Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02334:02333
Extra
PDB:
ATOM 1 O3' U A2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C A2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C A2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C A2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C A2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C A2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C A2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C A2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C A2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C A2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C A2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C A2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C A2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C A2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C A2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C A2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C A2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C A2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C A2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C A2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C A2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G A2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G A2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G A2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G A2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 1 O3' G B2332 55.014 103.886 113.857 1.00 42.80 O
ATOM 2 P U B2333 55.529 103.858 115.386 1.00 42.00 P
ATOM 3 OP1 U B2333 54.460 103.187 116.164 1.00 38.39 O
ATOM 4 OP2 U B2333 55.964 105.222 115.767 1.00 40.64 O
ATOM 5 O5' U B2333 56.841 102.948 115.335 1.00 41.92 O
ATOM 6 C5' U B2333 56.815 101.621 114.778 1.00 41.59 C
ATOM 7 C4' U B2333 58.224 101.122 114.547 1.00 42.82 C
ATOM 8 O4' U B2333 58.883 101.975 113.581 1.00 44.13 O
ATOM 9 C3' U B2333 59.160 101.143 115.741 1.00 42.69 C
ATOM 10 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 11 C2' U B2333 60.532 101.154 115.082 1.00 42.96 C
ATOM 12 O2' U B2333 60.927 99.875 114.638 1.00 43.41 O
ATOM 13 C1' U B2333 60.271 102.019 113.850 1.00 43.09 C
ATOM 14 N1 U B2333 60.676 103.429 113.944 1.00 45.11 N
ATOM 15 C2 U B2333 62.018 103.744 113.739 1.00 45.89 C
ATOM 16 O2 U B2333 62.891 102.902 113.593 1.00 46.33 O
ATOM 17 N3 U B2333 62.299 105.087 113.729 1.00 45.93 N
ATOM 18 C4 U B2333 61.412 106.123 113.927 1.00 46.08 C
ATOM 19 O4 U B2333 61.801 107.284 113.791 1.00 47.32 O
ATOM 20 C5 U B2333 60.064 105.714 114.192 1.00 45.64 C
ATOM 21 C6 U B2333 59.750 104.418 114.190 1.00 44.64 C
ATOM 22 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 23 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 24 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 25 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
TER
ATOM 2 P C A2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C A2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C A2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C A2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C A2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C A2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C A2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C A2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C A2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C A2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C A2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C A2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C A2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C A2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C A2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C A2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C A2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C A2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C A2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C A2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G A2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G A2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G A2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G A2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 1 O3' G B2332 55.014 103.886 113.857 1.00 42.80 O
ATOM 2 P U B2333 55.529 103.858 115.386 1.00 42.00 P
ATOM 3 OP1 U B2333 54.460 103.187 116.164 1.00 38.39 O
ATOM 4 OP2 U B2333 55.964 105.222 115.767 1.00 40.64 O
ATOM 5 O5' U B2333 56.841 102.948 115.335 1.00 41.92 O
ATOM 6 C5' U B2333 56.815 101.621 114.778 1.00 41.59 C
ATOM 7 C4' U B2333 58.224 101.122 114.547 1.00 42.82 C
ATOM 8 O4' U B2333 58.883 101.975 113.581 1.00 44.13 O
ATOM 9 C3' U B2333 59.160 101.143 115.741 1.00 42.69 C
ATOM 10 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 11 C2' U B2333 60.532 101.154 115.082 1.00 42.96 C
ATOM 12 O2' U B2333 60.927 99.875 114.638 1.00 43.41 O
ATOM 13 C1' U B2333 60.271 102.019 113.850 1.00 43.09 C
ATOM 14 N1 U B2333 60.676 103.429 113.944 1.00 45.11 N
ATOM 15 C2 U B2333 62.018 103.744 113.739 1.00 45.89 C
ATOM 16 O2 U B2333 62.891 102.902 113.593 1.00 46.33 O
ATOM 17 N3 U B2333 62.299 105.087 113.729 1.00 45.93 N
ATOM 18 C4 U B2333 61.412 106.123 113.927 1.00 46.08 C
ATOM 19 O4 U B2333 61.801 107.284 113.791 1.00 47.32 O
ATOM 20 C5 U B2333 60.064 105.714 114.192 1.00 45.64 C
ATOM 21 C6 U B2333 59.750 104.418 114.190 1.00 44.64 C
ATOM 22 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 23 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 24 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 25 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
TER
Atoms:
C2: (61.950,104.003,117.763)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
C4: (61.412,106.123,113.927)
N3: (62.299,105.087,113.729)
OP1: (54.460,103.187,116.164)
OP2: (55.964,105.222,115.767)
C2: (62.018,103.744,113.739)
C1': (60.271,102.019,113.850)
C3': (59.160,101.143,115.741)
O5': (56.841,102.948,115.335)
O4': (58.883,101.975,113.581)
C5': (56.815,101.621,114.778)
P: (55.529,103.858,115.386)
C4': (58.224,101.122,114.547)
C2': (60.532,101.154,115.082)
O2': (60.927,99.875,114.638)
N1: (60.676,103.429,113.944)
O4: (61.801,107.284,113.791)
O2: (62.891,102.902,113.593)
C6: (59.750,104.418,114.190)
C5: (60.064,105.714,114.192)
O3': (58.975,99.983,116.540)
N3: (62.299,105.087,113.729)
OP1: (54.460,103.187,116.164)
OP2: (55.964,105.222,115.767)
C2: (62.018,103.744,113.739)
C1': (60.271,102.019,113.850)
C3': (59.160,101.143,115.741)
O5': (56.841,102.948,115.335)
O4': (58.883,101.975,113.581)
C5': (56.815,101.621,114.778)
P: (55.529,103.858,115.386)
C4': (58.224,101.122,114.547)
C2': (60.532,101.154,115.082)
O2': (60.927,99.875,114.638)
N1: (60.676,103.429,113.944)
O4: (61.801,107.284,113.791)
O2: (62.891,102.902,113.593)
C6: (59.750,104.418,114.190)
C5: (60.064,105.714,114.192)
O3': (58.975,99.983,116.540)
Image (generated by PyMOL):