Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01852:01897
Extra
PDB:
ATOM 1 O3' C A1851 118.997 102.233 87.906 1.00 59.63 O
ATOM 2 P C A1852 119.704 102.261 86.460 1.00 60.66 P
ATOM 3 OP1 C A1852 120.135 100.864 86.174 1.00 59.62 O
ATOM 4 OP2 C A1852 120.711 103.353 86.428 1.00 60.64 O
ATOM 5 O5' C A1852 118.523 102.643 85.462 1.00 59.43 O
ATOM 6 C5' C A1852 117.326 101.843 85.400 1.00 59.38 C
ATOM 7 C4' C A1852 116.930 101.601 83.964 1.00 59.00 C
ATOM 8 O4' C A1852 116.395 102.825 83.389 1.00 57.77 O
ATOM 9 C3' C A1852 118.061 101.157 83.039 1.00 58.94 C
ATOM 10 O3' C A1852 117.531 100.309 82.025 1.00 61.93 O
ATOM 11 C2' C A1852 118.475 102.472 82.385 1.00 58.40 C
ATOM 12 O2' C A1852 119.117 102.279 81.144 1.00 56.89 O
ATOM 13 C1' C A1852 117.107 103.131 82.206 1.00 57.74 C
ATOM 14 N1 C A1852 117.035 104.589 81.980 1.00 56.98 N
ATOM 15 C2 C A1852 115.883 105.105 81.365 1.00 55.00 C
ATOM 16 O2 C A1852 114.997 104.323 80.999 1.00 53.86 O
ATOM 17 N3 C A1852 115.763 106.437 81.190 1.00 53.68 N
ATOM 18 C4 C A1852 116.731 107.252 81.598 1.00 55.19 C
ATOM 19 N4 C A1852 116.545 108.561 81.434 1.00 53.85 N
ATOM 20 C5 C A1852 117.930 106.761 82.201 1.00 56.14 C
ATOM 21 C6 C A1852 118.041 105.433 82.369 1.00 56.38 C
ATOM 22 P A A1853 117.759 98.721 82.101 1.00 62.29 P
ATOM 23 OP1 A A1853 118.855 98.424 83.061 1.00 63.60 O
ATOM 24 OP2 A A1853 117.873 98.265 80.695 1.00 62.68 O
ATOM 25 O5' A A1853 116.392 98.155 82.702 1.00 62.08 O
TER
ATOM 1 O3' G B1896 124.103 106.773 78.130 1.00 55.70 O
ATOM 2 P U B1897 123.562 107.122 79.603 1.00 56.99 P
ATOM 3 OP1 U B1897 124.552 108.044 80.216 1.00 57.30 O
ATOM 4 OP2 U B1897 123.192 105.865 80.308 1.00 55.33 O
ATOM 5 O5' U B1897 122.231 107.945 79.323 1.00 56.16 O
ATOM 6 C5' U B1897 122.301 109.252 78.734 1.00 55.10 C
ATOM 7 C4' U B1897 120.916 109.784 78.477 1.00 53.72 C
ATOM 8 O4' U B1897 120.241 108.926 77.525 1.00 52.19 O
ATOM 9 C3' U B1897 119.975 109.823 79.671 1.00 52.11 C
ATOM 10 O3' U B1897 120.203 110.987 80.464 1.00 51.95 O
ATOM 11 C2' U B1897 118.618 109.864 78.988 1.00 50.81 C
ATOM 12 O2' U B1897 118.337 111.153 78.489 1.00 49.56 O
ATOM 13 C1' U B1897 118.851 108.924 77.801 1.00 52.37 C
ATOM 14 N1 U B1897 118.421 107.540 78.045 1.00 53.19 N
ATOM 15 C2 U B1897 117.093 107.225 77.812 1.00 53.58 C
ATOM 16 O2 U B1897 116.270 108.044 77.429 1.00 53.63 O
ATOM 17 N3 U B1897 116.763 105.914 78.047 1.00 52.00 N
ATOM 18 C4 U B1897 117.601 104.912 78.486 1.00 51.56 C
ATOM 19 O4 U B1897 117.155 103.783 78.645 1.00 52.42 O
ATOM 20 C5 U B1897 118.948 105.315 78.715 1.00 52.11 C
ATOM 21 C6 U B1897 119.306 106.582 78.490 1.00 53.90 C
