Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2232:A2231
Extra
PDB:
ATOM 1 O3' U A2231 63.522 75.120 81.725 1.00 42.16 O
ATOM 2 P C A2232 62.924 76.592 81.701 1.00 42.08 P
ATOM 3 OP1 C A2232 63.258 77.187 80.389 1.00 40.51 O
ATOM 4 OP2 C A2232 63.441 77.190 82.943 1.00 43.13 O
ATOM 5 O5' C A2232 61.348 76.391 81.809 1.00 42.37 O
ATOM 6 C5' C A2232 60.515 77.422 82.356 1.00 42.04 C
ATOM 7 C4' C A2232 59.114 77.300 81.815 1.00 44.31 C
ATOM 8 O4' C A2232 59.129 77.462 80.370 1.00 44.22 O
ATOM 9 C3' C A2232 58.467 75.947 82.070 1.00 44.28 C
ATOM 10 O3' C A2232 57.067 76.132 82.226 1.00 43.27 O
ATOM 11 C2' C A2232 58.784 75.197 80.786 1.00 44.77 C
ATOM 12 O2' C A2232 57.919 74.129 80.508 1.00 44.36 O
ATOM 13 C1' C A2232 58.602 76.308 79.765 1.00 45.13 C
ATOM 14 N1 C A2232 59.310 76.089 78.508 1.00 46.99 N
ATOM 15 C2 C A2232 58.591 75.595 77.419 1.00 48.29 C
ATOM 16 O2 C A2232 57.393 75.304 77.575 1.00 49.87 O
ATOM 17 N3 C A2232 59.213 75.447 76.231 1.00 47.70 N
ATOM 18 C4 C A2232 60.504 75.768 76.115 1.00 47.28 C
ATOM 19 N4 C A2232 61.068 75.643 74.922 1.00 47.89 N
ATOM 20 C5 C A2232 61.270 76.240 77.221 1.00 47.19 C
ATOM 21 C6 C A2232 60.639 76.380 78.388 1.00 47.23 C
ATOM 22 P C A2233 56.441 76.207 83.703 1.00 43.50 P
ATOM 23 OP1 C A2233 55.811 77.553 83.875 1.00 44.62 O
ATOM 24 OP2 C A2233 57.509 75.793 84.640 1.00 42.42 O
ATOM 25 O5' C A2233 55.311 75.078 83.690 1.00 42.31 O
TER
ATOM 1 O3' U B2230 59.957 70.216 82.549 1.00 41.34 O
ATOM 2 P U B2231 59.649 71.794 82.475 1.00 40.98 P
ATOM 3 OP1 U B2231 59.617 72.265 83.868 1.00 40.70 O
ATOM 4 OP2 U B2231 58.502 72.078 81.583 1.00 41.10 O
ATOM 5 O5' U B2231 60.941 72.392 81.779 1.00 41.99 O
ATOM 6 C5' U B2231 62.221 72.348 82.416 1.00 41.81 C
ATOM 7 C4' U B2231 63.273 72.787 81.434 1.00 42.77 C
ATOM 8 O4' U B2231 63.223 71.923 80.279 1.00 43.34 O
ATOM 9 C3' U B2231 63.021 74.157 80.847 1.00 42.55 C
ATOM 10 O3' U B2231 63.522 75.120 81.725 1.00 42.16 O
ATOM 11 C2' U B2231 63.787 74.100 79.544 1.00 43.27 C
ATOM 12 O2' U B2231 65.177 74.221 79.741 1.00 45.28 O
ATOM 13 C1' U B2231 63.483 72.674 79.111 1.00 43.41 C
ATOM 14 N1 U B2231 62.297 72.639 78.253 1.00 43.83 N
ATOM 15 C2 U B2231 62.527 72.722 76.916 1.00 44.38 C
ATOM 16 O2 U B2231 63.637 72.868 76.457 1.00 45.30 O
ATOM 17 N3 U B2231 61.414 72.655 76.136 1.00 44.19 N
ATOM 18 C4 U B2231 60.113 72.550 76.561 1.00 44.42 C
ATOM 19 O4 U B2231 59.214 72.530 75.730 1.00 44.36 O
ATOM 20 C5 U B2231 59.943 72.498 77.977 1.00 44.25 C
ATOM 21 C6 U B2231 61.016 72.533 78.757 1.00 44.03 C
