 919 35.942 90.576 73.747 1.00 26.79 C
ATOM 14 N1 U A 919 36.735 89.351 73.594 1.00 24.54 N
ATOM 15 C2 U A 919 37.298 89.107 72.357 1.00 24.64 C
ATOM 16 O2 U A 919 37.141 89.839 71.403 1.00 25.07 O
ATOM 17 N3 U A 919 38.047 87.965 72.276 1.00 24.86 N
ATOM 18 C4 U A 919 38.281 87.053 73.282 1.00 26.32 C
ATOM 19 O4 U A 919 38.974 86.066 73.046 1.00 29.31 O
ATOM 20 C5 U A 919 37.655 87.367 74.533 1.00 25.49 C
ATOM 21 C6 U A 919 36.920 88.478 74.643 1.00 24.58 C
ATOM 22 P C A 920 31.310 89.378 73.524 1.00 31.48 P
ATOM 23 OP1 C A 920 29.950 89.950 73.706 1.00 27.55 O
ATOM 24 OP2 C A 920 31.609 88.012 74.022 1.00 29.31 O
ATOM 25 O5' C A 920 31.679 89.449 71.973 1.00 30.64 O
TER
ATOM 1 O3' C B 917 39.969 85.271 81.525 1.00 27.36 O
ATOM 2 P C B 918 38.750 85.275 80.485 1.00 28.31 P
ATOM 3 OP1 C B 918 37.485 84.982 81.212 1.00 29.12 O
ATOM 4 OP2 C B 918 39.140 84.431 79.320 1.00 27.15 O
ATOM 5 O5' C B 918 38.690 86.785 79.984 1.00 27.34 O
ATOM 6 C5' C B 918 38.146 87.816 80.820 1.00 27.57 C
ATOM 7 C4' C B 918 37.921 89.072 80.017 1.00 28.65 C
ATOM 8 O4' C B 918 39.186 89.525 79.462 1.00 29.29 O
ATOM 9 C3' C B 918 37.049 88.923 78.788 1.00 29.16 C
ATOM 10 O3' C B 918 35.663 88.899 79.095 1.00 30.09 O
ATOM 11 C2' C B 918 37.462 90.138 77.975 1.00 27.55 C
ATOM 12 O2' C B 918 36.960 91.344 78.509 1.00 30.27 O
ATOM 13 C1' C B 918 38.968 90.120 78.193 1.00 25.52 C
ATOM 14 N1 C B 918 39.668 89.320 77.175 1.00 23.92 N
ATOM 15 C2 C B 918 39.812 89.847 75.881 1.00 24.59 C
ATOM 16 O2 C B 918 39.326 90.955 75.621 1.00 24.36 O
ATOM 17 N3 C B 918 40.473 89.135 74.950 1.00 24.55 N
ATOM 18 C4 C B 918 40.982 87.945 75.262 1.00 23.98 C
ATOM 19 N4 C B 918 41.649 87.292 74.313 1.00 26.08 N
ATOM 20 C5 C B 918 40.835 87.376 76.562 1.00 22.77 C
ATOM 21 C6 C B 918 40.178 88.090 77.477 1.00 21.31 C
ATOM 22 P U B 919 34.673 88.026 78.178 1.00 31.81 P
ATOM 23 OP1 U B 919 33.355 88.028 78.858 1.00 32.29 O
ATOM 24 OP2 U B 919 35.318 86.734 77.829 1.00 28.45 O
ATOM 25 O5' U B 919 34.575 88.863 76.830 1.00 31.69 O
TER
Atoms:
C4: (38.281,87.053,73.282)
N3: (38.047,87.965,72.276)
OP1: (33.355,88.028,78.858)
OP2: (35.318,86.734,77.829)
C2: (37.298,89.107,72.357)
C1': (35.942,90.576,73.747)
C3': (33.714,90.072,74.337)
O5': (34.575,88.863,76.830)
O4': (35.786,90.834,75.130)
C5': (34.188,90.251,76.842)
P: (34.673,88.026,78.178)
C4': (34.374,90.847,75.468)
C2': (34.545,90.480,73.130)
O2': (34.186,91.744,72.633)
N1: (36.735,89.351,73.594)
O4: (38.974,86.066,73.046)
O2: (37.141,89.839,71.403)
C6: (36.920,88.478,74.643)
C5: (37.655,87.367,74.533)
O3': (32.334,90.413,74.211)
N3: (38.047,87.965,72.276)
OP1: (33.355,88.028,78.858)
OP2: (35.318,86.734,77.829)
C2: (37.298,89.107,72.357)
C1': (35.942,90.576,73.747)
C3': (33.714,90.072,74.337)
O5': (34.575,88.863,76.830)
O4': (35.786,90.834,75.130)
C5': (34.188,90.251,76.842)
P: (34.673,88.026,78.178)
C4': (34.374,90.847,75.468)
C2': (34.545,90.480,73.130)
O2': (34.186,91.744,72.633)
N1: (36.735,89.351,73.594)
O4: (38.974,86.066,73.046)
O2: (37.141,89.839,71.403)
C6: (36.920,88.478,74.643)
C5: (37.655,87.367,74.533)
O3': (32.334,90.413,74.211)
C2: (39.812,89.847,75.881)
OP1: (37.485,84.982,81.212)
OP2: (39.140,84.431,79.320)
C4: (40.982,87.945,75.262)
O5': (38.690,86.785,79.984)
C3': (37.049,88.923,78.788)
C1': (38.968,90.120,78.193)
O4': (39.186,89.525,79.462)
C5': (38.146,87.816,80.820)
P: (38.750,85.275,80.485)
O2: (39.326,90.955,75.621)
C4': (37.921,89.072,80.017)
C2': (37.462,90.138,77.975)
O2': (36.960,91.344,78.509)
N1: (39.668,89.320,77.175)
N3: (40.473,89.135,74.950)
N4: (41.649,87.292,74.313)
C6: (40.178,88.090,77.477)
C5: (40.835,87.376,76.562)
O3': (35.663,88.899,79.095)
OP1: (37.485,84.982,81.212)
OP2: (39.140,84.431,79.320)
C4: (40.982,87.945,75.262)
O5': (38.690,86.785,79.984)
C3': (37.049,88.923,78.788)
C1': (38.968,90.120,78.193)
O4': (39.186,89.525,79.462)
C5': (38.146,87.816,80.820)
P: (38.750,85.275,80.485)
O2: (39.326,90.955,75.621)
C4': (37.921,89.072,80.017)
C2': (37.462,90.138,77.975)
O2': (36.960,91.344,78.509)
N1: (39.668,89.320,77.175)
N3: (40.473,89.135,74.950)
N4: (41.649,87.292,74.313)
C6: (40.178,88.090,77.477)
C5: (40.835,87.376,76.562)
O3': (35.663,88.899,79.095)
Image (generated by PyMOL):