Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2090:A2089
Extra
PDB:
ATOM 1 O3' C A2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 2 P A A2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 3 OP1 A A2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 4 OP2 A A2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 5 O5' A A2090 116.921 117.958 30.986 1.00 75.32 O
ATOM 6 C5' A A2090 116.028 117.592 29.912 1.00 72.38 C
ATOM 7 C4' A A2090 115.085 116.511 30.376 1.00 70.52 C
ATOM 8 O4' A A2090 115.854 115.344 30.783 1.00 70.23 O
ATOM 9 C3' A A2090 114.294 116.860 31.623 1.00 69.65 C
ATOM 10 O3' A A2090 113.167 117.646 31.303 1.00 68.48 O
ATOM 11 C2' A A2090 113.933 115.489 32.166 1.00 69.21 C
ATOM 12 O2' A A2090 112.889 114.906 31.409 1.00 68.20 O
ATOM 13 C1' A A2090 115.236 114.733 31.912 1.00 69.63 C
ATOM 14 N9 A A2090 116.183 114.760 33.033 1.00 70.11 N
ATOM 15 C8 A A2090 117.502 115.146 32.978 1.00 70.30 C
ATOM 16 N7 A A2090 118.156 114.965 34.101 1.00 70.50 N
ATOM 17 C5 A A2090 117.202 114.444 34.963 1.00 70.52 C
ATOM 18 C6 A A2090 117.278 113.998 36.299 1.00 70.48 C
ATOM 19 N6 A A2090 118.409 113.957 37.006 1.00 70.31 N
ATOM 20 N1 A A2090 116.145 113.568 36.881 1.00 70.40 N
ATOM 21 C2 A A2090 115.022 113.556 36.158 1.00 70.47 C
ATOM 22 N3 A A2090 114.828 113.914 34.883 1.00 70.78 N
ATOM 23 C4 A A2090 115.972 114.353 34.333 1.00 70.36 C
ATOM 24 P C A2091 112.960 119.060 32.033 1.00 67.08 P
ATOM 25 OP1 C A2091 111.618 119.528 31.649 1.00 67.29 O
ATOM 26 OP2 C A2091 114.146 119.914 31.754 1.00 68.11 O
ATOM 27 O5' C A2091 112.917 118.681 33.574 1.00 65.56 O
TER
ATOM 1 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 2 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C B2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C B2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C B2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C B2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C B2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C B2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C B2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C B2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C B2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C B2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C B2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C B2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C B2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C B2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C B2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C B2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A B2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A B2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A B2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A B2090 116.921 117.958 30.986 1.00 75.32 O
TER
ATOM 2 P A A2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 3 OP1 A A2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 4 OP2 A A2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 5 O5' A A2090 116.921 117.958 30.986 1.00 75.32 O
ATOM 6 C5' A A2090 116.028 117.592 29.912 1.00 72.38 C
ATOM 7 C4' A A2090 115.085 116.511 30.376 1.00 70.52 C
ATOM 8 O4' A A2090 115.854 115.344 30.783 1.00 70.23 O
ATOM 9 C3' A A2090 114.294 116.860 31.623 1.00 69.65 C
ATOM 10 O3' A A2090 113.167 117.646 31.303 1.00 68.48 O
ATOM 11 C2' A A2090 113.933 115.489 32.166 1.00 69.21 C
ATOM 12 O2' A A2090 112.889 114.906 31.409 1.00 68.20 O
ATOM 13 C1' A A2090 115.236 114.733 31.912 1.00 69.63 C
ATOM 14 N9 A A2090 116.183 114.760 33.033 1.00 70.11 N
ATOM 15 C8 A A2090 117.502 115.146 32.978 1.00 70.30 C
ATOM 16 N7 A A2090 118.156 114.965 34.101 1.00 70.50 N
ATOM 17 C5 A A2090 117.202 114.444 34.963 1.00 70.52 C
ATOM 18 C6 A A2090 117.278 113.998 36.299 1.00 70.48 C
ATOM 19 N6 A A2090 118.409 113.957 37.006 1.00 70.31 N
ATOM 20 N1 A A2090 116.145 113.568 36.881 1.00 70.40 N
ATOM 21 C2 A A2090 115.022 113.556 36.158 1.00 70.47 C
ATOM 22 N3 A A2090 114.828 113.914 34.883 1.00 70.78 N
ATOM 23 C4 A A2090 115.972 114.353 34.333 1.00 70.36 C
ATOM 24 P C A2091 112.960 119.060 32.033 1.00 67.08 P
ATOM 25 OP1 C A2091 111.618 119.528 31.649 1.00 67.29 O
ATOM 26 OP2 C A2091 114.146 119.914 31.754 1.00 68.11 O
ATOM 27 O5' C A2091 112.917 118.681 33.574 1.00 65.56 O
TER
ATOM 1 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 2 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C B2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C B2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C B2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C B2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C B2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C B2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C B2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C B2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C B2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C B2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C B2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C B2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C B2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C B2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C B2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C B2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A B2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A B2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A B2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A B2090 116.921 117.958 30.986 1.00 75.32 O
TER
Atoms:
OP1: (118.603,119.328,29.748)
OP2: (119.208,118.253,32.008)
C3': (114.294,116.860,31.623)
C1': (115.236,114.733,31.912)
C5': (116.028,117.592,29.912)
O4': (115.854,115.344,30.783)
C8: (117.502,115.146,32.978)
O2': (112.889,114.906,31.409)
C6: (117.278,113.998,36.299)
C5: (117.202,114.444,34.963)
C4: (115.972,114.353,34.333)
P: (118.474,118.204,30.717)
C4': (115.085,116.511,30.376)
C2': (113.933,115.489,32.166)
C2: (115.022,113.556,36.158)
N1: (116.145,113.568,36.881)
N3: (114.828,113.914,34.883)
N6: (118.409,113.957,37.006)
N7: (118.156,114.965,34.101)
N9: (116.183,114.760,33.033)
O5': (116.921,117.958,30.986)
O3': (113.167,117.646,31.303)
OP2: (119.208,118.253,32.008)
C3': (114.294,116.860,31.623)
C1': (115.236,114.733,31.912)
C5': (116.028,117.592,29.912)
O4': (115.854,115.344,30.783)
C8: (117.502,115.146,32.978)
O2': (112.889,114.906,31.409)
C6: (117.278,113.998,36.299)
C5: (117.202,114.444,34.963)
C4: (115.972,114.353,34.333)
P: (118.474,118.204,30.717)
C4': (115.085,116.511,30.376)
C2': (113.933,115.489,32.166)
C2: (115.022,113.556,36.158)
N1: (116.145,113.568,36.881)
N3: (114.828,113.914,34.883)
N6: (118.409,113.957,37.006)
N7: (118.156,114.965,34.101)
N9: (116.183,114.760,33.033)
O5': (116.921,117.958,30.986)
O3': (113.167,117.646,31.303)
C2: (119.885,111.948,28.955)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
Image (generated by PyMOL):