ATOM 22 P C B2232 62.924 76.592 81.701 1.00 42.08 P
ATOM 23 OP1 C B2232 63.258 77.187 80.389 1.00 40.51 O
ATOM 24 OP2 C B2232 63.441 77.190 82.943 1.00 43.13 O
ATOM 25 O5' C B2232 61.348 76.391 81.809 1.00 42.37 O
TER
ATOM 2 P C A2232 62.924 76.592 81.701 1.00 42.08 P
ATOM 3 OP1 C A2232 63.258 77.187 80.389 1.00 40.51 O
ATOM 4 OP2 C A2232 63.441 77.190 82.943 1.00 43.13 O
ATOM 5 O5' C A2232 61.348 76.391 81.809 1.00 42.37 O
ATOM 6 C5' C A2232 60.515 77.422 82.356 1.00 42.04 C
ATOM 7 C4' C A2232 59.114 77.300 81.815 1.00 44.31 C
ATOM 8 O4' C A2232 59.129 77.462 80.370 1.00 44.22 O
ATOM 9 C3' C A2232 58.467 75.947 82.070 1.00 44.28 C
ATOM 10 O3' C A2232 57.067 76.132 82.226 1.00 43.27 O
ATOM 11 C2' C A2232 58.784 75.197 80.786 1.00 44.77 C
ATOM 12 O2' C A2232 57.919 74.129 80.508 1.00 44.36 O
ATOM 13 C1' C A2232 58.602 76.308 79.765 1.00 45.13 C
ATOM 14 N1 C A2232 59.310 76.089 78.508 1.00 46.99 N
ATOM 15 C2 C A2232 58.591 75.595 77.419 1.00 48.29 C
ATOM 16 O2 C A2232 57.393 75.304 77.575 1.00 49.87 O
ATOM 17 N3 C A2232 59.213 75.447 76.231 1.00 47.70 N
ATOM 18 C4 C A2232 60.504 75.768 76.115 1.00 47.28 C
ATOM 19 N4 C A2232 61.068 75.643 74.922 1.00 47.89 N
ATOM 20 C5 C A2232 61.270 76.240 77.221 1.00 47.19 C
ATOM 21 C6 C A2232 60.639 76.380 78.388 1.00 47.23 C
ATOM 22 P C A2233 56.441 76.207 83.703 1.00 43.50 P
ATOM 23 OP1 C A2233 55.811 77.553 83.875 1.00 44.62 O
ATOM 24 OP2 C A2233 57.509 75.793 84.640 1.00 42.42 O
ATOM 25 O5' C A2233 55.311 75.078 83.690 1.00 42.31 O
TER
ATOM 1 O3' U B2230 59.957 70.216 82.549 1.00 41.34 O
ATOM 2 P U B2231 59.649 71.794 82.475 1.00 40.98 P
ATOM 3 OP1 U B2231 59.617 72.265 83.868 1.00 40.70 O
ATOM 4 OP2 U B2231 58.502 72.078 81.583 1.00 41.10 O
ATOM 5 O5' U B2231 60.941 72.392 81.779 1.00 41.99 O
ATOM 6 C5' U B2231 62.221 72.348 82.416 1.00 41.81 C
ATOM 7 C4' U B2231 63.273 72.787 81.434 1.00 42.77 C
ATOM 8 O4' U B2231 63.223 71.923 80.279 1.00 43.34 O
ATOM 9 C3' U B2231 63.021 74.157 80.847 1.00 42.55 C
ATOM 10 O3' U B2231 63.522 75.120 81.725 1.00 42.16 O
ATOM 11 C2' U B2231 63.787 74.100 79.544 1.00 43.27 C
ATOM 12 O2' U B2231 65.177 74.221 79.741 1.00 45.28 O
ATOM 13 C1' U B2231 63.483 72.674 79.111 1.00 43.41 C
ATOM 14 N1 U B2231 62.297 72.639 78.253 1.00 43.83 N
ATOM 15 C2 U B2231 62.527 72.722 76.916 1.00 44.38 C
ATOM 16 O2 U B2231 63.637 72.868 76.457 1.00 45.30 O
ATOM 17 N3 U B2231 61.414 72.655 76.136 1.00 44.19 N
ATOM 18 C4 U B2231 60.113 72.550 76.561 1.00 44.42 C
ATOM 19 O4 U B2231 59.214 72.530 75.730 1.00 44.36 O
