Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A400:A398
Extra
PDB:
ATOM 1 O3' U A 399 85.068 -49.001 -67.083 1.00 45.66 O
ATOM 2 P C A 400 84.441 -47.512 -66.983 1.00 56.54 P
ATOM 3 OP1 C A 400 84.147 -47.245 -65.544 1.00 62.04 O
ATOM 4 OP2 C A 400 83.359 -47.369 -67.999 1.00 63.37 O
ATOM 5 O5' C A 400 85.607 -46.517 -67.415 1.00 50.46 O
ATOM 6 C5' C A 400 86.627 -46.144 -66.497 1.00 52.67 C
ATOM 7 C4' C A 400 87.525 -45.139 -67.141 1.00 46.99 C
ATOM 8 O4' C A 400 87.953 -45.679 -68.408 1.00 46.03 O
ATOM 9 C3' C A 400 86.855 -43.820 -67.481 1.00 48.52 C
ATOM 10 O3' C A 400 87.055 -43.004 -66.339 1.00 45.03 O
ATOM 11 C2' C A 400 87.662 -43.323 -68.686 1.00 55.44 C
ATOM 12 O2' C A 400 88.842 -42.619 -68.373 1.00 56.76 O
ATOM 13 C1' C A 400 88.121 -44.625 -69.334 1.00 49.25 C
ATOM 14 N1 C A 400 87.461 -44.986 -70.594 1.00 52.05 N
ATOM 15 C2 C A 400 87.743 -44.238 -71.764 1.00 55.94 C
ATOM 16 O2 C A 400 88.494 -43.256 -71.696 1.00 58.86 O
ATOM 17 N3 C A 400 87.185 -44.617 -72.930 1.00 50.14 N
ATOM 18 C4 C A 400 86.380 -45.687 -72.969 1.00 50.66 C
ATOM 19 N4 C A 400 85.879 -46.060 -74.153 1.00 55.30 N
ATOM 20 C5 C A 400 86.057 -46.433 -71.796 1.00 50.76 C
ATOM 21 C6 C A 400 86.608 -46.051 -70.646 1.00 51.95 C
ATOM 22 P G A 401 86.056 -41.792 -65.976 1.00 59.98 P
ATOM 23 OP1 G A 401 84.779 -42.345 -65.450 1.00 73.28 O
ATOM 24 OP2 G A 401 86.027 -40.768 -67.067 1.00 56.55 O
ATOM 25 O5' G A 401 86.871 -41.140 -64.772 1.00 48.23 O
TER
ATOM 1 O3' G B 397 77.348 -46.797 -68.326 1.00 51.86 O
ATOM 2 P U B 398 78.526 -47.821 -67.961 1.00 52.64 P
ATOM 3 OP1 U B 398 78.062 -49.233 -68.137 1.00 41.45 O
ATOM 4 OP2 U B 398 78.973 -47.348 -66.614 1.00 33.60 O
ATOM 5 O5' U B 398 79.641 -47.527 -69.077 1.00 55.13 O
ATOM 6 C5' U B 398 79.343 -47.599 -70.492 1.00 50.37 C
ATOM 7 C4' U B 398 80.604 -47.396 -71.335 1.00 49.16 C
ATOM 8 O4' U B 398 81.098 -46.028 -71.318 1.00 42.65 O
ATOM 9 C3' U B 398 81.832 -48.198 -70.930 1.00 50.76 C
ATOM 10 O3' U B 398 81.756 -49.522 -71.467 1.00 53.00 O
ATOM 11 C2' U B 398 83.009 -47.423 -71.543 1.00 44.64 C
ATOM 12 O2' U B 398 83.486 -48.048 -72.713 1.00 43.24 O
ATOM 13 C1' U B 398 82.398 -46.045 -71.867 1.00 45.55 C
ATOM 14 N1 U B 398 83.163 -44.825 -71.507 1.00 54.09 N
ATOM 15 C2 U B 398 83.431 -43.877 -72.537 1.00 51.08 C
ATOM 16 O2 U B 398 83.049 -44.004 -73.698 1.00 48.58 O
ATOM 17 N3 U B 398 84.173 -42.782 -72.155 1.00 50.30 N
ATOM 18 C4 U B 398 84.699 -42.516 -70.908 1.00 52.23 C
ATOM 19 O4 U B 398 85.423 -41.519 -70.759 1.00 54.45 O
ATOM 20 C5 U B 398 84.393 -43.506 -69.902 1.00 53.31 C
ATOM 21 C6 U B 398 83.649 -44.598 -70.223 1.00 55.17 C