ATOM 22 P C B1898 119.887 110.961 82.043 1.00 50.40 P
ATOM 23 OP1 C B1898 120.408 112.244 82.589 1.00 52.60 O
ATOM 24 OP2 C B1898 120.337 109.675 82.630 1.00 48.85 O
ATOM 25 O5' C B1898 118.301 111.006 82.129 1.00 49.83 O
TER
ATOM 2 P C A1852 119.704 102.261 86.460 1.00 60.66 P
ATOM 3 OP1 C A1852 120.135 100.864 86.174 1.00 59.62 O
ATOM 4 OP2 C A1852 120.711 103.353 86.428 1.00 60.64 O
ATOM 5 O5' C A1852 118.523 102.643 85.462 1.00 59.43 O
ATOM 6 C5' C A1852 117.326 101.843 85.400 1.00 59.38 C
ATOM 7 C4' C A1852 116.930 101.601 83.964 1.00 59.00 C
ATOM 8 O4' C A1852 116.395 102.825 83.389 1.00 57.77 O
ATOM 9 C3' C A1852 118.061 101.157 83.039 1.00 58.94 C
ATOM 10 O3' C A1852 117.531 100.309 82.025 1.00 61.93 O
ATOM 11 C2' C A1852 118.475 102.472 82.385 1.00 58.40 C
ATOM 12 O2' C A1852 119.117 102.279 81.144 1.00 56.89 O
ATOM 13 C1' C A1852 117.107 103.131 82.206 1.00 57.74 C
ATOM 14 N1 C A1852 117.035 104.589 81.980 1.00 56.98 N
ATOM 15 C2 C A1852 115.883 105.105 81.365 1.00 55.00 C
ATOM 16 O2 C A1852 114.997 104.323 80.999 1.00 53.86 O
ATOM 17 N3 C A1852 115.763 106.437 81.190 1.00 53.68 N
ATOM 18 C4 C A1852 116.731 107.252 81.598 1.00 55.19 C
ATOM 19 N4 C A1852 116.545 108.561 81.434 1.00 53.85 N
ATOM 20 C5 C A1852 117.930 106.761 82.201 1.00 56.14 C
ATOM 21 C6 C A1852 118.041 105.433 82.369 1.00 56.38 C
ATOM 22 P A A1853 117.759 98.721 82.101 1.00 62.29 P
ATOM 23 OP1 A A1853 118.855 98.424 83.061 1.00 63.60 O
ATOM 24 OP2 A A1853 117.873 98.265 80.695 1.00 62.68 O
ATOM 25 O5' A A1853 116.392 98.155 82.702 1.00 62.08 O
TER
ATOM 1 O3' G B1896 124.103 106.773 78.130 1.00 55.70 O
ATOM 2 P U B1897 123.562 107.122 79.603 1.00 56.99 P
ATOM 3 OP1 U B1897 124.552 108.044 80.216 1.00 57.30 O
ATOM 4 OP2 U B1897 123.192 105.865 80.308 1.00 55.33 O
ATOM 5 O5' U B1897 122.231 107.945 79.323 1.00 56.16 O
ATOM 6 C5' U B1897 122.301 109.252 78.734 1.00 55.10 C
ATOM 7 C4' U B1897 120.916 109.784 78.477 1.00 53.72 C
ATOM 8 O4' U B1897 120.241 108.926 77.525 1.00 52.19 O
ATOM 9 C3' U B1897 119.975 109.823 79.671 1.00 52.11 C
ATOM 10 O3' U B1897 120.203 110.987 80.464 1.00 51.95 O
ATOM 11 C2' U B1897 118.618 109.864 78.988 1.00 50.81 C
ATOM 12 O2' U B1897 118.337 111.153 78.489 1.00 49.56 O
ATOM 13 C1' U B1897 118.851 108.924 77.801 1.00 52.37 C
ATOM 14 N1 U B1897 118.421 107.540 78.045 1.00 53.19 N
ATOM 15 C2 U B1897 117.093 107.225 77.812 1.00 53.58 C
ATOM 16 O2 U B1897 116.270 108.044 77.429 1.00 53.63 O
ATOM 17 N3 U B1897 116.763 105.914 78.047 1.00 52.00 N
ATOM 18 C4 U B1897 117.601 104.912 78.486 1.00 51.56 C
ATOM 19 O4 U B1897 117.155 103.783 78.645 1.00 52.42 O
ATOM 20 C5 U B1897 118.948 105.315 78.715 1.00 52.11 C
