Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01065:01064
Extra
PDB:
ATOM 1 O3' C A1064 17.195 112.339 117.296 1.00 51.02 O
ATOM 2 P A A1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 3 OP1 A A1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 4 OP2 A A1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 5 O5' A A1065 15.014 111.305 116.642 1.00 47.07 O
ATOM 6 C5' A A1065 14.014 111.222 115.616 1.00 44.71 C
ATOM 7 C4' A A1065 13.889 109.798 115.136 1.00 45.27 C
ATOM 8 O4' A A1065 15.034 109.434 114.327 1.00 45.59 O
ATOM 9 C3' A A1065 13.874 108.778 116.252 1.00 45.27 C
ATOM 10 O3' A A1065 12.575 108.672 116.771 1.00 45.84 O
ATOM 11 C2' A A1065 14.369 107.512 115.572 1.00 44.95 C
ATOM 12 O2' A A1065 13.361 106.846 114.850 1.00 45.48 O
ATOM 13 C1' A A1065 15.395 108.087 114.592 1.00 45.40 C
ATOM 14 N9 A A1065 16.780 108.083 115.067 1.00 45.59 N
ATOM 15 C8 A A1065 17.458 109.115 115.677 1.00 44.94 C
ATOM 16 N7 A A1065 18.710 108.843 115.931 1.00 46.33 N
ATOM 17 C5 A A1065 18.868 107.540 115.476 1.00 45.54 C
ATOM 18 C6 A A1065 19.974 106.680 115.449 1.00 46.19 C
ATOM 19 N6 A A1065 21.175 107.010 115.928 1.00 46.83 N
ATOM 20 N1 A A1065 19.803 105.451 114.910 1.00 47.42 N
ATOM 21 C2 A A1065 18.591 105.118 114.447 1.00 45.71 C
ATOM 22 N3 A A1065 17.476 105.835 114.425 1.00 45.10 N
ATOM 23 C4 A A1065 17.685 107.054 114.956 1.00 45.11 C
ATOM 24 P A A1066 12.304 109.067 118.292 1.00 47.56 P
ATOM 25 OP1 A A1066 10.908 109.541 118.371 1.00 48.46 O
ATOM 26 OP2 A A1066 13.403 109.945 118.774 1.00 45.86 O
ATOM 27 O5' A A1066 12.376 107.660 119.015 1.00 45.06 O
TER
ATOM 1 O3' C B1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 2 P C B1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 3 OP1 C B1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 4 OP2 C B1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 5 O5' C B1064 19.682 115.661 116.513 1.00 45.49 O
ATOM 6 C5' C B1064 18.966 115.011 115.464 1.00 45.49 C
ATOM 7 C4' C B1064 18.643 113.592 115.857 1.00 49.13 C
ATOM 8 O4' C B1064 19.811 112.744 115.687 1.00 50.03 O
ATOM 9 C3' C B1064 18.162 113.380 117.290 1.00 50.96 C
ATOM 10 O3' C B1064 17.195 112.339 117.296 1.00 51.02 O
ATOM 11 C2' C B1064 19.430 112.918 118.001 1.00 50.66 C
ATOM 12 O2' C B1064 19.182 112.110 119.130 1.00 49.85 O
ATOM 13 C1' C B1064 20.107 112.092 116.908 1.00 50.44 C
ATOM 14 N1 C B1064 21.570 112.041 117.048 1.00 50.32 N
ATOM 15 C2 C B1064 22.211 110.792 117.158 1.00 50.33 C
ATOM 16 O2 C B1064 21.532 109.750 117.157 1.00 48.06 O
ATOM 17 N3 C B1064 23.555 110.758 117.260 1.00 51.49 N
ATOM 18 C4 C B1064 24.256 111.897 117.255 1.00 51.36 C
ATOM 19 N4 C B1064 25.588 111.814 117.331 1.00 52.38 N
ATOM 20 C5 C B1064 23.628 113.171 117.164 1.00 51.00 C
ATOM 21 C6 C B1064 22.302 113.197 117.063 1.00 49.59 C