ATOM 22 P U B 399 81.993 -50.800 -70.512 1.00 51.97 P
ATOM 23 OP1 U B 399 82.061 -52.008 -71.376 1.00 41.01 O
ATOM 24 OP2 U B 399 81.043 -50.761 -69.357 1.00 44.64 O
ATOM 25 O5' U B 399 83.456 -50.575 -69.922 1.00 47.54 O
TER
ATOM 2 P C A 400 84.441 -47.512 -66.983 1.00 56.54 P
ATOM 3 OP1 C A 400 84.147 -47.245 -65.544 1.00 62.04 O
ATOM 4 OP2 C A 400 83.359 -47.369 -67.999 1.00 63.37 O
ATOM 5 O5' C A 400 85.607 -46.517 -67.415 1.00 50.46 O
ATOM 6 C5' C A 400 86.627 -46.144 -66.497 1.00 52.67 C
ATOM 7 C4' C A 400 87.525 -45.139 -67.141 1.00 46.99 C
ATOM 8 O4' C A 400 87.953 -45.679 -68.408 1.00 46.03 O
ATOM 9 C3' C A 400 86.855 -43.820 -67.481 1.00 48.52 C
ATOM 10 O3' C A 400 87.055 -43.004 -66.339 1.00 45.03 O
ATOM 11 C2' C A 400 87.662 -43.323 -68.686 1.00 55.44 C
ATOM 12 O2' C A 400 88.842 -42.619 -68.373 1.00 56.76 O
ATOM 13 C1' C A 400 88.121 -44.625 -69.334 1.00 49.25 C
ATOM 14 N1 C A 400 87.461 -44.986 -70.594 1.00 52.05 N
ATOM 15 C2 C A 400 87.743 -44.238 -71.764 1.00 55.94 C
ATOM 16 O2 C A 400 88.494 -43.256 -71.696 1.00 58.86 O
ATOM 17 N3 C A 400 87.185 -44.617 -72.930 1.00 50.14 N
ATOM 18 C4 C A 400 86.380 -45.687 -72.969 1.00 50.66 C
ATOM 19 N4 C A 400 85.879 -46.060 -74.153 1.00 55.30 N
ATOM 20 C5 C A 400 86.057 -46.433 -71.796 1.00 50.76 C
ATOM 21 C6 C A 400 86.608 -46.051 -70.646 1.00 51.95 C
ATOM 22 P G A 401 86.056 -41.792 -65.976 1.00 59.98 P
ATOM 23 OP1 G A 401 84.779 -42.345 -65.450 1.00 73.28 O
ATOM 24 OP2 G A 401 86.027 -40.768 -67.067 1.00 56.55 O
ATOM 25 O5' G A 401 86.871 -41.140 -64.772 1.00 48.23 O
TER
ATOM 1 O3' G B 397 77.348 -46.797 -68.326 1.00 51.86 O
ATOM 2 P U B 398 78.526 -47.821 -67.961 1.00 52.64 P
ATOM 3 OP1 U B 398 78.062 -49.233 -68.137 1.00 41.45 O
ATOM 4 OP2 U B 398 78.973 -47.348 -66.614 1.00 33.60 O
ATOM 5 O5' U B 398 79.641 -47.527 -69.077 1.00 55.13 O
ATOM 6 C5' U B 398 79.343 -47.599 -70.492 1.00 50.37 C
ATOM 7 C4' U B 398 80.604 -47.396 -71.335 1.00 49.16 C
ATOM 8 O4' U B 398 81.098 -46.028 -71.318 1.00 42.65 O
ATOM 9 C3' U B 398 81.832 -48.198 -70.930 1.00 50.76 C
ATOM 10 O3' U B 398 81.756 -49.522 -71.467 1.00 53.00 O
ATOM 11 C2' U B 398 83.009 -47.423 -71.543 1.00 44.64 C
ATOM 12 O2' U B 398 83.486 -48.048 -72.713 1.00 43.24 O
ATOM 13 C1' U B 398 82.398 -46.045 -71.867 1.00 45.55 C
ATOM 14 N1 U B 398 83.163 -44.825 -71.507 1.00 54.09 N
ATOM 15 C2 U B 398 83.431 -43.877 -72.537 1.00 51.08 C
ATOM 16 O2 U B 398 83.049 -44.004 -73.698 1.00 48.58 O
ATOM 17 N3 U B 398 84.173 -42.782 -72.155 1.00 50.30 N
ATOM 18 C4 U B 398 84.699 -42.516 -70.908 1.00 52.23 C
ATOM 19 O4 U B 398 85.423 -41.519 -70.759 1.00 54.45 O
ATOM 20 C5 U B 398 84.393 -43.506 -69.902 1.00 53.31 C