ATOM 21 C6 U B1897 119.306 106.582 78.490 1.00 53.90 C
ATOM 22 P C B1898 119.887 110.961 82.043 1.00 50.40 P
ATOM 23 OP1 C B1898 120.408 112.244 82.589 1.00 52.60 O
ATOM 24 OP2 C B1898 120.337 109.675 82.630 1.00 48.85 O
ATOM 25 O5' C B1898 118.301 111.006 82.129 1.00 49.83 O
TER
Atoms:
C2: (115.883,105.105,81.365)
OP1: (120.135,100.864,86.174)
OP2: (120.711,103.353,86.428)
C4: (116.731,107.252,81.598)
O5': (118.523,102.643,85.462)
C3': (118.061,101.157,83.039)
C1': (117.107,103.131,82.206)
O4': (116.395,102.825,83.389)
C5': (117.326,101.843,85.400)
P: (119.704,102.261,86.460)
O2: (114.997,104.323,80.999)
C4': (116.930,101.601,83.964)
C2': (118.475,102.472,82.385)
O2': (119.117,102.279,81.144)
N1: (117.035,104.589,81.980)
N3: (115.763,106.437,81.190)
N4: (116.545,108.561,81.434)
C6: (118.041,105.433,82.369)
C5: (117.930,106.761,82.201)
O3': (117.531,100.309,82.025)
OP1: (120.135,100.864,86.174)
OP2: (120.711,103.353,86.428)
C4: (116.731,107.252,81.598)
O5': (118.523,102.643,85.462)
C3': (118.061,101.157,83.039)
C1': (117.107,103.131,82.206)
O4': (116.395,102.825,83.389)
C5': (117.326,101.843,85.400)
P: (119.704,102.261,86.460)
O2: (114.997,104.323,80.999)
C4': (116.930,101.601,83.964)
C2': (118.475,102.472,82.385)
O2': (119.117,102.279,81.144)
N1: (117.035,104.589,81.980)
N3: (115.763,106.437,81.190)
N4: (116.545,108.561,81.434)
C6: (118.041,105.433,82.369)
C5: (117.930,106.761,82.201)
O3': (117.531,100.309,82.025)
C4: (117.601,104.912,78.486)
N3: (116.763,105.914,78.047)
OP1: (124.552,108.044,80.216)
OP2: (123.192,105.865,80.308)
C2: (117.093,107.225,77.812)
C1': (118.851,108.924,77.801)
C3': (119.975,109.823,79.671)
O5': (122.231,107.945,79.323)
O4': (120.241,108.926,77.525)
C5': (122.301,109.252,78.734)
P: (123.562,107.122,79.603)
C4': (120.916,109.784,78.477)
C2': (118.618,109.864,78.988)
O2': (118.337,111.153,78.489)
N1: (118.421,107.540,78.045)
O4: (117.155,103.783,78.645)
O2: (116.270,108.044,77.429)
C6: (119.306,106.582,78.490)
C5: (118.948,105.315,78.715)
O3': (120.203,110.987,80.464)
N3: (116.763,105.914,78.047)
OP1: (124.552,108.044,80.216)
OP2: (123.192,105.865,80.308)
C2: (117.093,107.225,77.812)
C1': (118.851,108.924,77.801)
C3': (119.975,109.823,79.671)
O5': (122.231,107.945,79.323)
O4': (120.241,108.926,77.525)
C5': (122.301,109.252,78.734)
P: (123.562,107.122,79.603)
C4': (120.916,109.784,78.477)
C2': (118.618,109.864,78.988)
O2': (118.337,111.153,78.489)
N1: (118.421,107.540,78.045)
O4: (117.155,103.783,78.645)
O2: (116.270,108.044,77.429)
C6: (119.306,106.582,78.490)
C5: (118.948,105.315,78.715)
O3': (120.203,110.987,80.464)
Image (generated by PyMOL):