ATOM 22 P A B1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 23 OP1 A B1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 24 OP2 A B1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 25 O5' A B1065 15.014 111.305 116.642 1.00 47.07 O
TER
ATOM 2 P A A1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 3 OP1 A A1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 4 OP2 A A1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 5 O5' A A1065 15.014 111.305 116.642 1.00 47.07 O
ATOM 6 C5' A A1065 14.014 111.222 115.616 1.00 44.71 C
ATOM 7 C4' A A1065 13.889 109.798 115.136 1.00 45.27 C
ATOM 8 O4' A A1065 15.034 109.434 114.327 1.00 45.59 O
ATOM 9 C3' A A1065 13.874 108.778 116.252 1.00 45.27 C
ATOM 10 O3' A A1065 12.575 108.672 116.771 1.00 45.84 O
ATOM 11 C2' A A1065 14.369 107.512 115.572 1.00 44.95 C
ATOM 12 O2' A A1065 13.361 106.846 114.850 1.00 45.48 O
ATOM 13 C1' A A1065 15.395 108.087 114.592 1.00 45.40 C
ATOM 14 N9 A A1065 16.780 108.083 115.067 1.00 45.59 N
ATOM 15 C8 A A1065 17.458 109.115 115.677 1.00 44.94 C
ATOM 16 N7 A A1065 18.710 108.843 115.931 1.00 46.33 N
ATOM 17 C5 A A1065 18.868 107.540 115.476 1.00 45.54 C
ATOM 18 C6 A A1065 19.974 106.680 115.449 1.00 46.19 C
ATOM 19 N6 A A1065 21.175 107.010 115.928 1.00 46.83 N
ATOM 20 N1 A A1065 19.803 105.451 114.910 1.00 47.42 N
ATOM 21 C2 A A1065 18.591 105.118 114.447 1.00 45.71 C
ATOM 22 N3 A A1065 17.476 105.835 114.425 1.00 45.10 N
ATOM 23 C4 A A1065 17.685 107.054 114.956 1.00 45.11 C
ATOM 24 P A A1066 12.304 109.067 118.292 1.00 47.56 P
ATOM 25 OP1 A A1066 10.908 109.541 118.371 1.00 48.46 O
ATOM 26 OP2 A A1066 13.403 109.945 118.774 1.00 45.86 O
ATOM 27 O5' A A1066 12.376 107.660 119.015 1.00 45.06 O
TER
ATOM 1 O3' C B1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 2 P C B1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 3 OP1 C B1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 4 OP2 C B1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 5 O5' C B1064 19.682 115.661 116.513 1.00 45.49 O
ATOM 6 C5' C B1064 18.966 115.011 115.464 1.00 45.49 C
ATOM 7 C4' C B1064 18.643 113.592 115.857 1.00 49.13 C
ATOM 8 O4' C B1064 19.811 112.744 115.687 1.00 50.03 O
ATOM 9 C3' C B1064 18.162 113.380 117.290 1.00 50.96 C
ATOM 10 O3' C B1064 17.195 112.339 117.296 1.00 51.02 O
ATOM 11 C2' C B1064 19.430 112.918 118.001 1.00 50.66 C
ATOM 12 O2' C B1064 19.182 112.110 119.130 1.00 49.85 O
ATOM 13 C1' C B1064 20.107 112.092 116.908 1.00 50.44 C
ATOM 14 N1 C B1064 21.570 112.041 117.048 1.00 50.32 N
ATOM 15 C2 C B1064 22.211 110.792 117.158 1.00 50.33 C
ATOM 16 O2 C B1064 21.532 109.750 117.157 1.00 48.06 O
ATOM 17 N3 C B1064 23.555 110.758 117.260 1.00 51.49 N
ATOM 18 C4 C B1064 24.256 111.897 117.255 1.00 51.36 C
ATOM 19 N4 C B1064 25.588 111.814 117.331 1.00 52.38 N
