Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1559:A1558
Extra
PDB:
ATOM 1 O3' C A1558 -38.242 -8.170 15.916 1.00 0.01 O
ATOM 2 P A A1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 3 OP1 A A1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 4 OP2 A A1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 5 O5' A A1559 -39.179 -9.077 18.007 1.00 0.01 O
ATOM 6 C5' A A1559 -40.172 -9.608 18.872 1.00 0.01 C
ATOM 7 C4' A A1559 -39.639 -10.781 19.638 1.00 0.01 C
ATOM 8 O4' A A1559 -39.417 -11.861 18.712 1.00 0.01 O
ATOM 9 C3' A A1559 -38.295 -10.557 20.310 1.00 0.01 C
ATOM 10 O3' A A1559 -38.172 -11.477 21.362 1.00 0.01 O
ATOM 11 C2' A A1559 -37.325 -10.954 19.224 1.00 0.01 C
ATOM 12 O2' A A1559 -36.059 -11.295 19.695 1.00 0.01 O
ATOM 13 C1' A A1559 -38.032 -12.158 18.644 1.00 0.01 C
ATOM 14 N9 A A1559 -37.722 -12.420 17.254 1.00 0.01 N
ATOM 15 C8 A A1559 -37.592 -11.484 16.282 1.00 0.01 C
ATOM 16 N7 A A1559 -37.379 -12.011 15.104 1.00 0.01 N
ATOM 17 C5 A A1559 -37.404 -13.379 15.325 1.00 0.01 C
ATOM 18 C6 A A1559 -37.248 -14.455 14.455 1.00 0.01 C
ATOM 19 N6 A A1559 -37.016 -14.317 13.149 1.00 0.01 N
ATOM 20 N1 A A1559 -37.338 -15.682 14.987 1.00 0.01 N
ATOM 21 C2 A A1559 -37.573 -15.789 16.303 1.00 0.01 C
ATOM 22 N3 A A1559 -37.743 -14.850 17.213 1.00 0.01 N
ATOM 23 C4 A A1559 -37.631 -13.647 16.648 1.00 0.01 C
ATOM 24 P G A1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 25 OP1 G A1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 26 OP2 G A1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 27 O5' G A1560 -36.240 -10.781 22.718 1.00 0.74 O
TER
ATOM 1 O3' C B1557 -33.950 -4.654 12.553 1.00 0.01 O
ATOM 2 P C B1558 -34.861 -3.945 13.642 1.00 0.01 P
ATOM 3 OP1 C B1558 -35.947 -3.264 12.907 1.00 0.01 O
ATOM 4 OP2 C B1558 -33.977 -3.158 14.517 1.00 0.01 O
ATOM 5 O5' C B1558 -35.449 -5.164 14.411 1.00 0.01 O
ATOM 6 C5' C B1558 -36.160 -6.135 13.694 1.00 0.01 C
ATOM 7 C4' C B1558 -36.482 -7.308 14.545 1.00 0.01 C
ATOM 8 O4' C B1558 -35.253 -7.808 15.140 1.00 0.01 O
ATOM 9 C3' C B1558 -37.430 -7.020 15.703 1.00 0.01 C
ATOM 10 O3' C B1558 -38.242 -8.170 15.916 1.00 0.01 O
ATOM 11 C2' C B1558 -36.452 -6.825 16.854 1.00 0.01 C
ATOM 12 O2' C B1558 -36.992 -6.977 18.131 1.00 0.01 O
ATOM 13 C1' C B1558 -35.422 -7.891 16.530 1.00 0.01 C
ATOM 14 N1 C B1558 -34.127 -7.683 17.156 1.00 0.35 N
ATOM 15 C2 C B1558 -33.580 -8.665 17.999 1.00 0.35 C
ATOM 16 O2 C B1558 -34.203 -9.721 18.213 1.00 0.35 O
ATOM 17 N3 C B1558 -32.372 -8.449 18.562 1.00 0.35 N
ATOM 18 C4 C B1558 -31.725 -7.325 18.297 1.00 0.35 C
ATOM 19 N4 C B1558 -30.544 -7.134 18.860 1.00 0.35 N
ATOM 20 C5 C B1558 -32.257 -6.326 17.432 1.00 0.35 C
ATOM 21 C6 C B1558 -33.451 -6.549 16.876 1.00 0.35 C