ATOM 20 C5 U B2231 59.943 72.498 77.977 1.00 44.25 C
ATOM 21 C6 U B2231 61.016 72.533 78.757 1.00 44.03 C
ATOM 22 P C B2232 62.924 76.592 81.701 1.00 42.08 P
ATOM 23 OP1 C B2232 63.258 77.187 80.389 1.00 40.51 O
ATOM 24 OP2 C B2232 63.441 77.190 82.943 1.00 43.13 O
ATOM 25 O5' C B2232 61.348 76.391 81.809 1.00 42.37 O
TER
Atoms:
C2: (58.591,75.595,77.419)
OP1: (63.258,77.187,80.389)
OP2: (63.441,77.190,82.943)
C4: (60.504,75.768,76.115)
O5': (61.348,76.391,81.809)
C3': (58.467,75.947,82.070)
C1': (58.602,76.308,79.765)
O4': (59.129,77.462,80.370)
C5': (60.515,77.422,82.356)
P: (62.924,76.592,81.701)
O2: (57.393,75.304,77.575)
C4': (59.114,77.300,81.815)
C2': (58.784,75.197,80.786)
O2': (57.919,74.129,80.508)
N1: (59.310,76.089,78.508)
N3: (59.213,75.447,76.231)
N4: (61.068,75.643,74.922)
C6: (60.639,76.380,78.388)
C5: (61.270,76.240,77.221)
O3': (57.067,76.132,82.226)
OP1: (63.258,77.187,80.389)
OP2: (63.441,77.190,82.943)
C4: (60.504,75.768,76.115)
O5': (61.348,76.391,81.809)
C3': (58.467,75.947,82.070)
C1': (58.602,76.308,79.765)
O4': (59.129,77.462,80.370)
C5': (60.515,77.422,82.356)
P: (62.924,76.592,81.701)
O2: (57.393,75.304,77.575)
C4': (59.114,77.300,81.815)
C2': (58.784,75.197,80.786)
O2': (57.919,74.129,80.508)
N1: (59.310,76.089,78.508)
N3: (59.213,75.447,76.231)
N4: (61.068,75.643,74.922)
C6: (60.639,76.380,78.388)
C5: (61.270,76.240,77.221)
O3': (57.067,76.132,82.226)
C4: (60.113,72.550,76.561)
N3: (61.414,72.655,76.136)
OP1: (59.617,72.265,83.868)
OP2: (58.502,72.078,81.583)
C2: (62.527,72.722,76.916)
C1': (63.483,72.674,79.111)
C3': (63.021,74.157,80.847)
O5': (60.941,72.392,81.779)
O4': (63.223,71.923,80.279)
C5': (62.221,72.348,82.416)
P: (59.649,71.794,82.475)
C4': (63.273,72.787,81.434)
C2': (63.787,74.100,79.544)
O2': (65.177,74.221,79.741)
N1: (62.297,72.639,78.253)
O4: (59.214,72.530,75.730)
O2: (63.637,72.868,76.457)
C6: (61.016,72.533,78.757)
C5: (59.943,72.498,77.977)
O3': (63.522,75.120,81.725)
N3: (61.414,72.655,76.136)
OP1: (59.617,72.265,83.868)
OP2: (58.502,72.078,81.583)
C2: (62.527,72.722,76.916)
C1': (63.483,72.674,79.111)
C3': (63.021,74.157,80.847)
O5': (60.941,72.392,81.779)
O4': (63.223,71.923,80.279)
C5': (62.221,72.348,82.416)
P: (59.649,71.794,82.475)
C4': (63.273,72.787,81.434)
C2': (63.787,74.100,79.544)
O2': (65.177,74.221,79.741)
N1: (62.297,72.639,78.253)
O4: (59.214,72.530,75.730)
O2: (63.637,72.868,76.457)
C6: (61.016,72.533,78.757)
C5: (59.943,72.498,77.977)
O3': (63.522,75.120,81.725)
Image (generated by PyMOL):