ATOM 20 C5 C B1064 23.628 113.171 117.164 1.00 51.00 C
ATOM 21 C6 C B1064 22.302 113.197 117.063 1.00 49.59 C
ATOM 22 P A B1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 23 OP1 A B1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 24 OP2 A B1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 25 O5' A B1065 15.014 111.305 116.642 1.00 47.07 O
TER
Atoms:
OP1: (15.603,113.628,115.922)
OP2: (15.084,113.116,118.376)
C3': (13.874,108.778,116.252)
C1': (15.395,108.087,114.592)
C5': (14.014,111.222,115.616)
O4': (15.034,109.434,114.327)
C8: (17.458,109.115,115.677)
O2': (13.361,106.846,114.850)
C6: (19.974,106.680,115.449)
C5: (18.868,107.540,115.476)
C4: (17.685,107.054,114.956)
P: (15.651,112.699,117.070)
C4': (13.889,109.798,115.136)
C2': (14.369,107.512,115.572)
C2: (18.591,105.118,114.447)
N1: (19.803,105.451,114.910)
N3: (17.476,105.835,114.425)
N6: (21.175,107.010,115.928)
N7: (18.710,108.843,115.931)
N9: (16.780,108.083,115.067)
O5': (15.014,111.305,116.642)
O3': (12.575,108.672,116.771)
OP2: (15.084,113.116,118.376)
C3': (13.874,108.778,116.252)
C1': (15.395,108.087,114.592)
C5': (14.014,111.222,115.616)
O4': (15.034,109.434,114.327)
C8: (17.458,109.115,115.677)
O2': (13.361,106.846,114.850)
C6: (19.974,106.680,115.449)
C5: (18.868,107.540,115.476)
C4: (17.685,107.054,114.956)
P: (15.651,112.699,117.070)
C4': (13.889,109.798,115.136)
C2': (14.369,107.512,115.572)
C2: (18.591,105.118,114.447)
N1: (19.803,105.451,114.910)
N3: (17.476,105.835,114.425)
N6: (21.175,107.010,115.928)
N7: (18.710,108.843,115.931)
N9: (16.780,108.083,115.067)
O5': (15.014,111.305,116.642)
O3': (12.575,108.672,116.771)
C2: (22.211,110.792,117.158)
OP1: (21.953,116.283,115.693)
OP2: (19.961,117.894,115.406)
C4: (24.256,111.897,117.255)
O5': (19.682,115.661,116.513)
C3': (18.162,113.380,117.290)
C1': (20.107,112.092,116.908)
O4': (19.811,112.744,115.687)
C5': (18.966,115.011,115.464)
P: (20.676,116.867,116.205)
O2: (21.532,109.750,117.157)
C4': (18.643,113.592,115.857)
C2': (19.430,112.918,118.001)
O2': (19.182,112.110,119.130)
N1: (21.570,112.041,117.048)
N3: (23.555,110.758,117.260)
N4: (25.588,111.814,117.331)
C6: (22.302,113.197,117.063)
C5: (23.628,113.171,117.164)
O3': (17.195,112.339,117.296)
OP1: (21.953,116.283,115.693)
OP2: (19.961,117.894,115.406)
C4: (24.256,111.897,117.255)
O5': (19.682,115.661,116.513)
C3': (18.162,113.380,117.290)
C1': (20.107,112.092,116.908)
O4': (19.811,112.744,115.687)
C5': (18.966,115.011,115.464)
P: (20.676,116.867,116.205)
O2: (21.532,109.750,117.157)
C4': (18.643,113.592,115.857)
C2': (19.430,112.918,118.001)
O2': (19.182,112.110,119.130)
N1: (21.570,112.041,117.048)
N3: (23.555,110.758,117.260)
N4: (25.588,111.814,117.331)
C6: (22.302,113.197,117.063)
C5: (23.628,113.171,117.164)
O3': (17.195,112.339,117.296)
Image (generated by PyMOL):