Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02078:02079
Extra
PDB:
ATOM 1 O3' G A2077 107.040 105.614 33.485 1.00 50.48 O
ATOM 2 P C A2078 108.436 106.066 32.817 1.00 49.39 P
ATOM 3 OP1 C A2078 108.249 105.938 31.348 1.00 47.73 O
ATOM 4 OP2 C A2078 109.549 105.351 33.490 1.00 46.31 O
ATOM 5 O5' C A2078 108.561 107.613 33.166 1.00 48.37 O
ATOM 6 C5' C A2078 107.663 108.571 32.579 1.00 48.44 C
ATOM 7 C4' C A2078 107.853 109.922 33.218 1.00 48.69 C
ATOM 8 O4' C A2078 107.558 109.831 34.633 1.00 48.29 O
ATOM 9 C3' C A2078 109.264 110.485 33.171 1.00 48.95 C
ATOM 10 O3' C A2078 109.480 111.102 31.912 1.00 51.38 O
ATOM 11 C2' C A2078 109.238 111.484 34.319 1.00 48.00 C
ATOM 12 O2' C A2078 108.547 112.670 33.974 1.00 49.17 O
ATOM 13 C1' C A2078 108.394 110.727 35.349 1.00 47.15 C
ATOM 14 N1 C A2078 109.164 109.955 36.343 1.00 45.84 N
ATOM 15 C2 C A2078 109.591 110.598 37.515 1.00 45.63 C
ATOM 16 O2 C A2078 109.341 111.806 37.667 1.00 47.84 O
ATOM 17 N3 C A2078 110.269 109.890 38.448 1.00 44.80 N
ATOM 18 C4 C A2078 110.536 108.598 38.240 1.00 44.53 C
ATOM 19 N4 C A2078 111.203 107.937 39.191 1.00 45.36 N
ATOM 20 C5 C A2078 110.129 107.925 37.049 1.00 42.76 C
ATOM 21 C6 C A2078 109.452 108.631 36.139 1.00 43.44 C
ATOM 22 P U A2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 23 OP1 U A2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 24 OP2 U A2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 25 O5' U A2079 111.710 109.856 31.777 1.00 52.52 O
TER
ATOM 1 O3' C B2078 109.480 111.102 31.912 1.00 51.38 O
ATOM 2 P U B2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 3 OP1 U B2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 4 OP2 U B2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 5 O5' U B2079 111.710 109.856 31.777 1.00 52.52 O
ATOM 6 C5' U B2079 112.918 109.438 31.125 1.00 53.01 C
ATOM 7 C4' U B2079 113.507 108.250 31.828 1.00 54.50 C
ATOM 8 O4' U B2079 114.062 108.666 33.103 1.00 54.24 O
ATOM 9 C3' U B2079 112.531 107.119 32.133 1.00 55.93 C
ATOM 10 O3' U B2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 11 C2' U B2079 112.144 107.414 33.582 1.00 55.28 C
ATOM 12 O2' U B2079 111.712 106.277 34.302 1.00 54.28 O
ATOM 13 C1' U B2079 113.478 107.904 34.135 1.00 53.38 C
ATOM 14 N1 U B2079 113.431 108.716 35.359 1.00 51.92 N
ATOM 15 C2 U B2079 113.888 108.126 36.519 1.00 52.57 C
ATOM 16 O2 U B2079 114.242 106.958 36.577 1.00 54.56 O
ATOM 17 N3 U B2079 113.908 108.945 37.618 1.00 52.83 N
ATOM 18 C4 U B2079 113.505 110.254 37.682 1.00 52.28 C
ATOM 19 O4 U B2079 113.654 110.874 38.737 1.00 55.22 O
ATOM 20 C5 U B2079 112.999 110.785 36.452 1.00 50.61 C
ATOM 21 C6 U B2079 112.981 110.018 35.359 1.00 51.06 C
ATOM 22 P G B2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 23 OP1 G B2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 24 OP2 G B2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 25 O5' G B2080 115.059 105.894 30.326 1.00 66.04 O
TER
ATOM 2 P C A2078 108.436 106.066 32.817 1.00 49.39 P
ATOM 3 OP1 C A2078 108.249 105.938 31.348 1.00 47.73 O
ATOM 4 OP2 C A2078 109.549 105.351 33.490 1.00 46.31 O
ATOM 5 O5' C A2078 108.561 107.613 33.166 1.00 48.37 O
ATOM 6 C5' C A2078 107.663 108.571 32.579 1.00 48.44 C
ATOM 7 C4' C A2078 107.853 109.922 33.218 1.00 48.69 C
ATOM 8 O4' C A2078 107.558 109.831 34.633 1.00 48.29 O
ATOM 9 C3' C A2078 109.264 110.485 33.171 1.00 48.95 C
ATOM 10 O3' C A2078 109.480 111.102 31.912 1.00 51.38 O
ATOM 11 C2' C A2078 109.238 111.484 34.319 1.00 48.00 C
ATOM 12 O2' C A2078 108.547 112.670 33.974 1.00 49.17 O
ATOM 13 C1' C A2078 108.394 110.727 35.349 1.00 47.15 C
ATOM 14 N1 C A2078 109.164 109.955 36.343 1.00 45.84 N
ATOM 15 C2 C A2078 109.591 110.598 37.515 1.00 45.63 C
ATOM 16 O2 C A2078 109.341 111.806 37.667 1.00 47.84 O
ATOM 17 N3 C A2078 110.269 109.890 38.448 1.00 44.80 N
ATOM 18 C4 C A2078 110.536 108.598 38.240 1.00 44.53 C
ATOM 19 N4 C A2078 111.203 107.937 39.191 1.00 45.36 N
ATOM 20 C5 C A2078 110.129 107.925 37.049 1.00 42.76 C
ATOM 21 C6 C A2078 109.452 108.631 36.139 1.00 43.44 C
