ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R9X:C16:C15

Extra

PDB:
ATOM 1 O3' C A 15 44.757 21.639 -13.051 1.00168.99 O
ATOM 2 P U A 16 43.505 21.223 -13.963 1.00148.77 P
ATOM 3 OP1 U A 16 43.951 21.147 -15.374 1.00155.90 O
ATOM 4 OP2 U A 16 42.346 22.072 -13.607 1.00140.48 O
ATOM 5 O5' U A 16 43.106 19.759 -13.445 1.00145.68 O
ATOM 6 C5' U A 16 43.907 18.617 -13.723 1.00142.50 C
ATOM 7 C4' U A 16 43.264 17.345 -13.220 1.00140.36 C
ATOM 8 O4' U A 16 43.124 17.406 -11.774 1.00142.39 O
ATOM 9 C3' U A 16 41.852 17.054 -13.718 1.00137.60 C
ATOM 10 O3' U A 16 41.807 16.470 -15.012 1.00132.18 O
ATOM 11 C2' U A 16 41.306 16.147 -12.622 1.00141.40 C
ATOM 12 O2' U A 16 41.824 14.830 -12.751 1.00140.68 O
ATOM 13 C1' U A 16 41.917 16.787 -11.376 1.00142.02 C
ATOM 14 N1 U A 16 41.013 17.817 -10.750 1.00140.33 N
ATOM 15 C2 U A 16 39.879 17.423 -10.067 1.00138.98 C
ATOM 16 O2 U A 16 39.557 16.253 -9.929 1.00135.46 O
ATOM 17 N3 U A 16 39.132 18.460 -9.544 1.00141.80 N
ATOM 18 C4 U A 16 39.391 19.821 -9.629 1.00140.34 C
ATOM 19 O4 U A 16 38.635 20.640 -9.112 1.00139.69 O
ATOM 20 C5 U A 16 40.586 20.149 -10.356 1.00139.84 C
ATOM 21 C6 U A 16 41.326 19.158 -10.873 1.00141.58 C
ATOM 22 P G A 17 40.468 16.492 -15.904 1.00125.33 P
ATOM 23 OP1 G A 17 40.771 15.960 -17.251 1.00129.41 O
ATOM 24 OP2 G A 17 39.808 17.810 -15.772 1.00120.13 O
ATOM 25 O5' G A 17 39.492 15.461 -15.161 1.00108.73 O
TER

ATOM 1 O3' C B 14 44.922 26.767 -10.076 1.00195.76 O
ATOM 2 P C B 15 43.807 26.219 -11.097 1.00204.73 P
ATOM 3 OP1 C B 15 43.648 27.172 -12.220 1.00202.17 O
ATOM 4 OP2 C B 15 42.617 25.811 -10.317 1.00206.02 O
ATOM 5 O5' C B 15 44.441 24.835 -11.609 1.00181.06 O
ATOM 6 C5' C B 15 44.765 23.928 -10.568 1.00177.03 C
ATOM 7 C4' C B 15 45.519 22.680 -10.954 1.00168.48 C
ATOM 8 O4' C B 15 45.972 22.094 -9.704 1.00162.90 O
ATOM 9 C3' C B 15 44.693 21.591 -11.634 1.00167.13 C
ATOM 10 O3' C B 15 44.757 21.639 -13.051 1.00168.99 O
ATOM 11 C2' C B 15 45.234 20.294 -11.039 1.00163.20 C
ATOM 12 O2' C B 15 46.416 19.875 -11.706 1.00163.16 O
ATOM 13 C1' C B 15 45.593 20.742 -9.625 1.00161.49 C
ATOM 14 N1 C B 15 44.395 20.742 -8.726 1.00160.28 N
ATOM 15 C2 C B 15 44.070 19.608 -7.979 1.00158.05 C
ATOM 16 O2 C B 15 44.796 18.604 -8.068 1.00151.84 O
ATOM 17 N3 C B 15 42.965 19.661 -7.181 1.00158.58 N
ATOM 18 C4 C B 15 42.208 20.766 -7.113 1.00155.61 C
ATOM 19 N4 C B 15 41.136 20.769 -6.314 1.00155.15 N
ATOM 20 C5 C B 15 42.521 21.927 -7.869 1.00153.87 C
ATOM 21 C6 C B 15 43.606 21.859 -8.642 1.00157.11 C
ATOM 22 P U B 16 43.505 21.223 -13.963 1.00148.77 P
ATOM 23 OP1 U B 16 43.951 21.147 -15.374 1.00155.90 O
ATOM 24 OP2 U B 16 42.346 22.072 -13.607 1.00140.48 O
ATOM 25 O5' U B 16 43.106 19.759 -13.445 1.00145.68 O
TER

Atoms:
C4: (39.391,19.821,-9.629)
N3: (39.132,18.460,-9.544)
OP1: (43.951,21.147,-15.374)
OP2: (42.346,22.072,-13.607)
C2: (39.879,17.423,-10.067)
C1': (41.917,16.787,-11.376)
C3': (41.852,17.054,-13.718)
O5': (43.106,19.759,-13.445)
O4': (43.124,17.406,-11.774)
C5': (43.907,18.617,-13.723)
P: (43.505,21.223,-13.963)
C4': (43.264,17.345,-13.220)
C2': (41.306,16.147,-12.622)
O2': (41.824,14.830,-12.751)
N1: (41.013,17.817,-10.750)
O4: (38.635,20.640,-9.112)
O2: (39.557,16.253,-9.929)
C6: (41.326,19.158,-10.873)
C5: (40.586,20.149,-10.356)
O3': (41.807,16.470,-15.012)
C2: (44.070,19.608,-7.979)
OP1: (43.648,27.172,-12.220)
OP2: (42.617,25.811,-10.317)
C4: (42.208,20.766,-7.113)
O5': (44.441,24.835,-11.609)
C3': (44.693,21.591,-11.634)
C1': (45.593,20.742,-9.625)
O4': (45.972,22.094,-9.704)
C5': (44.765,23.928,-10.568)
P: (43.807,26.219,-11.097)
O2: (44.796,18.604,-8.068)
C4': (45.519,22.680,-10.954)
C2': (45.234,20.294,-11.039)
O2': (46.416,19.875,-11.706)
N1: (44.395,20.742,-8.726)
N3: (42.965,19.661,-7.181)
N4: (41.136,20.769,-6.314)
C6: (43.606,21.859,-8.642)
C5: (42.521,21.927,-7.869)
O3': (44.757,21.639,-13.051)
Image (generated by PyMOL):
PyMOL image
show in jmol