Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD1:A79:A78
Extra
PDB:
ATOM 1 O3' C A 78 5.300 -26.043 24.077 1.00 32.58 O
ATOM 2 P A A 79 6.607 -26.981 24.076 1.00 45.37 P
ATOM 3 OP1 A A 79 7.591 -26.356 23.158 1.00 43.69 O
ATOM 4 OP2 A A 79 6.151 -28.369 23.799 1.00 30.95 O
ATOM 5 O5' A A 79 7.124 -26.871 25.577 1.00 40.63 O
ATOM 6 C5' A A 79 8.210 -26.019 25.914 1.00 39.47 C
ATOM 7 C4' A A 79 8.266 -25.762 27.399 1.00 41.72 C
ATOM 8 O4' A A 79 7.185 -24.870 27.783 1.00 44.50 O
ATOM 9 C3' A A 79 8.079 -26.982 28.288 1.00 39.46 C
ATOM 10 O3' A A 79 9.271 -27.729 28.460 1.00 37.26 O
ATOM 11 C2' A A 79 7.539 -26.377 29.578 1.00 39.15 C
ATOM 12 O2' A A 79 8.587 -25.783 30.331 1.00 42.05 O
ATOM 13 C1' A A 79 6.652 -25.261 29.030 1.00 39.00 C
ATOM 14 N9 A A 79 5.264 -25.711 28.819 1.00 34.59 N
ATOM 15 C8 A A 79 4.688 -26.053 27.620 1.00 35.18 C
ATOM 16 N7 A A 79 3.432 -26.409 27.719 1.00 34.30 N
ATOM 17 C5 A A 79 3.156 -26.291 29.071 1.00 32.33 C
ATOM 18 C6 A A 79 1.986 -26.527 29.809 1.00 31.05 C
ATOM 19 N6 A A 79 0.838 -26.944 29.265 1.00 30.38 N
ATOM 20 N1 A A 79 2.041 -26.314 31.140 1.00 28.44 N
ATOM 21 C2 A A 79 3.196 -25.894 31.674 1.00 33.35 C
ATOM 22 N3 A A 79 4.362 -25.637 31.084 1.00 36.02 N
ATOM 23 C4 A A 79 4.274 -25.858 29.763 1.00 34.24 C
ATOM 24 P U A 80 9.259 -29.327 28.282 1.00 41.14 P
ATOM 25 OP1 U A 80 10.668 -29.757 28.113 1.00 48.56 O
ATOM 26 OP2 U A 80 8.283 -29.642 27.208 1.00 39.11 O
ATOM 27 O5' U A 80 8.702 -29.835 29.682 1.00 41.54 O
TER
ATOM 1 O3' G B 77 4.839 -24.032 18.349 1.00 38.85 O
ATOM 2 P C B 78 4.358 -25.326 19.171 1.00 38.50 P
ATOM 3 OP1 C B 78 5.562 -25.902 19.821 1.00 42.00 O
ATOM 4 OP2 C B 78 3.575 -26.174 18.244 1.00 28.86 O
ATOM 5 O5' C B 78 3.397 -24.696 20.272 1.00 43.19 O
ATOM 6 C5' C B 78 2.870 -25.486 21.325 1.00 34.40 C
ATOM 7 C4' C B 78 3.564 -25.199 22.630 1.00 36.60 C
ATOM 8 O4' C B 78 2.610 -24.606 23.558 1.00 31.20 O
ATOM 9 C3' C B 78 4.137 -26.425 23.339 1.00 32.39 C
ATOM 10 O3' C B 78 5.300 -26.043 24.077 1.00 32.58 O
ATOM 11 C2' C B 78 3.019 -26.783 24.307 1.00 34.58 C
ATOM 12 O2' C B 78 3.422 -27.568 25.408 1.00 40.84 O
ATOM 13 C1' C B 78 2.555 -25.392 24.731 1.00 33.41 C
ATOM 14 N1 C B 78 1.179 -25.348 25.273 1.00 29.61 N
ATOM 15 C2 C B 78 0.918 -24.447 26.307 1.00 26.91 C
ATOM 16 O2 C B 78 1.837 -23.711 26.695 1.00 26.71 O
ATOM 17 N3 C B 78 -0.322 -24.393 26.844 1.00 25.29 N
ATOM 18 C4 C B 78 -1.277 -25.206 26.392 1.00 28.05 C
ATOM 19 N4 C B 78 -2.485 -25.124 26.953 1.00 27.96 N
ATOM 20 C5 C B 78 -1.036 -26.142 25.343 1.00 28.74 C
ATOM 21 C6 C B 78 0.197 -26.185 24.822 1.00 31.33 C
