Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01828:01829
Extra
PDB:
ATOM 1 O3' A A1827 105.052 135.872 57.818 1.00 33.40 O
ATOM 2 P C A1828 106.488 136.582 57.824 1.00 34.36 P
ATOM 3 OP1 C A1828 106.287 137.916 58.445 1.00 33.08 O
ATOM 4 OP2 C A1828 107.062 136.483 56.460 1.00 33.80 O
ATOM 5 O5' C A1828 107.360 135.695 58.819 1.00 33.90 O
ATOM 6 C5' C A1828 107.054 135.653 60.229 1.00 35.43 C
ATOM 7 C4' C A1828 107.801 134.521 60.900 1.00 35.65 C
ATOM 8 O4' C A1828 107.451 133.269 60.257 1.00 35.63 O
ATOM 9 C3' C A1828 109.315 134.569 60.789 1.00 36.75 C
ATOM 10 O3' C A1828 109.866 135.426 61.780 1.00 39.50 O
ATOM 11 C2' C A1828 109.702 133.113 60.997 1.00 35.05 C
ATOM 12 O2' C A1828 109.646 132.715 62.350 1.00 38.96 O
ATOM 13 C1' C A1828 108.571 132.402 60.259 1.00 32.59 C
ATOM 14 N1 C A1828 108.895 132.041 58.870 1.00 29.03 N
ATOM 15 C2 C A1828 109.715 130.928 58.644 1.00 26.82 C
ATOM 16 O2 C A1828 110.204 130.331 59.620 1.00 25.24 O
ATOM 17 N3 C A1828 109.967 130.543 57.374 1.00 24.95 N
ATOM 18 C4 C A1828 109.463 131.238 56.352 1.00 25.32 C
ATOM 19 N4 C A1828 109.738 130.815 55.115 1.00 24.79 N
ATOM 20 C5 C A1828 108.654 132.396 56.553 1.00 25.61 C
ATOM 21 C6 C A1828 108.396 132.757 57.815 1.00 26.12 C
ATOM 22 P U A1829 111.135 136.339 61.424 1.00 37.91 P
ATOM 23 OP1 U A1829 112.322 135.450 61.351 1.00 37.24 O
ATOM 24 OP2 U A1829 111.127 137.485 62.365 1.00 32.60 O
ATOM 25 O5' U A1829 110.822 136.854 59.954 1.00 36.57 O
TER
ATOM 1 O3' C B1828 109.866 135.426 61.780 1.00 39.50 O
ATOM 2 P U B1829 111.135 136.339 61.424 1.00 37.91 P
ATOM 3 OP1 U B1829 112.322 135.450 61.351 1.00 37.24 O
ATOM 4 OP2 U B1829 111.127 137.485 62.365 1.00 32.60 O
ATOM 5 O5' U B1829 110.822 136.854 59.954 1.00 36.57 O
ATOM 6 C5' U B1829 111.564 137.935 59.389 1.00 37.33 C
ATOM 7 C4' U B1829 111.765 137.716 57.917 1.00 34.50 C
ATOM 8 O4' U B1829 112.523 136.492 57.729 1.00 33.33 O
ATOM 9 C3' U B1829 110.491 137.555 57.096 1.00 35.76 C
ATOM 10 O3' U B1829 110.702 138.141 55.815 1.00 39.00 O
ATOM 11 C2' U B1829 110.397 136.039 56.934 1.00 35.53 C
ATOM 12 O2' U B1829 109.650 135.632 55.803 1.00 34.59 O
ATOM 13 C1' U B1829 111.872 135.692 56.771 1.00 34.04 C
ATOM 14 N1 U B1829 112.253 134.284 56.965 1.00 34.91 N
ATOM 15 C2 U B1829 112.319 133.491 55.839 1.00 35.03 C
ATOM 16 O2 U B1829 112.057 133.907 54.726 1.00 38.56 O
ATOM 17 N3 U B1829 112.700 132.190 56.061 1.00 34.64 N
ATOM 18 C4 U B1829 113.013 131.606 57.270 1.00 34.47 C
ATOM 19 O4 U B1829 113.357 130.417 57.303 1.00 31.92 O
ATOM 20 C5 U B1829 112.911 132.486 58.394 1.00 34.85 C
ATOM 21 C6 U B1829 112.542 133.765 58.209 1.00 35.97 C