ATOM 22 P A B1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 23 OP1 A B1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 24 OP2 A B1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 25 O5' A B1559 -39.179 -9.077 18.007 1.00 0.01 O
TER
ATOM 2 P A A1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 3 OP1 A A1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 4 OP2 A A1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 5 O5' A A1559 -39.179 -9.077 18.007 1.00 0.01 O
ATOM 6 C5' A A1559 -40.172 -9.608 18.872 1.00 0.01 C
ATOM 7 C4' A A1559 -39.639 -10.781 19.638 1.00 0.01 C
ATOM 8 O4' A A1559 -39.417 -11.861 18.712 1.00 0.01 O
ATOM 9 C3' A A1559 -38.295 -10.557 20.310 1.00 0.01 C
ATOM 10 O3' A A1559 -38.172 -11.477 21.362 1.00 0.01 O
ATOM 11 C2' A A1559 -37.325 -10.954 19.224 1.00 0.01 C
ATOM 12 O2' A A1559 -36.059 -11.295 19.695 1.00 0.01 O
ATOM 13 C1' A A1559 -38.032 -12.158 18.644 1.00 0.01 C
ATOM 14 N9 A A1559 -37.722 -12.420 17.254 1.00 0.01 N
ATOM 15 C8 A A1559 -37.592 -11.484 16.282 1.00 0.01 C
ATOM 16 N7 A A1559 -37.379 -12.011 15.104 1.00 0.01 N
ATOM 17 C5 A A1559 -37.404 -13.379 15.325 1.00 0.01 C
ATOM 18 C6 A A1559 -37.248 -14.455 14.455 1.00 0.01 C
ATOM 19 N6 A A1559 -37.016 -14.317 13.149 1.00 0.01 N
ATOM 20 N1 A A1559 -37.338 -15.682 14.987 1.00 0.01 N
ATOM 21 C2 A A1559 -37.573 -15.789 16.303 1.00 0.01 C
ATOM 22 N3 A A1559 -37.743 -14.850 17.213 1.00 0.01 N
ATOM 23 C4 A A1559 -37.631 -13.647 16.648 1.00 0.01 C
ATOM 24 P G A1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 25 OP1 G A1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 26 OP2 G A1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 27 O5' G A1560 -36.240 -10.781 22.718 1.00 0.74 O
TER
ATOM 1 O3' C B1557 -33.950 -4.654 12.553 1.00 0.01 O
ATOM 2 P C B1558 -34.861 -3.945 13.642 1.00 0.01 P
ATOM 3 OP1 C B1558 -35.947 -3.264 12.907 1.00 0.01 O
ATOM 4 OP2 C B1558 -33.977 -3.158 14.517 1.00 0.01 O
ATOM 5 O5' C B1558 -35.449 -5.164 14.411 1.00 0.01 O
ATOM 6 C5' C B1558 -36.160 -6.135 13.694 1.00 0.01 C
ATOM 7 C4' C B1558 -36.482 -7.308 14.545 1.00 0.01 C
ATOM 8 O4' C B1558 -35.253 -7.808 15.140 1.00 0.01 O
ATOM 9 C3' C B1558 -37.430 -7.020 15.703 1.00 0.01 C
ATOM 10 O3' C B1558 -38.242 -8.170 15.916 1.00 0.01 O
ATOM 11 C2' C B1558 -36.452 -6.825 16.854 1.00 0.01 C
ATOM 12 O2' C B1558 -36.992 -6.977 18.131 1.00 0.01 O
ATOM 13 C1' C B1558 -35.422 -7.891 16.530 1.00 0.01 C
ATOM 14 N1 C B1558 -34.127 -7.683 17.156 1.00 0.35 N
ATOM 15 C2 C B1558 -33.580 -8.665 17.999 1.00 0.35 C
ATOM 16 O2 C B1558 -34.203 -9.721 18.213 1.00 0.35 O
ATOM 17 N3 C B1558 -32.372 -8.449 18.562 1.00 0.35 N
ATOM 18 C4 C B1558 -31.725 -7.325 18.297 1.00 0.35 C
ATOM 19 N4 C B1558 -30.544 -7.134 18.860 1.00 0.35 N