ATOM 22 P A B 79 6.607 -26.981 24.076 1.00 45.37 P
ATOM 23 OP1 A B 79 7.591 -26.356 23.158 1.00 43.69 O
ATOM 24 OP2 A B 79 6.151 -28.369 23.799 1.00 30.95 O
ATOM 25 O5' A B 79 7.124 -26.871 25.577 1.00 40.63 O
TER
ATOM 2 P A A 79 6.607 -26.981 24.076 1.00 45.37 P
ATOM 3 OP1 A A 79 7.591 -26.356 23.158 1.00 43.69 O
ATOM 4 OP2 A A 79 6.151 -28.369 23.799 1.00 30.95 O
ATOM 5 O5' A A 79 7.124 -26.871 25.577 1.00 40.63 O
ATOM 6 C5' A A 79 8.210 -26.019 25.914 1.00 39.47 C
ATOM 7 C4' A A 79 8.266 -25.762 27.399 1.00 41.72 C
ATOM 8 O4' A A 79 7.185 -24.870 27.783 1.00 44.50 O
ATOM 9 C3' A A 79 8.079 -26.982 28.288 1.00 39.46 C
ATOM 10 O3' A A 79 9.271 -27.729 28.460 1.00 37.26 O
ATOM 11 C2' A A 79 7.539 -26.377 29.578 1.00 39.15 C
ATOM 12 O2' A A 79 8.587 -25.783 30.331 1.00 42.05 O
ATOM 13 C1' A A 79 6.652 -25.261 29.030 1.00 39.00 C
ATOM 14 N9 A A 79 5.264 -25.711 28.819 1.00 34.59 N
ATOM 15 C8 A A 79 4.688 -26.053 27.620 1.00 35.18 C
ATOM 16 N7 A A 79 3.432 -26.409 27.719 1.00 34.30 N
ATOM 17 C5 A A 79 3.156 -26.291 29.071 1.00 32.33 C
ATOM 18 C6 A A 79 1.986 -26.527 29.809 1.00 31.05 C
ATOM 19 N6 A A 79 0.838 -26.944 29.265 1.00 30.38 N
ATOM 20 N1 A A 79 2.041 -26.314 31.140 1.00 28.44 N
ATOM 21 C2 A A 79 3.196 -25.894 31.674 1.00 33.35 C
ATOM 22 N3 A A 79 4.362 -25.637 31.084 1.00 36.02 N
ATOM 23 C4 A A 79 4.274 -25.858 29.763 1.00 34.24 C
ATOM 24 P U A 80 9.259 -29.327 28.282 1.00 41.14 P
ATOM 25 OP1 U A 80 10.668 -29.757 28.113 1.00 48.56 O
ATOM 26 OP2 U A 80 8.283 -29.642 27.208 1.00 39.11 O
ATOM 27 O5' U A 80 8.702 -29.835 29.682 1.00 41.54 O
TER
ATOM 1 O3' G B 77 4.839 -24.032 18.349 1.00 38.85 O
ATOM 2 P C B 78 4.358 -25.326 19.171 1.00 38.50 P
ATOM 3 OP1 C B 78 5.562 -25.902 19.821 1.00 42.00 O
ATOM 4 OP2 C B 78 3.575 -26.174 18.244 1.00 28.86 O
ATOM 5 O5' C B 78 3.397 -24.696 20.272 1.00 43.19 O
ATOM 6 C5' C B 78 2.870 -25.486 21.325 1.00 34.40 C
ATOM 7 C4' C B 78 3.564 -25.199 22.630 1.00 36.60 C
ATOM 8 O4' C B 78 2.610 -24.606 23.558 1.00 31.20 O
ATOM 9 C3' C B 78 4.137 -26.425 23.339 1.00 32.39 C
ATOM 10 O3' C B 78 5.300 -26.043 24.077 1.00 32.58 O
ATOM 11 C2' C B 78 3.019 -26.783 24.307 1.00 34.58 C
ATOM 12 O2' C B 78 3.422 -27.568 25.408 1.00 40.84 O
ATOM 13 C1' C B 78 2.555 -25.392 24.731 1.00 33.41 C
ATOM 14 N1 C B 78 1.179 -25.348 25.273 1.00 29.61 N
ATOM 15 C2 C B 78 0.918 -24.447 26.307 1.00 26.91 C
ATOM 16 O2 C B 78 1.837 -23.711 26.695 1.00 26.71 O
ATOM 17 N3 C B 78 -0.322 -24.393 26.844 1.00 25.29 N
ATOM 18 C4 C B 78 -1.277 -25.206 26.392 1.00 28.05 C
ATOM 19 N4 C B 78 -2.485 -25.124 26.953 1.00 27.96 N