ATOM 22 P U A2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 23 OP1 U A2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 24 OP2 U A2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 25 O5' U A2079 111.710 109.856 31.777 1.00 52.52 O
TER
ATOM 1 O3' C B2078 109.480 111.102 31.912 1.00 51.38 O
ATOM 2 P U B2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 3 OP1 U B2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 4 OP2 U B2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 5 O5' U B2079 111.710 109.856 31.777 1.00 52.52 O
ATOM 6 C5' U B2079 112.918 109.438 31.125 1.00 53.01 C
ATOM 7 C4' U B2079 113.507 108.250 31.828 1.00 54.50 C
ATOM 8 O4' U B2079 114.062 108.666 33.103 1.00 54.24 O
ATOM 9 C3' U B2079 112.531 107.119 32.133 1.00 55.93 C
ATOM 10 O3' U B2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 11 C2' U B2079 112.144 107.414 33.582 1.00 55.28 C
ATOM 12 O2' U B2079 111.712 106.277 34.302 1.00 54.28 O
ATOM 13 C1' U B2079 113.478 107.904 34.135 1.00 53.38 C
ATOM 14 N1 U B2079 113.431 108.716 35.359 1.00 51.92 N
ATOM 15 C2 U B2079 113.888 108.126 36.519 1.00 52.57 C
ATOM 16 O2 U B2079 114.242 106.958 36.577 1.00 54.56 O
ATOM 17 N3 U B2079 113.908 108.945 37.618 1.00 52.83 N
ATOM 18 C4 U B2079 113.505 110.254 37.682 1.00 52.28 C
ATOM 19 O4 U B2079 113.654 110.874 38.737 1.00 55.22 O
ATOM 20 C5 U B2079 112.999 110.785 36.452 1.00 50.61 C
ATOM 21 C6 U B2079 112.981 110.018 35.359 1.00 51.06 C
ATOM 22 P G B2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 23 OP1 G B2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 24 OP2 G B2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 25 O5' G B2080 115.059 105.894 30.326 1.00 66.04 O
TER
Atoms:
C2: (109.591,110.598,37.515)
OP1: (108.249,105.938,31.348)
OP2: (109.549,105.351,33.490)
C4: (110.536,108.598,38.240)
O5': (108.561,107.613,33.166)
C3': (109.264,110.485,33.171)
C1': (108.394,110.727,35.349)
O4': (107.558,109.831,34.633)
C5': (107.663,108.571,32.579)
P: (108.436,106.066,32.817)
O2: (109.341,111.806,37.667)
C4': (107.853,109.922,33.218)
C2': (109.238,111.484,34.319)
O2': (108.547,112.670,33.974)
N1: (109.164,109.955,36.343)
N3: (110.269,109.890,38.448)
N4: (111.203,107.937,39.191)
C6: (109.452,108.631,36.139)
C5: (110.129,107.925,37.049)
O3': (109.480,111.102,31.912)
OP1: (108.249,105.938,31.348)
OP2: (109.549,105.351,33.490)
C4: (110.536,108.598,38.240)
O5': (108.561,107.613,33.166)
C3': (109.264,110.485,33.171)
C1': (108.394,110.727,35.349)
O4': (107.558,109.831,34.633)
C5': (107.663,108.571,32.579)
P: (108.436,106.066,32.817)
O2: (109.341,111.806,37.667)
C4': (107.853,109.922,33.218)
C2': (109.238,111.484,34.319)
O2': (108.547,112.670,33.974)
N1: (109.164,109.955,36.343)
N3: (110.269,109.890,38.448)
N4: (111.203,107.937,39.191)
C6: (109.452,108.631,36.139)
C5: (110.129,107.925,37.049)
O3': (109.480,111.102,31.912)
C4: (113.505,110.254,37.682)
N3: (113.908,108.945,37.618)
OP1: (111.645,112.344,31.847)
OP2: (110.810,111.035,29.796)
C2: (113.888,108.126,36.519)
C1': (113.478,107.904,34.135)
C3': (112.531,107.119,32.133)
O5': (111.710,109.856,31.777)
O4': (114.062,108.666,33.103)
C5': (112.918,109.438,31.125)
P: (110.955,111.159,31.273)
C4': (113.507,108.250,31.828)
C2': (112.144,107.414,33.582)
O2': (111.712,106.277,34.302)
N1: (113.431,108.716,35.359)
O4: (113.654,110.874,38.737)
O2: (114.242,106.958,36.577)
C6: (112.981,110.018,35.359)
C5: (112.999,110.785,36.452)
O3': (113.242,105.888,32.076)
N3: (113.908,108.945,37.618)
OP1: (111.645,112.344,31.847)
OP2: (110.810,111.035,29.796)
C2: (113.888,108.126,36.519)
C1': (113.478,107.904,34.135)
C3': (112.531,107.119,32.133)
O5': (111.710,109.856,31.777)
O4': (114.062,108.666,33.103)
C5': (112.918,109.438,31.125)
P: (110.955,111.159,31.273)
C4': (113.507,108.250,31.828)
C2': (112.144,107.414,33.582)
O2': (111.712,106.277,34.302)
N1: (113.431,108.716,35.359)
O4: (113.654,110.874,38.737)
O2: (114.242,106.958,36.577)
C6: (112.981,110.018,35.359)
C5: (112.999,110.785,36.452)
O3': (113.242,105.888,32.076)
Image (generated by PyMOL):