ATOM 20 C5 C B1558 -32.257 -6.326 17.432 1.00 0.35 C
ATOM 21 C6 C B1558 -33.451 -6.549 16.876 1.00 0.35 C
ATOM 22 P A B1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 23 OP1 A B1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 24 OP2 A B1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 25 O5' A B1559 -39.179 -9.077 18.007 1.00 0.01 O
TER
Atoms:
OP1: (-40.673,-8.705,16.036)
OP2: (-39.704,-6.740,17.321)
C3': (-38.295,-10.557,20.310)
C1': (-38.032,-12.158,18.644)
C5': (-40.172,-9.608,18.872)
O4': (-39.417,-11.861,18.712)
C8: (-37.592,-11.484,16.282)
O2': (-36.059,-11.295,19.695)
C6: (-37.248,-14.455,14.455)
C5: (-37.404,-13.379,15.325)
C4: (-37.631,-13.647,16.648)
P: (-39.562,-8.113,16.821)
C4': (-39.639,-10.781,19.638)
C2': (-37.325,-10.954,19.224)
C2: (-37.573,-15.789,16.303)
N1: (-37.338,-15.682,14.987)
N3: (-37.743,-14.850,17.213)
N6: (-37.016,-14.317,13.149)
N7: (-37.379,-12.011,15.104)
N9: (-37.722,-12.420,17.254)
O5': (-39.179,-9.077,18.007)
O3': (-38.172,-11.477,21.362)
OP2: (-39.704,-6.740,17.321)
C3': (-38.295,-10.557,20.310)
C1': (-38.032,-12.158,18.644)
C5': (-40.172,-9.608,18.872)
O4': (-39.417,-11.861,18.712)
C8: (-37.592,-11.484,16.282)
O2': (-36.059,-11.295,19.695)
C6: (-37.248,-14.455,14.455)
C5: (-37.404,-13.379,15.325)
C4: (-37.631,-13.647,16.648)
P: (-39.562,-8.113,16.821)
C4': (-39.639,-10.781,19.638)
C2': (-37.325,-10.954,19.224)
C2: (-37.573,-15.789,16.303)
N1: (-37.338,-15.682,14.987)
N3: (-37.743,-14.850,17.213)
N6: (-37.016,-14.317,13.149)
N7: (-37.379,-12.011,15.104)
N9: (-37.722,-12.420,17.254)
O5': (-39.179,-9.077,18.007)
O3': (-38.172,-11.477,21.362)
C2: (-33.580,-8.665,17.999)
OP1: (-35.947,-3.264,12.907)
OP2: (-33.977,-3.158,14.517)
C4: (-31.725,-7.325,18.297)
O5': (-35.449,-5.164,14.411)
C3': (-37.430,-7.020,15.703)
C1': (-35.422,-7.891,16.530)
O4': (-35.253,-7.808,15.140)
C5': (-36.160,-6.135,13.694)
P: (-34.861,-3.945,13.642)
O2: (-34.203,-9.721,18.213)
C4': (-36.482,-7.308,14.545)
C2': (-36.452,-6.825,16.854)
O2': (-36.992,-6.977,18.131)
N1: (-34.127,-7.683,17.156)
N3: (-32.372,-8.449,18.562)
N4: (-30.544,-7.134,18.860)
C6: (-33.451,-6.549,16.876)
C5: (-32.257,-6.326,17.432)
O3': (-38.242,-8.170,15.916)
OP1: (-35.947,-3.264,12.907)
OP2: (-33.977,-3.158,14.517)
C4: (-31.725,-7.325,18.297)
O5': (-35.449,-5.164,14.411)
C3': (-37.430,-7.020,15.703)
C1': (-35.422,-7.891,16.530)
O4': (-35.253,-7.808,15.140)
C5': (-36.160,-6.135,13.694)
P: (-34.861,-3.945,13.642)
O2: (-34.203,-9.721,18.213)
C4': (-36.482,-7.308,14.545)
C2': (-36.452,-6.825,16.854)
O2': (-36.992,-6.977,18.131)
N1: (-34.127,-7.683,17.156)
N3: (-32.372,-8.449,18.562)
N4: (-30.544,-7.134,18.860)
C6: (-33.451,-6.549,16.876)
C5: (-32.257,-6.326,17.432)
O3': (-38.242,-8.170,15.916)
Image (generated by PyMOL):