ATOM 21 C6 U B 398 83.649 -44.598 -70.223 1.00 55.17 C
ATOM 22 P U B 399 81.993 -50.800 -70.512 1.00 51.97 P
ATOM 23 OP1 U B 399 82.061 -52.008 -71.376 1.00 41.01 O
ATOM 24 OP2 U B 399 81.043 -50.761 -69.357 1.00 44.64 O
ATOM 25 O5' U B 399 83.456 -50.575 -69.922 1.00 47.54 O
TER
Atoms:
C2: (87.743,-44.238,-71.764)
OP1: (84.147,-47.245,-65.544)
OP2: (83.359,-47.369,-67.999)
C4: (86.380,-45.687,-72.969)
O5': (85.607,-46.517,-67.415)
C3': (86.855,-43.820,-67.481)
C1': (88.121,-44.625,-69.334)
O4': (87.953,-45.679,-68.408)
C5': (86.627,-46.144,-66.497)
P: (84.441,-47.512,-66.983)
O2: (88.494,-43.256,-71.696)
C4': (87.525,-45.139,-67.141)
C2': (87.662,-43.323,-68.686)
O2': (88.842,-42.619,-68.373)
N1: (87.461,-44.986,-70.594)
N3: (87.185,-44.617,-72.930)
N4: (85.879,-46.060,-74.153)
C6: (86.608,-46.051,-70.646)
C5: (86.057,-46.433,-71.796)
O3': (87.055,-43.004,-66.339)
OP1: (84.147,-47.245,-65.544)
OP2: (83.359,-47.369,-67.999)
C4: (86.380,-45.687,-72.969)
O5': (85.607,-46.517,-67.415)
C3': (86.855,-43.820,-67.481)
C1': (88.121,-44.625,-69.334)
O4': (87.953,-45.679,-68.408)
C5': (86.627,-46.144,-66.497)
P: (84.441,-47.512,-66.983)
O2: (88.494,-43.256,-71.696)
C4': (87.525,-45.139,-67.141)
C2': (87.662,-43.323,-68.686)
O2': (88.842,-42.619,-68.373)
N1: (87.461,-44.986,-70.594)
N3: (87.185,-44.617,-72.930)
N4: (85.879,-46.060,-74.153)
C6: (86.608,-46.051,-70.646)
C5: (86.057,-46.433,-71.796)
O3': (87.055,-43.004,-66.339)
C4: (84.699,-42.516,-70.908)
N3: (84.173,-42.782,-72.155)
OP1: (78.062,-49.233,-68.137)
OP2: (78.973,-47.348,-66.614)
C2: (83.431,-43.877,-72.537)
C1': (82.398,-46.045,-71.867)
C3': (81.832,-48.198,-70.930)
O5': (79.641,-47.527,-69.077)
O4': (81.098,-46.028,-71.318)
C5': (79.343,-47.599,-70.492)
P: (78.526,-47.821,-67.961)
C4': (80.604,-47.396,-71.335)
C2': (83.009,-47.423,-71.543)
O2': (83.486,-48.048,-72.713)
N1: (83.163,-44.825,-71.507)
O4: (85.423,-41.519,-70.759)
O2: (83.049,-44.004,-73.698)
C6: (83.649,-44.598,-70.223)
C5: (84.393,-43.506,-69.902)
O3': (81.756,-49.522,-71.467)
N3: (84.173,-42.782,-72.155)
OP1: (78.062,-49.233,-68.137)
OP2: (78.973,-47.348,-66.614)
C2: (83.431,-43.877,-72.537)
C1': (82.398,-46.045,-71.867)
C3': (81.832,-48.198,-70.930)
O5': (79.641,-47.527,-69.077)
O4': (81.098,-46.028,-71.318)
C5': (79.343,-47.599,-70.492)
P: (78.526,-47.821,-67.961)
C4': (80.604,-47.396,-71.335)
C2': (83.009,-47.423,-71.543)
O2': (83.486,-48.048,-72.713)
N1: (83.163,-44.825,-71.507)
O4: (85.423,-41.519,-70.759)
O2: (83.049,-44.004,-73.698)
C6: (83.649,-44.598,-70.223)
C5: (84.393,-43.506,-69.902)
O3': (81.756,-49.522,-71.467)
Image (generated by PyMOL):