ATOM 22 P C B1830 110.563 139.733 55.623 1.00 40.20 P
ATOM 23 OP1 C B1830 109.990 140.322 56.863 1.00 37.97 O
ATOM 24 OP2 C B1830 109.899 139.974 54.310 1.00 37.64 O
ATOM 25 O5' C B1830 112.071 140.233 55.534 1.00 40.51 O
TER
ATOM 2 P C A1828 106.488 136.582 57.824 1.00 34.36 P
ATOM 3 OP1 C A1828 106.287 137.916 58.445 1.00 33.08 O
ATOM 4 OP2 C A1828 107.062 136.483 56.460 1.00 33.80 O
ATOM 5 O5' C A1828 107.360 135.695 58.819 1.00 33.90 O
ATOM 6 C5' C A1828 107.054 135.653 60.229 1.00 35.43 C
ATOM 7 C4' C A1828 107.801 134.521 60.900 1.00 35.65 C
ATOM 8 O4' C A1828 107.451 133.269 60.257 1.00 35.63 O
ATOM 9 C3' C A1828 109.315 134.569 60.789 1.00 36.75 C
ATOM 10 O3' C A1828 109.866 135.426 61.780 1.00 39.50 O
ATOM 11 C2' C A1828 109.702 133.113 60.997 1.00 35.05 C
ATOM 12 O2' C A1828 109.646 132.715 62.350 1.00 38.96 O
ATOM 13 C1' C A1828 108.571 132.402 60.259 1.00 32.59 C
ATOM 14 N1 C A1828 108.895 132.041 58.870 1.00 29.03 N
ATOM 15 C2 C A1828 109.715 130.928 58.644 1.00 26.82 C
ATOM 16 O2 C A1828 110.204 130.331 59.620 1.00 25.24 O
ATOM 17 N3 C A1828 109.967 130.543 57.374 1.00 24.95 N
ATOM 18 C4 C A1828 109.463 131.238 56.352 1.00 25.32 C
ATOM 19 N4 C A1828 109.738 130.815 55.115 1.00 24.79 N
ATOM 20 C5 C A1828 108.654 132.396 56.553 1.00 25.61 C
ATOM 21 C6 C A1828 108.396 132.757 57.815 1.00 26.12 C
ATOM 22 P U A1829 111.135 136.339 61.424 1.00 37.91 P
ATOM 23 OP1 U A1829 112.322 135.450 61.351 1.00 37.24 O
ATOM 24 OP2 U A1829 111.127 137.485 62.365 1.00 32.60 O
ATOM 25 O5' U A1829 110.822 136.854 59.954 1.00 36.57 O
TER
ATOM 1 O3' C B1828 109.866 135.426 61.780 1.00 39.50 O
ATOM 2 P U B1829 111.135 136.339 61.424 1.00 37.91 P
ATOM 3 OP1 U B1829 112.322 135.450 61.351 1.00 37.24 O
ATOM 4 OP2 U B1829 111.127 137.485 62.365 1.00 32.60 O
ATOM 5 O5' U B1829 110.822 136.854 59.954 1.00 36.57 O
ATOM 6 C5' U B1829 111.564 137.935 59.389 1.00 37.33 C
ATOM 7 C4' U B1829 111.765 137.716 57.917 1.00 34.50 C
ATOM 8 O4' U B1829 112.523 136.492 57.729 1.00 33.33 O
ATOM 9 C3' U B1829 110.491 137.555 57.096 1.00 35.76 C
ATOM 10 O3' U B1829 110.702 138.141 55.815 1.00 39.00 O
ATOM 11 C2' U B1829 110.397 136.039 56.934 1.00 35.53 C
ATOM 12 O2' U B1829 109.650 135.632 55.803 1.00 34.59 O
ATOM 13 C1' U B1829 111.872 135.692 56.771 1.00 34.04 C
ATOM 14 N1 U B1829 112.253 134.284 56.965 1.00 34.91 N
ATOM 15 C2 U B1829 112.319 133.491 55.839 1.00 35.03 C
ATOM 16 O2 U B1829 112.057 133.907 54.726 1.00 38.56 O
ATOM 17 N3 U B1829 112.700 132.190 56.061 1.00 34.64 N
ATOM 18 C4 U B1829 113.013 131.606 57.270 1.00 34.47 C
ATOM 19 O4 U B1829 113.357 130.417 57.303 1.00 31.92 O
ATOM 20 C5 U B1829 112.911 132.486 58.394 1.00 34.85 C