ATOM 20 C5 C B 78 -1.036 -26.142 25.343 1.00 28.74 C
ATOM 21 C6 C B 78 0.197 -26.185 24.822 1.00 31.33 C
ATOM 22 P A B 79 6.607 -26.981 24.076 1.00 45.37 P
ATOM 23 OP1 A B 79 7.591 -26.356 23.158 1.00 43.69 O
ATOM 24 OP2 A B 79 6.151 -28.369 23.799 1.00 30.95 O
ATOM 25 O5' A B 79 7.124 -26.871 25.577 1.00 40.63 O
TER
Atoms:
OP1: (7.591,-26.356,23.158)
OP2: (6.151,-28.369,23.799)
C3': (8.079,-26.982,28.288)
C1': (6.652,-25.261,29.030)
C5': (8.210,-26.019,25.914)
O4': (7.185,-24.870,27.783)
C8: (4.688,-26.053,27.620)
O2': (8.587,-25.783,30.331)
C6: (1.986,-26.527,29.809)
C5: (3.156,-26.291,29.071)
C4: (4.274,-25.858,29.763)
P: (6.607,-26.981,24.076)
C4': (8.266,-25.762,27.399)
C2': (7.539,-26.377,29.578)
C2: (3.196,-25.894,31.674)
N1: (2.041,-26.314,31.140)
N3: (4.362,-25.637,31.084)
N6: (0.838,-26.944,29.265)
N7: (3.432,-26.409,27.719)
N9: (5.264,-25.711,28.819)
O5': (7.124,-26.871,25.577)
O3': (9.271,-27.729,28.460)
OP2: (6.151,-28.369,23.799)
C3': (8.079,-26.982,28.288)
C1': (6.652,-25.261,29.030)
C5': (8.210,-26.019,25.914)
O4': (7.185,-24.870,27.783)
C8: (4.688,-26.053,27.620)
O2': (8.587,-25.783,30.331)
C6: (1.986,-26.527,29.809)
C5: (3.156,-26.291,29.071)
C4: (4.274,-25.858,29.763)
P: (6.607,-26.981,24.076)
C4': (8.266,-25.762,27.399)
C2': (7.539,-26.377,29.578)
C2: (3.196,-25.894,31.674)
N1: (2.041,-26.314,31.140)
N3: (4.362,-25.637,31.084)
N6: (0.838,-26.944,29.265)
N7: (3.432,-26.409,27.719)
N9: (5.264,-25.711,28.819)
O5': (7.124,-26.871,25.577)
O3': (9.271,-27.729,28.460)
C2: (0.918,-24.447,26.307)
OP1: (5.562,-25.902,19.821)
OP2: (3.575,-26.174,18.244)
C4: (-1.277,-25.206,26.392)
O5': (3.397,-24.696,20.272)
C3': (4.137,-26.425,23.339)
C1': (2.555,-25.392,24.731)
O4': (2.610,-24.606,23.558)
C5': (2.870,-25.486,21.325)
P: (4.358,-25.326,19.171)
O2: (1.837,-23.711,26.695)
C4': (3.564,-25.199,22.630)
C2': (3.019,-26.783,24.307)
O2': (3.422,-27.568,25.408)
N1: (1.179,-25.348,25.273)
N3: (-0.322,-24.393,26.844)
N4: (-2.485,-25.124,26.953)
C6: (0.197,-26.185,24.822)
C5: (-1.036,-26.142,25.343)
O3': (5.300,-26.043,24.077)
OP1: (5.562,-25.902,19.821)
OP2: (3.575,-26.174,18.244)
C4: (-1.277,-25.206,26.392)
O5': (3.397,-24.696,20.272)
C3': (4.137,-26.425,23.339)
C1': (2.555,-25.392,24.731)
O4': (2.610,-24.606,23.558)
C5': (2.870,-25.486,21.325)
P: (4.358,-25.326,19.171)
O2: (1.837,-23.711,26.695)
C4': (3.564,-25.199,22.630)
C2': (3.019,-26.783,24.307)
O2': (3.422,-27.568,25.408)
N1: (1.179,-25.348,25.273)
N3: (-0.322,-24.393,26.844)
N4: (-2.485,-25.124,26.953)
C6: (0.197,-26.185,24.822)
C5: (-1.036,-26.142,25.343)
O3': (5.300,-26.043,24.077)
Image (generated by PyMOL):