ATOM 21 C6 U B1829 112.542 133.765 58.209 1.00 35.97 C
ATOM 22 P C B1830 110.563 139.733 55.623 1.00 40.20 P
ATOM 23 OP1 C B1830 109.990 140.322 56.863 1.00 37.97 O
ATOM 24 OP2 C B1830 109.899 139.974 54.310 1.00 37.64 O
ATOM 25 O5' C B1830 112.071 140.233 55.534 1.00 40.51 O
TER
Atoms:
C2: (109.715,130.928,58.644)
OP1: (106.287,137.916,58.445)
OP2: (107.062,136.483,56.460)
C4: (109.463,131.238,56.352)
O5': (107.360,135.695,58.819)
C3': (109.315,134.569,60.789)
C1': (108.571,132.402,60.259)
O4': (107.451,133.269,60.257)
C5': (107.054,135.653,60.229)
P: (106.488,136.582,57.824)
O2: (110.204,130.331,59.620)
C4': (107.801,134.521,60.900)
C2': (109.702,133.113,60.997)
O2': (109.646,132.715,62.350)
N1: (108.895,132.041,58.870)
N3: (109.967,130.543,57.374)
N4: (109.738,130.815,55.115)
C6: (108.396,132.757,57.815)
C5: (108.654,132.396,56.553)
O3': (109.866,135.426,61.780)
OP1: (106.287,137.916,58.445)
OP2: (107.062,136.483,56.460)
C4: (109.463,131.238,56.352)
O5': (107.360,135.695,58.819)
C3': (109.315,134.569,60.789)
C1': (108.571,132.402,60.259)
O4': (107.451,133.269,60.257)
C5': (107.054,135.653,60.229)
P: (106.488,136.582,57.824)
O2: (110.204,130.331,59.620)
C4': (107.801,134.521,60.900)
C2': (109.702,133.113,60.997)
O2': (109.646,132.715,62.350)
N1: (108.895,132.041,58.870)
N3: (109.967,130.543,57.374)
N4: (109.738,130.815,55.115)
C6: (108.396,132.757,57.815)
C5: (108.654,132.396,56.553)
O3': (109.866,135.426,61.780)
C4: (113.013,131.606,57.270)
N3: (112.700,132.190,56.061)
OP1: (112.322,135.450,61.351)
OP2: (111.127,137.485,62.365)
C2: (112.319,133.491,55.839)
C1': (111.872,135.692,56.771)
C3': (110.491,137.555,57.096)
O5': (110.822,136.854,59.954)
O4': (112.523,136.492,57.729)
C5': (111.564,137.935,59.389)
P: (111.135,136.339,61.424)
C4': (111.765,137.716,57.917)
C2': (110.397,136.039,56.934)
O2': (109.650,135.632,55.803)
N1: (112.253,134.284,56.965)
O4: (113.357,130.417,57.303)
O2: (112.057,133.907,54.726)
C6: (112.542,133.765,58.209)
C5: (112.911,132.486,58.394)
O3': (110.702,138.141,55.815)
N3: (112.700,132.190,56.061)
OP1: (112.322,135.450,61.351)
OP2: (111.127,137.485,62.365)
C2: (112.319,133.491,55.839)
C1': (111.872,135.692,56.771)
C3': (110.491,137.555,57.096)
O5': (110.822,136.854,59.954)
O4': (112.523,136.492,57.729)
C5': (111.564,137.935,59.389)
P: (111.135,136.339,61.424)
C4': (111.765,137.716,57.917)
C2': (110.397,136.039,56.934)
O2': (109.650,135.632,55.803)
N1: (112.253,134.284,56.965)
O4: (113.357,130.417,57.303)
O2: (112.057,133.907,54.726)
C6: (112.542,133.765,58.209)
C5: (112.911,132.486,58.394)
O3': (110.702,138.141,55.815)
Image (generated by PyMOL):